RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ANGPTL3Q9Y5C1 460 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 FSIP1Q8NA03 581 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 TRIM4Q9C037 500 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 COPG1Q9Y678 874 aaKnown RBP9.93□□□□□ -0.82
SYNE3-205ENST00000557275 HIP1RO75146 1068 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 ZNF131P52739 623 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 MUM1Q2TAK8 710 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 DUSP27Q5VZP5 1158 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 NONOQ15233 471 aaKnown RBP eCLIP9.93□□□□□ -0.82
SYNE3-205ENST00000557275 MMRN2Q9H8L6 949 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 VPS18Q9P253 973 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 XPCQ01831 940 aaPredicted RBP9.93□□□□□ -0.82
SYNE3-205ENST00000557275 NUTM2FA1L443 756 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 XAB2Q9HCS7 855 aaKnown RBP9.93□□□□□ -0.82
SYNE3-205ENST00000557275 SRGAP3O43295 1099 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 MAN1A2O60476 641 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 P3H4Q92791 437 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 CCDC42Q96M95 316 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 TMOD4Q9NZQ9 345 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 BAG5Q9UL15 447 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 FAF1Q9UNN5 650 aaPredicted RBP9.93□□□□□ -0.82
SYNE3-205ENST00000557275 ABCC11Q96J66 1382 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 ATP2C2O75185 946 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 KIF11P52732 1056 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 DACT3Q96B18 629 aaPredicted RBP9.93□□□□□ -0.82
SYNE3-205ENST00000557275 PPP4R1Q8TF05 950 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 PFDN1O60925 122 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 HAUS7Q99871 368 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 FAM8A1Q9UBU6 413 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 STK24Q9Y6E0 443 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.92□□□□□ -0.82
SYNE3-205ENST00000557275 ESRRGP62508 458 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 NKTRP30414 1462 aaKnown RBP9.92□□□□□ -0.82
SYNE3-205ENST00000557275 NLRP2Q9NX02 1062 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 TRMT1Q9NXH9 659 aaKnown RBP9.92□□□□□ -0.82
SYNE3-205ENST00000557275 CTTNBP2NLQ9P2B4 639 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 IFIT1P09914 478 aaKnown RBP9.92□□□□□ -0.82
SYNE3-205ENST00000557275 SMIM24O75264 130 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 ZNF354CQ86Y25 554 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 MYH10P35580 1976 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 RPL13P26373 211 aaKnown RBP9.92□□□□□ -0.82
SYNE3-205ENST00000557275 PPFIA4O75335 1185 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 STAT6P42226 847 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 PLCB3Q01970 1234 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 RASEFQ8IZ41 740 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 GCKP35557 465 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 GNAQP50148 359 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 SPTY2D1Q68D10 685 aaPredicted RBP9.91□□□□□ -0.82
SYNE3-205ENST00000557275 ZNF444Q8N0Y2 327 aaPredicted RBP9.91□□□□□ -0.82
SYNE3-205ENST00000557275 TRIML1Q8N9V2 468 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 SYKP43405 635 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 RIOK3O14730 519 aaKnown RBP9.91□□□□□ -0.82
SYNE3-205ENST00000557275 PHACTR2O75167 634 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 MX1P20591 662 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 PODNQ7Z5L7 613 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 CCDC125Q86Z20 511 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 TATP17735 454 aaPredicted RBP9.91□□□□□ -0.82
SYNE3-205ENST00000557275 PDXDC1Q6P996 788 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 PFDN6O15212 129 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 ANKRD20A3Q5VUR7 823 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 GOLGA8CPA6NN73 597 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 BAG3O95817 575 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 KCNK9Q9NPC2 374 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 E7EVH7 732 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 SCINQ9Y6U3 715 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 HS2ST1Q7LGA3 356 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 GFAPP14136 432 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 NEK11Q8NG66 645 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 TRERF1Q96PN7 1200 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 STARD3NLO95772 234 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 SYT1P21579 422 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 CNNM2Q9H8M5 875 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 ANKFY1Q9P2R3 1169 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 LRRD1A4D1F6 860 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 ZNF213O14771 459 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 PHEXP78562 749 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 SYCE1Q8N0S2 351 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 NEK1Q96PY6 1258 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 ZNF692Q9BU19 519 aaPredicted RBP9.9□□□□□ -0.82
SYNE3-205ENST00000557275 RNASELQ05823 741 aaKnown RBP9.9□□□□□ -0.82
SYNE3-205ENST00000557275 POLR3DP05423 398 aaPredicted RBP9.9□□□□□ -0.82
SYNE3-205ENST00000557275 NOLC1Q14978 699 aaKnown RBP eCLIP9.9□□□□□ -0.82
SYNE3-205ENST00000557275 MINK1Q8N4C8 1332 aaPredicted RBP9.9□□□□□ -0.82
SYNE3-205ENST00000557275 CALML3P27482 149 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 SLMAPQ14BN4 828 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 SLC4A2P04920 1241 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 EVI5LQ96CN4 794 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 SAMM50Q9Y512 469 aa9.9□□□□□ -0.83
SYNE3-205ENST00000557275 FNBP4Q8N3X1 1017 aaPredicted RBP9.9□□□□□ -0.83
SYNE3-205ENST00000557275 HFM1A2PYH4 1435 aa9.9□□□□□ -0.83
SYNE3-205ENST00000557275 CALM1P0DP23 149 aa9.9□□□□□ -0.83
SYNE3-205ENST00000557275 CALM2P0DP24 149 aa9.9□□□□□ -0.83
SYNE3-205ENST00000557275 CALM3P0DP25 149 aa9.9□□□□□ -0.83
SYNE3-205ENST00000557275 MAIP1Q8WWC4 291 aa9.9□□□□□ -0.83
SYNE3-205ENST00000557275 HLA-DOAP06340 250 aa9.89□□□□□ -0.83
SYNE3-205ENST00000557275 TROVE2P10155 538 aaKnown RBP eCLIP9.89□□□□□ -0.83
SYNE3-205ENST00000557275 ALDH1L2Q3SY69 923 aa9.89□□□□□ -0.83
SYNE3-205ENST00000557275 UBLCP1Q8WVY7 318 aaPredicted RBP9.89□□□□□ -0.83
SYNE3-205ENST00000557275 PPP1R9AQ9ULJ8 1098 aa9.89□□□□□ -0.83
SYNE3-205ENST00000557275 HEATR3Q7Z4Q2 680 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms