RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 SLC4A8Q2Y0W8 1093 aa17.46■□□□□ 0.39
ABCD4-224ENST00000556119 NBPF11Q86T75 865 aa17.46■□□□□ 0.39
ABCD4-224ENST00000556119 MXD3Q9BW11 206 aa17.46■□□□□ 0.39
ABCD4-224ENST00000556119 PRO3102Q9H379 93 aa17.46■□□□□ 0.39
ABCD4-224ENST00000556119 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.46■□□□□ 0.39
ABCD4-224ENST00000556119 SLC9C1Q4G0N8 1177 aa17.45■□□□□ 0.38
ABCD4-224ENST00000556119 WNK4Q96J92 1243 aa17.45■□□□□ 0.38
ABCD4-224ENST00000556119 CLMNQ96JQ2 1002 aa17.45■□□□□ 0.38
ABCD4-224ENST00000556119 SEC31BQ9NQW1 1179 aa17.45■□□□□ 0.38
ABCD4-224ENST00000556119 PTCH2Q9Y6C5 1203 aa17.45■□□□□ 0.38
ABCD4-224ENST00000556119 WTIPA6NIX2 430 aaPredicted RBP17.44■□□□□ 0.38
ABCD4-224ENST00000556119 MYCP01106 439 aaPredicted RBP17.44■□□□□ 0.38
ABCD4-224ENST00000556119 RTL5Q5HYW3 569 aaPredicted RBP17.44■□□□□ 0.38
ABCD4-224ENST00000556119 PODNQ7Z5L7 613 aa17.44■□□□□ 0.38
ABCD4-224ENST00000556119 PTPN18Q99952 460 aa17.44■□□□□ 0.38
ABCD4-224ENST00000556119 SASH1O94885 1247 aa17.43■□□□□ 0.38
ABCD4-224ENST00000556119 MAP3K11Q16584 847 aa17.43■□□□□ 0.38
ABCD4-224ENST00000556119 OGFOD1Q8N543 542 aa17.43■□□□□ 0.38
ABCD4-224ENST00000556119 ISCA1Q9BUE6 129 aa17.43■□□□□ 0.38
ABCD4-224ENST00000556119 VCANP13611 3396 aa17.42■□□□□ 0.38
ABCD4-224ENST00000556119 DACT2Q5SW24 774 aa17.42■□□□□ 0.38
ABCD4-224ENST00000556119 DPF3Q92784 378 aa17.42■□□□□ 0.38
ABCD4-224ENST00000556119 ATP5J2-PTCD1G3V325 749 aa17.41■□□□□ 0.38
ABCD4-224ENST00000556119 IRS4O14654 1257 aaPredicted RBP17.41■□□□□ 0.38
ABCD4-224ENST00000556119 OTUD7BQ6GQQ9 843 aa17.41■□□□□ 0.38
ABCD4-224ENST00000556119 APOBEC3FQ8IUX4 373 aaKnown RBP17.41■□□□□ 0.38
ABCD4-224ENST00000556119 TSPYL4Q9UJ04 414 aa17.41■□□□□ 0.38
ABCD4-224ENST00000556119 SOX1O00570 391 aaPredicted RBP17.4■□□□□ 0.38
ABCD4-224ENST00000556119 GJA5P36382 358 aa17.4■□□□□ 0.38
ABCD4-224ENST00000556119 ZBED3Q96IU2 234 aaPredicted RBP17.4■□□□□ 0.38
ABCD4-224ENST00000556119 SSC5DA1L4H1 1573 aa17.4■□□□□ 0.38
ABCD4-224ENST00000556119 ZSWIM8A7E2V4 1837 aa17.4■□□□□ 0.38
ABCD4-224ENST00000556119 TESPA1A2RU30 521 aaPredicted RBP17.39■□□□□ 0.37
ABCD4-224ENST00000556119 SH3TC2Q8TF17 1288 aa17.39■□□□□ 0.37
ABCD4-224ENST00000556119 XDHP47989 1333 aa17.39■□□□□ 0.37
ABCD4-224ENST00000556119 PPP2R1AP30153 589 aa17.38■□□□□ 0.37
ABCD4-224ENST00000556119 NFE2L2Q16236 605 aa17.38■□□□□ 0.37
ABCD4-224ENST00000556119 PLBD2Q8NHP8 589 aa17.38■□□□□ 0.37
ABCD4-224ENST00000556119 SHISA4Q96DD7 197 aa17.38■□□□□ 0.37
ABCD4-224ENST00000556119 LRCH3Q96II8 777 aa17.38■□□□□ 0.37
ABCD4-224ENST00000556119 PLEKHF1Q96S99 279 aa17.38■□□□□ 0.37
ABCD4-224ENST00000556119 DEFB129Q9H1M3 183 aa17.38■□□□□ 0.37
ABCD4-224ENST00000556119 PPP1R12BO60237 982 aaPredicted RBP17.37■□□□□ 0.37
ABCD4-224ENST00000556119 ARHGEF6Q15052 776 aa17.37■□□□□ 0.37
ABCD4-224ENST00000556119 ANKRD13DQ6ZTN6 518 aa17.37■□□□□ 0.37
ABCD4-224ENST00000556119 ECM29Q5VYK3 1845 aa17.36■□□□□ 0.37
ABCD4-224ENST00000556119 UNCXA6NJT0 531 aa17.36■□□□□ 0.37
ABCD4-224ENST00000556119 NEFMP07197 916 aa17.36■□□□□ 0.37
ABCD4-224ENST00000556119 ATP2B4P23634 1241 aa17.36■□□□□ 0.37
ABCD4-224ENST00000556119 MMP14P50281 582 aa17.36■□□□□ 0.37
ABCD4-224ENST00000556119 STRIP1Q5VSL9 837 aa17.36■□□□□ 0.37
ABCD4-224ENST00000556119 FBXW7Q969H0 707 aa17.36■□□□□ 0.37
ABCD4-224ENST00000556119 MYO3BQ8WXR4 1341 aa17.36■□□□□ 0.37
ABCD4-224ENST00000556119 COL1A1P02452 1464 aaPredicted RBP17.36■□□□□ 0.37
ABCD4-224ENST00000556119 TRIM28Q13263 835 aaKnown RBP17.35■□□□□ 0.37
ABCD4-224ENST00000556119 OTOFQ9HC10 1997 aa17.35■□□□□ 0.37
ABCD4-224ENST00000556119 USP2O75604 605 aaPredicted RBP17.34■□□□□ 0.37
ABCD4-224ENST00000556119 UBE2Q1Q7Z7E8 422 aa17.34■□□□□ 0.37
ABCD4-224ENST00000556119 KIAA0825Q8IV33 1275 aa17.34■□□□□ 0.37
ABCD4-224ENST00000556119 MS4A4AQ96JQ5 239 aa17.34■□□□□ 0.37
ABCD4-224ENST00000556119 CLSPNQ9HAW4 1339 aa17.34■□□□□ 0.37
ABCD4-224ENST00000556119 CHPF2Q9P2E5 772 aa17.34■□□□□ 0.37
ABCD4-224ENST00000556119 MED23Q9ULK4 1368 aa17.34■□□□□ 0.37
ABCD4-224ENST00000556119 SPTBN5Q9NRC6 3674 aaKnown RBP17.34■□□□□ 0.37
ABCD4-224ENST00000556119 A0A1W2PPC1 479 aa17.33■□□□□ 0.36
ABCD4-224ENST00000556119 MTFR1Q15390 333 aa17.33■□□□□ 0.36
ABCD4-224ENST00000556119 ZBTB7BO15156 539 aaPredicted RBP17.32■□□□□ 0.36
ABCD4-224ENST00000556119 KRT24Q2M2I5 525 aa17.32■□□□□ 0.36
ABCD4-224ENST00000556119 CCDC152Q4G0S7 254 aa17.32■□□□□ 0.36
ABCD4-224ENST00000556119 NBPF12Q5TAG4 269 aaPredicted RBP17.32■□□□□ 0.36
ABCD4-224ENST00000556119 TXNRD3Q86VQ6 643 aa17.32■□□□□ 0.36
ABCD4-224ENST00000556119 ZBTB38Q8NAP3 1195 aaPredicted RBP17.32■□□□□ 0.36
ABCD4-224ENST00000556119 CCDC85AQ96PX6 553 aaPredicted RBP17.32■□□□□ 0.36
ABCD4-224ENST00000556119 COL25A1Q9BXS0 654 aaPredicted RBP17.32■□□□□ 0.36
ABCD4-224ENST00000556119 ARHGAP39Q9C0H5 1083 aa17.32■□□□□ 0.36
ABCD4-224ENST00000556119 ZFYVE28Q9HCC9 887 aa17.32■□□□□ 0.36
ABCD4-224ENST00000556119 SPEF2Q9C093 1822 aa17.32■□□□□ 0.36
ABCD4-224ENST00000556119 IREB2P48200 963 aaKnown RBP17.31■□□□□ 0.36
ABCD4-224ENST00000556119 TAF1CQ15572 869 aaPredicted RBP17.31■□□□□ 0.36
ABCD4-224ENST00000556119 TTLL5Q6EMB2 1281 aa17.31■□□□□ 0.36
ABCD4-224ENST00000556119 ANKRD18AQ8IVF6 992 aa17.31■□□□□ 0.36
ABCD4-224ENST00000556119 BRI3BPQ8WY22 251 aa17.31■□□□□ 0.36
ABCD4-224ENST00000556119 HTATIP2Q9BUP3 242 aa17.31■□□□□ 0.36
ABCD4-224ENST00000556119 BABAM1Q9NWV8 329 aa17.31■□□□□ 0.36
ABCD4-224ENST00000556119 NR2E3Q9Y5X4 410 aa17.31■□□□□ 0.36
ABCD4-224ENST00000556119 SUPT20HL1Q3ZLR7 823 aa17.3■□□□□ 0.36
ABCD4-224ENST00000556119 ANKRD13AQ8IZ07 590 aa17.3■□□□□ 0.36
ABCD4-224ENST00000556119 OPTNQ96CV9 577 aa17.3■□□□□ 0.36
ABCD4-224ENST00000556119 COA1Q9GZY4 146 aa17.3■□□□□ 0.36
ABCD4-224ENST00000556119 PCDHAC2Q9Y5I4 1007 aa17.3■□□□□ 0.36
ABCD4-224ENST00000556119 PPP2R3BQ9Y5P8 575 aa17.3■□□□□ 0.36
ABCD4-224ENST00000556119 FAM43AQ8N2R8 423 aa17.29■□□□□ 0.36
ABCD4-224ENST00000556119 ELP3Q9H9T3 547 aa17.29■□□□□ 0.36
ABCD4-224ENST00000556119 MINPP1Q9UNW1 487 aa17.29■□□□□ 0.36
ABCD4-224ENST00000556119 PDE8AO60658 829 aa17.28■□□□□ 0.36
ABCD4-224ENST00000556119 GJA8P48165 433 aa17.28■□□□□ 0.36
ABCD4-224ENST00000556119 CCT4P50991 539 aaKnown RBP17.28■□□□□ 0.36
ABCD4-224ENST00000556119 DLGAP5Q15398 846 aa17.28■□□□□ 0.36
ABCD4-224ENST00000556119 MTMR14Q8NCE2 650 aa17.28■□□□□ 0.36
ABCD4-224ENST00000556119 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms