RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 RTFDC1Q9BY42 306 aaPredicted RBP15.36■□□□□ 0.05
ABCD4-223ENST00000555904 LNPKQ9C0E8 428 aa15.36■□□□□ 0.05
ABCD4-223ENST00000555904 POLLQ9UGP5 575 aa15.36■□□□□ 0.05
ABCD4-223ENST00000555904 MED23Q9ULK4 1368 aa15.36■□□□□ 0.05
ABCD4-223ENST00000555904 SRCAPQ6ZRS2 3230 aa15.35■□□□□ 0.05
ABCD4-223ENST00000555904 GRIN3BO60391 1043 aa15.35■□□□□ 0.05
ABCD4-223ENST00000555904 YBX3P16989 372 aaKnown RBP eCLIP15.35■□□□□ 0.05
ABCD4-223ENST00000555904 FGFR2P21802 821 aa15.35■□□□□ 0.05
ABCD4-223ENST00000555904 VPS33BQ9H267 617 aa15.35■□□□□ 0.05
ABCD4-223ENST00000555904 ARFGEF1Q9Y6D6 1849 aa15.35■□□□□ 0.05
ABCD4-223ENST00000555904 LTBP3Q9NS15 1303 aa15.35■□□□□ 0.05
ABCD4-223ENST00000555904 DUOX1Q9NRD9 1551 aa15.34■□□□□ 0.05
ABCD4-223ENST00000555904 TIMM10P62072 90 aa15.34■□□□□ 0.05
ABCD4-223ENST00000555904 CCDC158Q5M9N0 1113 aa15.34■□□□□ 0.05
ABCD4-223ENST00000555904 EAF2Q96CJ1 260 aaPredicted RBP15.34■□□□□ 0.05
ABCD4-223ENST00000555904 XAGE2Q96GT9 111 aa15.34■□□□□ 0.05
ABCD4-223ENST00000555904 GNL3LQ9NVN8 582 aaKnown RBP15.34■□□□□ 0.05
ABCD4-223ENST00000555904 LTBP1Q14766 1721 aa15.34■□□□□ 0.05
ABCD4-223ENST00000555904 A0A1B0GUL6 1792 aa15.34■□□□□ 0.05
ABCD4-223ENST00000555904 SNED1Q8TER0 1413 aa15.34■□□□□ 0.05
ABCD4-223ENST00000555904 SNAP23O00161 211 aa15.33■□□□□ 0.04
ABCD4-223ENST00000555904 RIMBP2O15034 1052 aa15.33■□□□□ 0.04
ABCD4-223ENST00000555904 PPIP5K2O43314 1243 aa15.33■□□□□ 0.04
ABCD4-223ENST00000555904 C15orf52Q6ZUT6 534 aaKnown RBP15.33■□□□□ 0.04
ABCD4-223ENST00000555904 CCDC8Q9H0W5 538 aaPredicted RBP15.33■□□□□ 0.04
ABCD4-223ENST00000555904 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.33■□□□□ 0.04
ABCD4-223ENST00000555904 NFKBIEO00221 500 aa15.32■□□□□ 0.04
ABCD4-223ENST00000555904 FRAT2O75474 233 aaPredicted RBP15.32■□□□□ 0.04
ABCD4-223ENST00000555904 HIBADHP31937 336 aaKnown RBP15.32■□□□□ 0.04
ABCD4-223ENST00000555904 KIAA2012Q0VF49 1180 aa15.32■□□□□ 0.04
ABCD4-223ENST00000555904 AOC3Q16853 763 aa15.32■□□□□ 0.04
ABCD4-223ENST00000555904 TTC39AQ5SRH9 613 aa15.32■□□□□ 0.04
ABCD4-223ENST00000555904 LARGE2Q8N3Y3 721 aa15.32■□□□□ 0.04
ABCD4-223ENST00000555904 JDP2Q8WYK2 163 aa15.32■□□□□ 0.04
ABCD4-223ENST00000555904 GPR101Q96P66 508 aaPredicted RBP15.32■□□□□ 0.04
ABCD4-223ENST00000555904 ZNF277Q9NRM2 450 aaPredicted RBP15.32■□□□□ 0.04
ABCD4-223ENST00000555904 DBNLQ9UJU6 430 aaKnown RBP15.32■□□□□ 0.04
ABCD4-223ENST00000555904 WTIPA6NIX2 430 aaPredicted RBP15.31■□□□□ 0.04
ABCD4-223ENST00000555904 MX1P20591 662 aa15.31■□□□□ 0.04
ABCD4-223ENST00000555904 KLRK1P26718 216 aa15.31■□□□□ 0.04
ABCD4-223ENST00000555904 ADORA1P30542 326 aa15.31■□□□□ 0.04
ABCD4-223ENST00000555904 IARSP41252 1262 aaKnown RBP15.31■□□□□ 0.04
ABCD4-223ENST00000555904 GYG1P46976 350 aa15.31■□□□□ 0.04
ABCD4-223ENST00000555904 RASSF7Q02833 373 aa15.31■□□□□ 0.04
ABCD4-223ENST00000555904 NIM1KQ8IY84 436 aa15.31■□□□□ 0.04
ABCD4-223ENST00000555904 DBNDD2Q9BQY9 259 aa15.31■□□□□ 0.04
ABCD4-223ENST00000555904 COA1Q9GZY4 146 aa15.31■□□□□ 0.04
ABCD4-223ENST00000555904 TLR7Q9NYK1 1049 aaKnown RBP15.31■□□□□ 0.04
ABCD4-223ENST00000555904 ARAP2Q8WZ64 1704 aa15.31■□□□□ 0.04
ABCD4-223ENST00000555904 ERC2O15083 957 aa15.3■□□□□ 0.04
ABCD4-223ENST00000555904 UQCRFS1P1P0C7P4 283 aa15.3■□□□□ 0.04
ABCD4-223ENST00000555904 LMNB1P20700 586 aa15.3■□□□□ 0.04
ABCD4-223ENST00000555904 CCDC102BQ68D86 513 aa15.3■□□□□ 0.04
ABCD4-223ENST00000555904 ECHDC1Q9NTX5 307 aa15.3■□□□□ 0.04
ABCD4-223ENST00000555904 TTC41PQ6P2S7 1318 aa15.29■□□□□ 0.04
ABCD4-223ENST00000555904 BCAMP50895 628 aa15.29■□□□□ 0.04
ABCD4-223ENST00000555904 FAM84BQ96KN1 310 aaPredicted RBP15.29■□□□□ 0.04
ABCD4-223ENST00000555904 FER1L6Q2WGJ9 1857 aa15.29■□□□□ 0.04
ABCD4-223ENST00000555904 IRS2Q9Y4H2 1338 aa15.28■□□□□ 0.04
ABCD4-223ENST00000555904 SEMA3EO15041 775 aa15.28■□□□□ 0.04
ABCD4-223ENST00000555904 ECE2O60344 883 aa15.28■□□□□ 0.04
ABCD4-223ENST00000555904 PHKA1P46020 1223 aa15.28■□□□□ 0.04
ABCD4-223ENST00000555904 DOK7Q18PE1 504 aa15.28■□□□□ 0.04
ABCD4-223ENST00000555904 PODNQ7Z5L7 613 aa15.28■□□□□ 0.04
ABCD4-223ENST00000555904 FBXO33Q7Z6M2 555 aa15.28■□□□□ 0.04
ABCD4-223ENST00000555904 TXNRD3Q86VQ6 643 aa15.28■□□□□ 0.04
ABCD4-223ENST00000555904 C16orf71Q8IYS4 520 aaPredicted RBP15.28■□□□□ 0.04
ABCD4-223ENST00000555904 AOX1Q06278 1338 aa15.27■□□□□ 0.04
ABCD4-223ENST00000555904 OTUD7AQ8TE49 926 aaPredicted RBP15.27■□□□□ 0.04
ABCD4-223ENST00000555904 ZNF512BQ96KM6 892 aaPredicted RBP15.27■□□□□ 0.04
ABCD4-223ENST00000555904 DBNDD1Q9H9R9 158 aa15.27■□□□□ 0.04
ABCD4-223ENST00000555904 CD209Q9NNX6 404 aa15.27■□□□□ 0.04
ABCD4-223ENST00000555904 DENND2AQ9ULE3 1009 aa15.27■□□□□ 0.04
ABCD4-223ENST00000555904 GOLGB1Q14789 3259 aaKnown RBP15.27■□□□□ 0.03
ABCD4-223ENST00000555904 GLRX3O76003 335 aaKnown RBP15.26■□□□□ 0.03
ABCD4-223ENST00000555904 IL1R1P14778 569 aa15.26■□□□□ 0.03
ABCD4-223ENST00000555904 ATP5JP18859 108 aa15.26■□□□□ 0.03
ABCD4-223ENST00000555904 ARID4AP29374 1257 aaPredicted RBP15.26■□□□□ 0.03
ABCD4-223ENST00000555904 PDE1AP54750 535 aa15.26■□□□□ 0.03
ABCD4-223ENST00000555904 FBXW7Q969H0 707 aa15.26■□□□□ 0.03
ABCD4-223ENST00000555904 RNF181Q9P0P0 153 aa15.26■□□□□ 0.03
ABCD4-223ENST00000555904 STAP2Q9UGK3 403 aa15.26■□□□□ 0.03
ABCD4-223ENST00000555904 ZNRF3Q9ULT6 936 aa15.26■□□□□ 0.03
ABCD4-223ENST00000555904 IQSEC3Q9UPP2 1182 aaPredicted RBP15.26■□□□□ 0.03
ABCD4-223ENST00000555904 RGS3P49796 1198 aa15.25■□□□□ 0.03
ABCD4-223ENST00000555904 RASGRF1Q13972 1273 aa15.25■□□□□ 0.03
ABCD4-223ENST00000555904 TSHZ3Q63HK5 1081 aa15.25■□□□□ 0.03
ABCD4-223ENST00000555904 PLEKHM2Q8IWE5 1019 aa15.25■□□□□ 0.03
ABCD4-223ENST00000555904 SPATA5Q8NB90 893 aa15.25■□□□□ 0.03
ABCD4-223ENST00000555904 TDRD7Q8NHU6 1098 aaKnown RBP15.25■□□□□ 0.03
ABCD4-223ENST00000555904 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.25■□□□□ 0.03
ABCD4-223ENST00000555904 SALL3Q9BXA9 1300 aa15.24■□□□□ 0.03
ABCD4-223ENST00000555904 PDE4AP27815 886 aa15.24■□□□□ 0.03
ABCD4-223ENST00000555904 EIF6P56537 245 aaKnown RBP15.24■□□□□ 0.03
ABCD4-223ENST00000555904 CHAF1AQ13111 956 aaPredicted RBP15.24■□□□□ 0.03
ABCD4-223ENST00000555904 ZGPATQ8N5A5 531 aaKnown RBP15.24■□□□□ 0.03
ABCD4-223ENST00000555904 DNAJC2Q99543 621 aaKnown RBP15.24■□□□□ 0.03
ABCD4-223ENST00000555904 OSBPL3Q9H4L5 887 aa15.24■□□□□ 0.03
ABCD4-223ENST00000555904 PDS5AQ29RF7 1337 aaKnown RBP15.23■□□□□ 0.03
ABCD4-223ENST00000555904 USP17L3A6NCW0 530 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms