RNA–Protein interactions for RNA: ENST00000555718.5

PPP4R3A-210, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 5

Gene PPP4R3A, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-210	ENST00000555718	BRPF3	Q9ULD4	1205 aa		10.19	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	POLR3D	P05423	398 aa	Predicted RBP	10.18	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	CDC25B	P30305	580 aa		10.18	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	MBTPS1	Q14703	1052 aa		10.18	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	SETDB1	Q15047	1291 aa		10.18	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	DTWD1	Q8N5C7	304 aa		10.18	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.18	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	SMNDC1	O75940	238 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	FURIN	P09958	794 aa		10.17	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	GATA4	P43694	442 aa		10.17	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	EHHADH	Q08426	723 aa		10.17	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	DOC2B	Q14184	412 aa		10.17	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	LENG1	Q96BZ8	264 aa	Predicted RBP	10.17	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	LINC01387	J3KSC0	135 aa		10.16	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	DLL1	O00548	723 aa		10.16	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	IGHA2	P01877	340 aa		10.16	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	EPHA1	P21709	976 aa		10.16	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	ADGRE1	Q14246	886 aa		10.16	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.16	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	USPL1	Q5W0Q7	1092 aa		10.16	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	ZKSCAN3	Q9BRR0	538 aa		10.16	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	ZFYVE28	Q9HCC9	887 aa		10.16	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	TM4SF5	O14894	197 aa		10.15	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	GALNT11	Q8NCW6	608 aa		10.15	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	NACC1	Q96RE7	527 aa		10.15	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	FAM129B	Q96TA1	746 aa		10.15	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	PPME1	Q9Y570	386 aa		10.15	□□□□□ -0.78
PPP4R3A-210	ENST00000555718	GPR182	O15218	404 aa		10.14	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	NDUFB5	O43674	189 aa		10.14	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	CDC27	P30260	824 aa		10.14	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	ORC1	Q13415	861 aa		10.14	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	OSMR	Q99650	979 aa		10.14	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	CARD10	Q9BWT7	1032 aa		10.14	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	TPSG1	Q9NRR2	321 aa		10.14	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	USP21	Q9UK80	565 aa		10.14	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	CCDC9	Q9Y3X0	531 aa	Known RBP	10.14	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	C9orf172	C9J069	976 aa		10.13	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	CCDC27	Q2M243	656 aa		10.13	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	PMEPA1	Q969W9	287 aa		10.13	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	PODXL2	Q9NZ53	605 aa		10.13	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	AMOTL2	Q9Y2J4	779 aa		10.13	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	PDE2A	O00408	941 aa	Predicted RBP	10.12	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	PTPRA	P18433	802 aa		10.12	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	SUZ12	Q15022	739 aa	Known RBP	10.12	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	ADAM19	Q9H013	955 aa		10.12	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	KCNK4	Q9NYG8	393 aa		10.12	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	NXPE3	Q969Y0	559 aa		10.11	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	METTL12	A8MUP2	240 aa		10.1	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	EDN3	P14138	238 aa		10.1	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.1	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	HGSNAT	Q68CP4	663 aa		10.1	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	IGF2-AS	Q6U949	168 aa		10.1	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.1	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	TXNRD3	Q86VQ6	643 aa		10.1	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	TMEM102	Q8N9M5	508 aa	Predicted RBP	10.1	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	ADAM23	O75077	832 aa		10.09	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	ALX3	O95076	343 aa		10.09	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	WISP1	O95388	367 aa		10.09	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	ITGB7	P26010	798 aa		10.09	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	NOS3	P29474	1203 aa		10.09	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	IREB2	P48200	963 aa	Known RBP	10.09	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	CACTIN-AS1	Q8N1I8	211 aa		10.09	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	NIF3L1	Q9GZT8	377 aa		10.09	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	SOX13	Q9UN79	622 aa		10.09	□□□□□ -0.79
PPP4R3A-210	ENST00000555718	FSCN2	O14926	492 aa		10.08	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	DDX3Y	O15523	660 aa	Known RBP	10.08	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	NRG1	Q02297	640 aa	Predicted RBP	10.08	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	WFDC12	Q8WWY7	111 aa		10.08	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	MUC3B	Q9H195	1237 aa		10.08	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	DCTN4	Q9UJW0	460 aa		10.08	□□□□□ -0.8
PPP4R3A-210	ENST00000555718		A0A1W2PP55	124 aa		10.07	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	ADAM11	O75078	769 aa		10.07	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	RSPO4	Q2I0M5	234 aa	Predicted RBP	10.07	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	TMC7	Q7Z402	723 aa		10.07	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	VN1R5	Q7Z5H4	357 aa		10.07	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	GALNT12	Q8IXK2	581 aa		10.07	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	AGGF1	Q8N302	714 aa	eCLIP	10.07	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	TMC1	Q8TDI8	760 aa		10.07	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	CITED4	Q96RK1	184 aa		10.07	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.07	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	RBCK1	Q9BYM8	510 aa		10.07	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	SRA1	Q9HD15	236 aa	Known RBP	10.07	□□□□□ -0.8
PPP4R3A-210	ENST00000555718		H3BRJ5	948 aa		10.06	□□□□□ -0.8
PPP4R3A-210	ENST00000555718		K7ELQ4	463 aa	Predicted RBP	10.06	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	MAPK1	P28482	360 aa		10.06	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	PDE3B	Q13370	1112 aa		10.06	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	NKAPL	Q5M9Q1	402 aa		10.06	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	MAP4K3	Q8IVH8	894 aa		10.06	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.06	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.06	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	KLHDC7B	Q96G42	594 aa		10.06	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	MEGF10	Q96KG7	1140 aa		10.06	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.06	□□□□□ -0.8
PPP4R3A-210	ENST00000555718		F8W735	103 aa	Predicted RBP	10.05	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	EIF1AY	O14602	144 aa	Known RBP	10.05	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	CD68	P34810	354 aa	Predicted RBP	10.05	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	ASAP3	Q8TDY4	903 aa		10.05	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	ERCC3	P19447	782 aa		10.04	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	MFAP1	P55081	439 aa	Known RBP	10.04	□□□□□ -0.8
PPP4R3A-210	ENST00000555718	UBASH3B	Q8TF42	649 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms