RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 HMGB1P09429 215 aaKnown RBP4.14□□□□□ -1.75
SEC23A-207ENST00000554615 FDPSP14324 419 aaKnown RBP4.14□□□□□ -1.75
SEC23A-207ENST00000554615 TRHP20396 242 aaPredicted RBP4.14□□□□□ -1.75
SEC23A-207ENST00000554615 KRT32Q14532 448 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 PTPAQ15257 358 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 LARP1Q6PKG0 1096 aaKnown RBP4.14□□□□□ -1.75
SEC23A-207ENST00000554615 MTERF4Q7Z6M4 381 aaKnown RBP4.14□□□□□ -1.75
SEC23A-207ENST00000554615 NBPF11Q86T75 865 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 MAP7D2Q96T17 732 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 ZSCAN16Q9H4T2 348 aaPredicted RBP4.14□□□□□ -1.75
SEC23A-207ENST00000554615 DBNLQ9UJU6 430 aaKnown RBP4.14□□□□□ -1.75
SEC23A-207ENST00000554615 FUT2Q10981 343 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 NCAPHQ15003 741 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 ADCK5Q3MIX3 580 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 FCHSD1Q86WN1 690 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 DHX40Q8IX18 779 aaKnown RBP4.14□□□□□ -1.75
SEC23A-207ENST00000554615 KBTBD3Q8NAB2 608 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 ZNF579Q8NAF0 562 aaKnown RBP4.14□□□□□ -1.75
SEC23A-207ENST00000554615 NSUN7Q8NE18 718 aaKnown RBP4.14□□□□□ -1.75
SEC23A-207ENST00000554615 PGBD1Q96JS3 809 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 CCDC39Q9UFE4 941 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 PTPRFP10586 1907 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 SMARCA5O60264 1052 aaPredicted RBP4.14□□□□□ -1.75
SEC23A-207ENST00000554615 DHX8Q14562 1220 aaKnown RBP4.14□□□□□ -1.75
SEC23A-207ENST00000554615 CSPP1Q1MSJ5 1256 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 SLC10A5Q5PT55 438 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 BARGINQ6ZT62 677 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 USP48Q86UV5 1035 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 CREBRFQ8IUR6 639 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 TEX2Q8IWB9 1127 aa4.14□□□□□ -1.75
SEC23A-207ENST00000554615 FMR1NBQ8N0W7 255 aaPredicted RBP4.14□□□□□ -1.75
SEC23A-207ENST00000554615 BICC1Q9H694 974 aaKnown RBP4.14□□□□□ -1.75
SEC23A-207ENST00000554615 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.14□□□□□ -1.75
SEC23A-207ENST00000554615 STX6O43752 255 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 PPP6R2O75170 966 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 UBTFL1P0CB47 393 aaPredicted RBP4.13□□□□□ -1.75
SEC23A-207ENST00000554615 AXDND1Q5T1B0 1012 aaPredicted RBP4.13□□□□□ -1.75
SEC23A-207ENST00000554615 CASC1Q6TDU7 716 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 BRINP3Q76B58 766 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 ZC3H3Q8IXZ2 948 aaKnown RBP4.13□□□□□ -1.75
SEC23A-207ENST00000554615 KCNN1Q92952 543 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 FAM217BQ9NTX9 383 aaPredicted RBP4.13□□□□□ -1.75
SEC23A-207ENST00000554615 IMPACTQ9P2X3 320 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 TACC3Q9Y6A5 838 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 A0A0D9SFI3 127 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 IKBKBO14920 756 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 SNRPA1P09661 255 aaKnown RBP4.13□□□□□ -1.75
SEC23A-207ENST00000554615 ANTXR2P58335 489 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 PSME1Q06323 249 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 PDCL3Q9H2J4 239 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 ANK1P16157 1881 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 OTOFQ9HC10 1997 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 SLC26A4O43511 780 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.13□□□□□ -1.75
SEC23A-207ENST00000554615 IFNL2Q8IZJ0 200 aa4.13□□□□□ -1.75
SEC23A-207ENST00000554615 MKRN1Q9UHC7 482 aaKnown RBP4.13□□□□□ -1.75
SEC23A-207ENST00000554615 BTBD11A6QL63 1104 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 F6X3S4 739 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 GADD45BO75293 160 aaPredicted RBP4.12□□□□□ -1.75
SEC23A-207ENST00000554615 YEATS4O95619 227 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 PCP11498 1178 aaKnown RBP4.12□□□□□ -1.75
SEC23A-207ENST00000554615 ZNF18P17022 549 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 CCZ1BP86790 482 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 CCZ1P86791 482 aaPredicted RBP4.12□□□□□ -1.75
SEC23A-207ENST00000554615 HDGFL1Q5TGJ6 251 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 POLR3GLQ9BT43 218 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 MAP3K2Q9Y2U5 619 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 SALL2Q9Y467 1007 aaPredicted RBP4.12□□□□□ -1.75
SEC23A-207ENST00000554615 CNTNAP4Q9C0A0 1308 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 KLRG2A4D1S0 409 aaPredicted RBP4.12□□□□□ -1.75
SEC23A-207ENST00000554615 CTAGE5O15320 804 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 PHF14O94880 888 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 UBE3CQ15386 1083 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 GIMAP6Q6P9H5 292 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 SASS6Q6UVJ0 657 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 TTC6Q86TZ1 520 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 RUFY2Q8WXA3 655 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 SHISA4Q96DD7 197 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 DDX19AQ9NUU7 478 aaKnown RBP4.12□□□□□ -1.75
SEC23A-207ENST00000554615 PI4KAP2A4QPH2 592 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 ZFYP08048 801 aaPredicted RBP4.12□□□□□ -1.75
SEC23A-207ENST00000554615 NMIQ13287 307 aaPredicted RBP4.12□□□□□ -1.75
SEC23A-207ENST00000554615 NPY5RQ15761 445 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 KRT28Q7Z3Y7 464 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 ZNF589Q86UQ0 364 aaPredicted RBP4.12□□□□□ -1.75
SEC23A-207ENST00000554615 SMAP1Q8IYB5 467 aaPredicted RBP4.12□□□□□ -1.75
SEC23A-207ENST00000554615 PI4KAP1Q8N8J0 262 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 CHMP4CQ96CF2 233 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 STK31Q9BXU1 1019 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 ZNF219Q9P2Y4 722 aaPredicted RBP4.12□□□□□ -1.75
SEC23A-207ENST00000554615 TAF6LQ9Y6J9 622 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 MAST3O60307 1309 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 ITIH6Q6UXX5 1313 aa4.12□□□□□ -1.75
SEC23A-207ENST00000554615 PATJQ8NI35 1801 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 SCN9AQ15858 1988 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 TULP1O00294 542 aaPredicted RBP4.11□□□□□ -1.75
SEC23A-207ENST00000554615 NEMFO60524 1076 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 CHGAP10645 457 aaKnown RBP4.11□□□□□ -1.75
SEC23A-207ENST00000554615 MCCP23508 829 aa4.11□□□□□ -1.75
SEC23A-207ENST00000554615 IL15P40933 162 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms