RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ANKRD24Q8TF21 1146 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 ZRANB2O95218 330 aaKnown RBP eCLIP3.76□□□□□ -1.81
SYNE2-212ENST00000554584 LETM2Q2VYF4 491 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 CCDC122Q5T0U0 273 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 UBE3BQ7Z3V4 1068 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 ODF2LQ9ULJ1 636 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 USO1O60763 962 aaKnown RBP3.76□□□□□ -1.81
SYNE2-212ENST00000554584 N4BP1O75113 896 aaKnown RBP3.76□□□□□ -1.81
SYNE2-212ENST00000554584 CCDC6Q16204 474 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 GIGYF1O75420 1035 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-212ENST00000554584 KARSQ15046 597 aaKnown RBP3.76□□□□□ -1.81
SYNE2-212ENST00000554584 LRRCC1Q9C099 1032 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 FAM184BQ9ULE4 1060 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 SETD5Q9C0A6 1442 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 PRR29P0C7W0 189 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.76□□□□□ -1.81
SYNE2-212ENST00000554584 PDCD7Q8N8D1 485 aaKnown RBP3.76□□□□□ -1.81
SYNE2-212ENST00000554584 DNAI2Q9GZS0 605 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 AXIN1O15169 862 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 SLU7O95391 586 aaKnown RBP3.76□□□□□ -1.81
SYNE2-212ENST00000554584 CFAP100Q494V2 611 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 RSPH3Q86UC2 560 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 ZNF396Q96N95 335 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-212ENST00000554584 ALS2CR12Q96Q35 445 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 EEA1Q15075 1411 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 KMT5BQ4FZB7 885 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 EPSTI1Q96J88 318 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 HELLSQ9NRZ9 838 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 PDRG1Q9NUG6 133 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 GOLGA6L7A0A1B0GV03 622 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 TMC6Q7Z403 805 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 ARHGAP35Q9NRY4 1499 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 STK10O94804 968 aaKnown RBP3.76□□□□□ -1.81
SYNE2-212ENST00000554584 UHMK1Q8TAS1 419 aaKnown RBP3.76□□□□□ -1.81
SYNE2-212ENST00000554584 CERKQ8TCT0 537 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 CARMIL2Q6F5E8 1435 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 BRD2P25440 801 aaKnown RBP3.76□□□□□ -1.81
SYNE2-212ENST00000554584 IL31Q6EBC2 164 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 ANKLE2Q86XL3 938 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 OLA1Q9NTK5 396 aaKnown RBP3.76□□□□□ -1.81
SYNE2-212ENST00000554584 CETN2P41208 172 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 MCUQ8NE86 351 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 C22orf23Q9BZE7 217 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 DNAJC25Q9H1X3 360 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 SPAG17Q6Q759 2223 aa3.76□□□□□ -1.81
SYNE2-212ENST00000554584 GKAP1Q5VSY0 366 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 LARP1BQ659C4 914 aaKnown RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 TBC1D9Q6ZT07 1266 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 GSTA5Q7RTV2 222 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 CNTROBQ8N137 903 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 CCT6BQ92526 530 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 ZBED2Q9BTP6 218 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 PPANQ9NQ55 473 aaKnown RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 GPHNQ9NQX3 736 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 GTF2F1P35269 517 aaKnown RBP eCLIP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 MYSM1Q5VVJ2 828 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 FOXR1Q6PIV2 292 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 CMTR1Q8N1G2 835 aaKnown RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 PGBD3Q8N328 593 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 SPDYE1Q8NFV5 336 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 TTF1Q15361 905 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 PRAMEF18Q5VWM3 479 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 MAPKAPK5Q8IW41 473 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 FSD2A1L4K1 749 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 HSPA1LP34931 641 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 RNF168Q8IYW5 571 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 TNMDQ9H2S6 317 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 INF2Q27J81 1249 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 KIF4BQ2VIQ3 1234 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 CFAP157Q5JU67 520 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 VMP1Q96GC9 406 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 CABP5Q9NP86 173 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 AMOTL2Q9Y2J4 779 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 TBCAO75347 108 aaKnown RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 TSC1Q92574 1164 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 IQCGQ9H095 443 aaKnown RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 PARP2Q9UGN5 583 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 VGLL3A8MV65 326 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 LEMD2Q8NC56 503 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 PGBD1Q96JS3 809 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 NACAP1Q9BZK3 213 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 ARHGAP29Q52LW3 1261 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 ESYT2A0FGR8 921 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 IFIT1P09914 478 aaKnown RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 RRP1P56182 461 aaKnown RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 RAD18Q9NS91 495 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 NINLQ9Y2I6 1382 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 ICE1Q9Y2F5 2266 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 PTPDC1A2A3K4 754 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 XAGE3Q8WTP9 111 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 ALG1Q9BT22 464 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 NEUROD4Q9HD90 331 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 NAA16Q6N069 864 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-212ENST00000554584 NBPF8Q3BBV2 869 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 MAP7D1Q3KQU3 841 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 NBPF14Q5TI25 921 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 CEP57Q86XR8 500 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 APOL5Q9BWW9 433 aa3.75□□□□□ -1.81
SYNE2-212ENST00000554584 ATG2BQ96BY7 2078 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms