RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 HIRIP3Q9BW71 556 aaPredicted RBP8.8□□□□□ -1
SCFD1-212ENST00000554486 AMOTL2Q9Y2J4 779 aa8.8□□□□□ -1
SCFD1-212ENST00000554486 NWD1Q149M9 1564 aa8.8□□□□□ -1
SCFD1-212ENST00000554486 QRICH2Q9H0J4 1663 aa8.79□□□□□ -1
SCFD1-212ENST00000554486 ROBO2Q9HCK4 1378 aa8.79□□□□□ -1
SCFD1-212ENST00000554486 SERTM1A2A2V5 107 aa8.79□□□□□ -1
SCFD1-212ENST00000554486 KCNA6P17658 529 aa8.79□□□□□ -1
SCFD1-212ENST00000554486 LORP23490 312 aaPredicted RBP8.79□□□□□ -1
SCFD1-212ENST00000554486 PLA2G4AP47712 749 aa8.79□□□□□ -1
SCFD1-212ENST00000554486 KRT76Q01546 638 aa8.79□□□□□ -1
SCFD1-212ENST00000554486 GTPBP3Q969Y2 492 aaKnown RBP8.79□□□□□ -1
SCFD1-212ENST00000554486 TESK2Q96S53 571 aa8.79□□□□□ -1
SCFD1-212ENST00000554486 GPAMQ9HCL2 828 aa8.79□□□□□ -1
SCFD1-212ENST00000554486 PTCH1Q13635 1447 aa8.79□□□□□ -1
SCFD1-212ENST00000554486 FAM135BQ49AJ0 1406 aa8.79□□□□□ -1
SCFD1-212ENST00000554486 EIF3AQ14152 1382 aaKnown RBP8.78□□□□□ -1
SCFD1-212ENST00000554486 PLEKHH1Q9ULM0 1364 aa8.78□□□□□ -1
SCFD1-212ENST00000554486 EFHC2Q5JST6 749 aa8.78□□□□□ -1
SCFD1-212ENST00000554486 RNFT1Q5M7Z0 435 aa8.78□□□□□ -1
SCFD1-212ENST00000554486 WAPLQ7Z5K2 1190 aa8.78□□□□□ -1
SCFD1-212ENST00000554486 AEBP1Q8IUX7 1158 aa8.78□□□□□ -1
SCFD1-212ENST00000554486 COL26A1Q96A83 441 aa8.78□□□□□ -1
SCFD1-212ENST00000554486 AIDAQ96BJ3 306 aa8.78□□□□□ -1
SCFD1-212ENST00000554486 PRAM1Q96QH2 718 aa8.78□□□□□ -1
SCFD1-212ENST00000554486 SAP130Q9H0E3 1048 aa8.78□□□□□ -1
SCFD1-212ENST00000554486 QTRT2Q9H974 415 aaKnown RBP8.78□□□□□ -1
SCFD1-212ENST00000554486 PHF24Q9UPV7 400 aa8.78□□□□□ -1
SCFD1-212ENST00000554486 HCN4Q9Y3Q4 1203 aa8.78□□□□□ -1
SCFD1-212ENST00000554486 CENPJQ9HC77 1338 aaPredicted RBP8.78□□□□□ -1
SCFD1-212ENST00000554486 ATP4AP20648 1035 aa8.77□□□□□ -1.01
SCFD1-212ENST00000554486 MSX1P28360 303 aa8.77□□□□□ -1.01
SCFD1-212ENST00000554486 SRSF11Q05519 484 aaKnown RBP8.77□□□□□ -1.01
SCFD1-212ENST00000554486 NSFL1CQ9UNZ2 370 aaKnown RBP8.77□□□□□ -1.01
SCFD1-212ENST00000554486 GNEQ9Y223 722 aaKnown RBP8.77□□□□□ -1.01
SCFD1-212ENST00000554486 ZNF335Q9H4Z2 1342 aaPredicted RBP8.77□□□□□ -1.01
SCFD1-212ENST00000554486 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.77□□□□□ -1.01
SCFD1-212ENST00000554486 SBNO2Q9Y2G9 1366 aa8.76□□□□□ -1.01
SCFD1-212ENST00000554486 GPR25O00155 361 aa8.76□□□□□ -1.01
SCFD1-212ENST00000554486 SLURP2P0DP57 97 aa8.76□□□□□ -1.01
SCFD1-212ENST00000554486 KCNA1Q09470 495 aa8.76□□□□□ -1.01
SCFD1-212ENST00000554486 SAFB2Q14151 953 aaKnown RBP eCLIP8.76□□□□□ -1.01
SCFD1-212ENST00000554486 NAA30Q147X3 362 aaPredicted RBP8.76□□□□□ -1.01
SCFD1-212ENST00000554486 B4GALNT3Q6L9W6 998 aa8.76□□□□□ -1.01
SCFD1-212ENST00000554486 CFHR5Q9BXR6 569 aa8.76□□□□□ -1.01
SCFD1-212ENST00000554486 MBIPQ9NS73 344 aa8.76□□□□□ -1.01
SCFD1-212ENST00000554486 POGKQ9P215 609 aa8.76□□□□□ -1.01
SCFD1-212ENST00000554486 LRFN2Q9ULH4 789 aa8.76□□□□□ -1.01
SCFD1-212ENST00000554486 ZNF232Q9UNY5 417 aa8.76□□□□□ -1.01
SCFD1-212ENST00000554486 NKTRP30414 1462 aaKnown RBP8.76□□□□□ -1.01
SCFD1-212ENST00000554486 ARID4AP29374 1257 aaPredicted RBP8.75□□□□□ -1.01
SCFD1-212ENST00000554486 SERPINB4P48594 390 aa8.75□□□□□ -1.01
SCFD1-212ENST00000554486 FAM26DQ5JW98 314 aa8.75□□□□□ -1.01
SCFD1-212ENST00000554486 COX20Q5RI15 118 aa8.75□□□□□ -1.01
SCFD1-212ENST00000554486 ALDH16A1Q8IZ83 802 aa8.75□□□□□ -1.01
SCFD1-212ENST00000554486 KCTD17Q8N5Z5 321 aa8.75□□□□□ -1.01
SCFD1-212ENST00000554486 PHACTR1Q9C0D0 580 aa8.75□□□□□ -1.01
SCFD1-212ENST00000554486 RUBCNLQ9H714 662 aa8.75□□□□□ -1.01
SCFD1-212ENST00000554486 XIRP1Q702N8 1843 aaKnown RBP8.75□□□□□ -1.01
SCFD1-212ENST00000554486 PTCD1O75127 700 aaKnown RBP8.74□□□□□ -1.01
SCFD1-212ENST00000554486 ADAMTS2O95450 1211 aa8.74□□□□□ -1.01
SCFD1-212ENST00000554486 THBS1P07996 1170 aa8.74□□□□□ -1.01
SCFD1-212ENST00000554486 TATP17735 454 aaPredicted RBP8.74□□□□□ -1.01
SCFD1-212ENST00000554486 CRISPLD1Q9H336 500 aa8.74□□□□□ -1.01
SCFD1-212ENST00000554486 DNMT3AQ9Y6K1 912 aaPredicted RBP8.74□□□□□ -1.01
SCFD1-212ENST00000554486 IVNS1ABPQ9Y6Y0 642 aa8.74□□□□□ -1.01
SCFD1-212ENST00000554486 TULP4Q9NRJ4 1543 aa8.74□□□□□ -1.01
SCFD1-212ENST00000554486 NALCNQ8IZF0 1738 aa8.74□□□□□ -1.01
SCFD1-212ENST00000554486 DISP3Q9P2K9 1392 aa8.73□□□□□ -1.01
SCFD1-212ENST00000554486 ADGRB2O60241 1585 aa8.73□□□□□ -1.01
SCFD1-212ENST00000554486 TNFRSF10BO14763 440 aa8.73□□□□□ -1.01
SCFD1-212ENST00000554486 MX2P20592 715 aa8.73□□□□□ -1.01
SCFD1-212ENST00000554486 GAS6Q14393 721 aa8.73□□□□□ -1.01
SCFD1-212ENST00000554486 ECM1Q16610 540 aa8.73□□□□□ -1.01
SCFD1-212ENST00000554486 C1orf53Q5VUE5 145 aa8.73□□□□□ -1.01
SCFD1-212ENST00000554486 FIGNL1Q6PIW4 674 aa8.73□□□□□ -1.01
SCFD1-212ENST00000554486 SVOPQ8N4V2 548 aa8.73□□□□□ -1.01
SCFD1-212ENST00000554486 GTF3C2Q8WUA4 911 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-212ENST00000554486 MYO19Q96H55 970 aa8.73□□□□□ -1.01
SCFD1-212ENST00000554486 NGLY1Q96IV0 654 aa8.73□□□□□ -1.01
SCFD1-212ENST00000554486 ZDHHC3Q9NYG2 299 aa8.73□□□□□ -1.01
SCFD1-212ENST00000554486 CHMP3Q9Y3E7 222 aa8.73□□□□□ -1.01
SCFD1-212ENST00000554486 LRRC7Q96NW7 1537 aa8.73□□□□□ -1.01
SCFD1-212ENST00000554486 LTBP4Q8N2S1 1624 aa8.72□□□□□ -1.01
SCFD1-212ENST00000554486 MTMR3Q13615 1198 aa8.72□□□□□ -1.01
SCFD1-212ENST00000554486 ARSJQ5FYB0 599 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-212ENST00000554486 BCS1LQ9Y276 419 aa8.72□□□□□ -1.01
SCFD1-212ENST00000554486 KIF7Q2M1P5 1343 aa8.72□□□□□ -1.01
SCFD1-212ENST00000554486 WASHC2AQ641Q2 1341 aa8.72□□□□□ -1.01
SCFD1-212ENST00000554486 TMEM94Q12767 1356 aa8.72□□□□□ -1.01
SCFD1-212ENST00000554486 CCDC7Q96M83 1385 aa8.72□□□□□ -1.01
SCFD1-212ENST00000554486 ADGRL3Q9HAR2 1447 aa8.71□□□□□ -1.01
SCFD1-212ENST00000554486 TMF1P82094 1093 aa8.71□□□□□ -1.02
SCFD1-212ENST00000554486 MAP3K10Q02779 954 aa8.71□□□□□ -1.02
SCFD1-212ENST00000554486 NLRP8Q86W28 1048 aa8.71□□□□□ -1.02
SCFD1-212ENST00000554486 ZIC5Q96T25 663 aa8.71□□□□□ -1.02
SCFD1-212ENST00000554486 ENAMQ9NRM1 1142 aa8.71□□□□□ -1.02
SCFD1-212ENST00000554486 EVC2Q86UK5 1308 aa8.71□□□□□ -1.02
SCFD1-212ENST00000554486 NCOA3Q9Y6Q9 1424 aa8.71□□□□□ -1.02
SCFD1-212ENST00000554486 MAP2K3P46734 347 aa8.7□□□□□ -1.02
SCFD1-212ENST00000554486 RTN1Q16799 776 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms