RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 INTS4Q96HW7 963 aaKnown RBP10.45□□□□□ -0.74
CCNK-203ENST00000553865 RBM27Q9P2N5 1060 aaKnown RBP10.45□□□□□ -0.74
CCNK-203ENST00000553865 RBM8AQ9Y5S9 174 aaKnown RBP10.45□□□□□ -0.74
CCNK-203ENST00000553865 PPLO60437 1756 aa10.45□□□□□ -0.74
CCNK-203ENST00000553865 TMEM266Q2M3C6 531 aa10.45□□□□□ -0.74
CCNK-203ENST00000553865 BICDL1Q6ZP65 573 aa10.45□□□□□ -0.74
CCNK-203ENST00000553865 CNNM3Q8NE01 707 aa10.45□□□□□ -0.74
CCNK-203ENST00000553865 PYM1Q9BRP8 204 aaKnown RBP10.45□□□□□ -0.74
CCNK-203ENST00000553865 PPP1R1BQ9UD71 204 aaPredicted RBP10.45□□□□□ -0.74
CCNK-203ENST00000553865 LARP6Q9BRS8 491 aaKnown RBP10.45□□□□□ -0.74
CCNK-203ENST00000553865 EHMT1Q9H9B1 1298 aa10.45□□□□□ -0.74
CCNK-203ENST00000553865 IVLP07476 585 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 FERP16591 822 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 IARSP41252 1262 aaKnown RBP10.44□□□□□ -0.74
CCNK-203ENST00000553865 CATIPQ7Z7H3 387 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 DZIP1Q86YF9 867 aaKnown RBP10.44□□□□□ -0.74
CCNK-203ENST00000553865 C16orf71Q8IYS4 520 aaPredicted RBP10.44□□□□□ -0.74
CCNK-203ENST00000553865 CRACR2BQ8N4Y2 399 aaPredicted RBP10.44□□□□□ -0.74
CCNK-203ENST00000553865 XAGE3Q8WTP9 111 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 BBXQ8WY36 941 aaPredicted RBP10.44□□□□□ -0.74
CCNK-203ENST00000553865 ANXA1P04083 346 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 CCDC6Q16204 474 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 CCDC178Q5BJE1 867 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 TFIP11Q9UBB9 837 aaKnown RBP10.44□□□□□ -0.74
CCNK-203ENST00000553865 ORC3Q9UBD5 711 aaPredicted RBP10.44□□□□□ -0.74
CCNK-203ENST00000553865 RAD50Q92878 1312 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 MCMDC2Q4G0Z9 681 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 DDX46Q7L014 1031 aaKnown RBP10.44□□□□□ -0.74
CCNK-203ENST00000553865 ZMYND15Q9H091 742 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 USO1O60763 962 aaKnown RBP10.44□□□□□ -0.74
CCNK-203ENST00000553865 ZNF165P49910 485 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 PPP4R3BQ5MIZ7 849 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 PPP4R3AQ6IN85 833 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 KANK3Q6NY19 840 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 CDC5LQ99459 802 aaKnown RBP10.44□□□□□ -0.74
CCNK-203ENST00000553865 USP31Q70CQ4 1352 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 IL15P40933 162 aaPredicted RBP10.44□□□□□ -0.74
CCNK-203ENST00000553865 MATR3P43243 847 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCNK-203ENST00000553865 PIP4K2BP78356 416 aa10.44□□□□□ -0.74
CCNK-203ENST00000553865 RNMTO43148 476 aaKnown RBP10.43□□□□□ -0.74
CCNK-203ENST00000553865 F13A1P00488 732 aa10.43□□□□□ -0.74
CCNK-203ENST00000553865 METAP2P50579 478 aaKnown RBP eCLIP10.43□□□□□ -0.74
CCNK-203ENST00000553865 TMEM67Q5HYA8 995 aa10.43□□□□□ -0.74
CCNK-203ENST00000553865 NAP1L3Q99457 506 aaPredicted RBP10.43□□□□□ -0.74
CCNK-203ENST00000553865 USP26Q9BXU7 913 aa10.43□□□□□ -0.74
CCNK-203ENST00000553865 FSD2A1L4K1 749 aa10.43□□□□□ -0.74
CCNK-203ENST00000553865 COPS6Q7L5N1 327 aa10.43□□□□□ -0.74
CCNK-203ENST00000553865 CCDC12Q8WUD4 166 aaPredicted RBP10.43□□□□□ -0.74
CCNK-203ENST00000553865 USP32Q8NFA0 1604 aa10.43□□□□□ -0.74
CCNK-203ENST00000553865 RANBP6O60518 1105 aaKnown RBP10.43□□□□□ -0.74
CCNK-203ENST00000553865 XRCC6P12956 609 aaKnown RBP eCLIP10.43□□□□□ -0.74
CCNK-203ENST00000553865 ZNF444Q8N0Y2 327 aaPredicted RBP10.43□□□□□ -0.74
CCNK-203ENST00000553865 CEP112Q8N8E3 955 aa10.43□□□□□ -0.74
CCNK-203ENST00000553865 CUL5Q93034 780 aa10.43□□□□□ -0.74
CCNK-203ENST00000553865 HOMER2Q9NSB8 354 aa10.43□□□□□ -0.74
CCNK-203ENST00000553865 TMEM94Q12767 1356 aa10.43□□□□□ -0.74
CCNK-203ENST00000553865 CCDC160A6NGH7 325 aa10.43□□□□□ -0.74
CCNK-203ENST00000553865 CHL1O00533 1208 aa10.43□□□□□ -0.74
CCNK-203ENST00000553865 SETSIPP0DME0 302 aa10.43□□□□□ -0.74
CCNK-203ENST00000553865 USP48Q86UV5 1035 aa10.43□□□□□ -0.74
CCNK-203ENST00000553865 BRF1Q92994 677 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 TRIM35Q9UPQ4 493 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 CEP83Q9Y592 693 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 NCAPD2Q15021 1401 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 SLAIN2Q9P270 581 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 PTPRMP28827 1452 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 AOX1Q06278 1338 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 LDHCP07864 332 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 GPTP24298 496 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 CLCN1P35523 988 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 MFSD6Q6ZSS7 791 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 NGLY1Q96IV0 654 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 PRIMPOLQ96LW4 560 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 ERBB4Q15303 1308 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 TMEM131LA2VDJ0 1609 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 GOLGA6L9A6NEM1 432 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 CHMLP26374 656 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 CCDC150Q8NCX0 1101 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 CCDC194A0A1B0GVG4 234 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 DYNC1I1O14576 645 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 WDHD1O75717 1129 aaPredicted RBP10.42□□□□□ -0.74
CCNK-203ENST00000553865 SEC24BO95487 1268 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 KIF5BP33176 963 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 KCNG4Q8TDN1 519 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 PIBF1Q8WXW3 757 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 CNPY2Q9Y2B0 182 aa10.42□□□□□ -0.74
CCNK-203ENST00000553865 MROH1Q8NDA8 1641 aa10.41□□□□□ -0.74
CCNK-203ENST00000553865 HLTFQ14527 1009 aaKnown RBP eCLIP10.41□□□□□ -0.74
CCNK-203ENST00000553865 MYO3AQ8NEV4 1616 aa10.41□□□□□ -0.74
CCNK-203ENST00000553865 CEP170BQ9Y4F5 1589 aaPredicted RBP10.41□□□□□ -0.74
CCNK-203ENST00000553865 NOL3O60936 208 aaKnown RBP10.41□□□□□ -0.74
CCNK-203ENST00000553865 NLRP5P59047 1200 aa10.41□□□□□ -0.74
CCNK-203ENST00000553865 NMIQ13287 307 aaPredicted RBP10.41□□□□□ -0.74
CCNK-203ENST00000553865 NECAB1Q8N987 351 aa10.41□□□□□ -0.74
CCNK-203ENST00000553865 KRT23Q9C075 422 aa10.41□□□□□ -0.74
CCNK-203ENST00000553865 NSRP1Q9H0G5 558 aaKnown RBP10.41□□□□□ -0.74
CCNK-203ENST00000553865 HCLS1P14317 486 aaPredicted RBP10.41□□□□□ -0.74
CCNK-203ENST00000553865 HS1BP3Q53T59 392 aa10.41□□□□□ -0.74
CCNK-203ENST00000553865 CCDC102BQ68D86 513 aa10.41□□□□□ -0.74
CCNK-203ENST00000553865 CACNA2D4Q7Z3S7 1137 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms