RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 E7EVH7 732 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 CCDC148Q8NFR7 591 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 FAM200AQ8TCP9 573 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 PPP1R14BQ96C90 147 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 WRNQ14191 1432 aaPredicted RBP eCLIP10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 HSF2BPO75031 334 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 TAF11Q15544 211 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 CPLX4Q7Z7G2 160 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 TRIM50Q86XT4 487 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 PDLIM2Q96JY6 352 aa10.2□□□□□ -0.78
GTF2A1-203ENST00000553612 OLFML2BQ68BL8 750 aa10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 NDEL1Q9GZM8 345 aa10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 NSFL1CQ9UNZ2 370 aaKnown RBP10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 LUC7L2Q9Y383 392 aaKnown RBP10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 USP16Q9Y5T5 823 aa10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 KSR1Q8IVT5 923 aa10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 CAPS2Q9BXY5 557 aa10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 LRRC27Q9C0I9 530 aa10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 PALMDQ9NP74 551 aa10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 LZTFL1Q9NQ48 299 aa10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 PCDHB15Q9Y5E8 787 aa10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 PAPOLAP51003 745 aaKnown RBP10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 LONRF2Q1L5Z9 754 aa10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 CCDC110Q8TBZ0 833 aa10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 STAG1Q8WVM7 1258 aa10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 PPANQ9NQ55 473 aaKnown RBP10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 TDRD7Q8NHU6 1098 aaKnown RBP10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 ATP11AP98196 1134 aa10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 EZH1Q92800 747 aaPredicted RBP10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 OSBPL1AQ9BXW6 950 aa10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 RPS6KL1Q9Y6S9 549 aa10.19□□□□□ -0.78
GTF2A1-203ENST00000553612 RNF40O75150 1001 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 DDHD2O94830 711 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 CCDC40Q4G0X9 1142 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 HAUS1Q96CS2 278 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 RGL1Q9NZL6 768 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 PLEKHG2Q9H7P9 1386 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 CTAGE15A4D2H0 777 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 CTAGE8P0CG41 777 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 LACTBP83111 547 aaPredicted RBP10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 PTPN21Q16825 1174 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 KLHL10Q6JEL2 608 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 CTAGE6Q86UF2 777 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 CTAGE4Q8IX94 777 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 FAM81AQ8TBF8 368 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 CSPG5O95196 566 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 PLA2G4AP47712 749 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 TTC30AQ86WT1 665 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 LMBR1Q8WVP7 490 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 LUC7L3O95232 432 aaKnown RBP10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 USP5P45974 858 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 RASEFQ8IZ41 740 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 PAPOLBQ9NRJ5 636 aaKnown RBP10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 WWC3Q9ULE0 1092 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 CHMP2BQ9UQN3 213 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 PRELID1Q9Y255 219 aa10.18□□□□□ -0.78
GTF2A1-203ENST00000553612 CTIFO43310 598 aaKnown RBP10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 CLCN2P51788 898 aa10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 GSDMDP57764 484 aa10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 PARP9Q8IXQ6 854 aa10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 LIMCH1Q9UPQ0 1083 aa10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 ZKSCAN1P17029 563 aaPredicted RBP10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 UBE4AQ14139 1066 aa10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 GBP7Q8N8V2 638 aaPredicted RBP10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 ORC3Q9UBD5 711 aaPredicted RBP10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 LDHAP00338 332 aaKnown RBP10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 RBM6P78332 1123 aaKnown RBP10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 CUL4BQ13620 913 aa10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 NDUFB5O43674 189 aa10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 TOP1P11387 765 aaKnown RBP10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 ZBTB17Q13105 803 aa10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 MVPQ14764 893 aaKnown RBP10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 ATP11CQ8NB49 1132 aa10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 SREK1Q8WXA9 508 aaKnown RBP10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 NR1H4Q96RI1 486 aaPredicted RBP10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 UTP14AQ9BVJ6 771 aaKnown RBP10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 ZMYM3Q14202 1370 aa10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 PCP4L1A6NKN8 68 aa10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 CHMP4BP1P59074 171 aa10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 DNM1Q05193 864 aaKnown RBP10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 TYRO3Q06418 890 aa10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 HLTFQ14527 1009 aaKnown RBP eCLIP10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 SPZ1Q9BXG8 430 aa10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 RASAL2Q9UJF2 1139 aa10.17□□□□□ -0.78
GTF2A1-203ENST00000553612 FMNL1O95466 1100 aaPredicted RBP10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 FLIIQ13045 1269 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 MAP7Q14244 749 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 LCA5Q86VQ0 697 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 FAF1Q9UNN5 650 aaPredicted RBP10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 DYNC1I2Q13409 638 aaKnown RBP10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 STIM1Q13586 685 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 ATP6V0A1Q93050 837 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 FHAD1B1AJZ9 1412 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 EPB41L2O43491 1005 aaKnown RBP10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 S100BP04271 92 aaPredicted RBP10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 MUM1Q2TAK8 710 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 CCDC152Q4G0S7 254 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 CCDC158Q5M9N0 1113 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 AOPEPQ8N6M6 819 aa10.16□□□□□ -0.78
GTF2A1-203ENST00000553612 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms