RNA–Protein interactions for RNA: ENST00000551854.5

LMBR1L-223, Transcript of limb development membrane protein 1 like, human

TSL 4

Gene LMBR1L, Length 535 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1L-223	ENST00000551854	PCGF6	Q9BYE7	350 aa		13.12	□□□□□ -0.31
LMBR1L-223	ENST00000551854	ANGEL1	Q9UNK9	670 aa	Known RBP	13.12	□□□□□ -0.31
LMBR1L-223	ENST00000551854	MYO3B	Q8WXR4	1341 aa		13.12	□□□□□ -0.31
LMBR1L-223	ENST00000551854	MAPK8IP3	Q9UPT6	1336 aa		13.12	□□□□□ -0.31
LMBR1L-223	ENST00000551854	ATP5J2-PTCD1	G3V325	749 aa		13.11	□□□□□ -0.31
LMBR1L-223	ENST00000551854	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
LMBR1L-223	ENST00000551854	RTL5	Q5HYW3	569 aa	Predicted RBP	13.11	□□□□□ -0.31
LMBR1L-223	ENST00000551854	OTUD7B	Q6GQQ9	843 aa		13.11	□□□□□ -0.31
LMBR1L-223	ENST00000551854	NBPF11	Q86T75	865 aa		13.11	□□□□□ -0.31
LMBR1L-223	ENST00000551854	SLC17A8	Q8NDX2	589 aa		13.11	□□□□□ -0.31
LMBR1L-223	ENST00000551854	SLC10A4	Q96EP9	437 aa		13.11	□□□□□ -0.31
LMBR1L-223	ENST00000551854	COL1A1	P02452	1464 aa	Predicted RBP	13.1	□□□□□ -0.31
LMBR1L-223	ENST00000551854	SASH1	O94885	1247 aa		13.1	□□□□□ -0.31
LMBR1L-223	ENST00000551854	ATP2B4	P23634	1241 aa		13.1	□□□□□ -0.31
LMBR1L-223	ENST00000551854	TRIM28	Q13263	835 aa	Known RBP	13.1	□□□□□ -0.31
LMBR1L-223	ENST00000551854	CRHR2	Q13324	411 aa		13.1	□□□□□ -0.31
LMBR1L-223	ENST00000551854	SLC9C1	Q4G0N8	1177 aa		13.1	□□□□□ -0.31
LMBR1L-223	ENST00000551854	ANKRD13D	Q6ZTN6	518 aa		13.1	□□□□□ -0.31
LMBR1L-223	ENST00000551854	WNK4	Q96J92	1243 aa		13.1	□□□□□ -0.31
LMBR1L-223	ENST00000551854	PNN	Q9H307	717 aa	Known RBP	13.1	□□□□□ -0.31
LMBR1L-223	ENST00000551854	SEC31B	Q9NQW1	1179 aa		13.1	□□□□□ -0.31
LMBR1L-223	ENST00000551854	DLG5	Q8TDM6	1919 aa		13.09	□□□□□ -0.31
LMBR1L-223	ENST00000551854	PSME4	Q14997	1843 aa		13.09	□□□□□ -0.31
LMBR1L-223	ENST00000551854	UNCX	A6NJT0	531 aa		13.09	□□□□□ -0.31
LMBR1L-223	ENST00000551854	SP3	Q02447	781 aa		13.09	□□□□□ -0.31
LMBR1L-223	ENST00000551854	ARHGEF6	Q15052	776 aa		13.09	□□□□□ -0.31
LMBR1L-223	ENST00000551854	MAP3K11	Q16584	847 aa		13.09	□□□□□ -0.31
LMBR1L-223	ENST00000551854	SLC4A8	Q2Y0W8	1093 aa		13.09	□□□□□ -0.31
LMBR1L-223	ENST00000551854	CCDC152	Q4G0S7	254 aa		13.09	□□□□□ -0.31
LMBR1L-223	ENST00000551854	DACT2	Q5SW24	774 aa		13.09	□□□□□ -0.31
LMBR1L-223	ENST00000551854	CHRDL2	Q6WN34	429 aa		13.09	□□□□□ -0.31
LMBR1L-223	ENST00000551854	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.09	□□□□□ -0.31
LMBR1L-223	ENST00000551854	CHPF2	Q9P2E5	772 aa		13.09	□□□□□ -0.31
LMBR1L-223	ENST00000551854	MED23	Q9ULK4	1368 aa		13.08	□□□□□ -0.31
LMBR1L-223	ENST00000551854	PPP1R12B	O60237	982 aa	Predicted RBP	13.08	□□□□□ -0.32
LMBR1L-223	ENST00000551854	STRIP1	Q5VSL9	837 aa		13.08	□□□□□ -0.32
LMBR1L-223	ENST00000551854	LAMA3	Q16787	3333 aa		13.08	□□□□□ -0.32
LMBR1L-223	ENST00000551854	ANKRD18A	Q8IVF6	992 aa		13.07	□□□□□ -0.32
LMBR1L-223	ENST00000551854	FBXW7	Q969H0	707 aa		13.07	□□□□□ -0.32
LMBR1L-223	ENST00000551854	CLMN	Q96JQ2	1002 aa		13.07	□□□□□ -0.32
LMBR1L-223	ENST00000551854	MXD3	Q9BW11	206 aa		13.07	□□□□□ -0.32
LMBR1L-223	ENST00000551854	PPP2R3B	Q9Y5P8	575 aa		13.07	□□□□□ -0.32
LMBR1L-223	ENST00000551854	LMOD3	Q0VAK6	560 aa		13.06	□□□□□ -0.32
LMBR1L-223	ENST00000551854	HDGFL1	Q5TGJ6	251 aa		13.06	□□□□□ -0.32
LMBR1L-223	ENST00000551854	DEFB129	Q9H1M3	183 aa		13.06	□□□□□ -0.32
LMBR1L-223	ENST00000551854	RBM27	Q9P2N5	1060 aa	Known RBP	13.06	□□□□□ -0.32
LMBR1L-223	ENST00000551854	DBF4	Q9UBU7	674 aa	Predicted RBP	13.06	□□□□□ -0.32
LMBR1L-223	ENST00000551854	FZD1	Q9UP38	647 aa		13.06	□□□□□ -0.32
LMBR1L-223	ENST00000551854	PTCH2	Q9Y6C5	1203 aa		13.06	□□□□□ -0.32
LMBR1L-223	ENST00000551854	HOXB7	P09629	217 aa		13.05	□□□□□ -0.32
LMBR1L-223	ENST00000551854	CAP1	Q01518	475 aa		13.05	□□□□□ -0.32
LMBR1L-223	ENST00000551854	ZBED3	Q96IU2	234 aa	Predicted RBP	13.05	□□□□□ -0.32
LMBR1L-223	ENST00000551854	COA1	Q9GZY4	146 aa		13.05	□□□□□ -0.32
LMBR1L-223	ENST00000551854	HYPK	Q9NX55	129 aa		13.05	□□□□□ -0.32
LMBR1L-223	ENST00000551854	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.05	□□□□□ -0.32
LMBR1L-223	ENST00000551854	SSC5D	A1L4H1	1573 aa		13.05	□□□□□ -0.32
LMBR1L-223	ENST00000551854	TESPA1	A2RU30	521 aa	Predicted RBP	13.04	□□□□□ -0.32
LMBR1L-223	ENST00000551854	PDE8A	O60658	829 aa		13.04	□□□□□ -0.32
LMBR1L-223	ENST00000551854	IREB2	P48200	963 aa	Known RBP	13.04	□□□□□ -0.32
LMBR1L-223	ENST00000551854	RIPK4	P57078	832 aa		13.04	□□□□□ -0.32
LMBR1L-223	ENST00000551854	KIAA0825	Q8IV33	1275 aa		13.04	□□□□□ -0.32
LMBR1L-223	ENST00000551854	CDC5L	Q99459	802 aa	Known RBP	13.04	□□□□□ -0.32
LMBR1L-223	ENST00000551854	PTPN18	Q99952	460 aa		13.04	□□□□□ -0.32
LMBR1L-223	ENST00000551854	LAMB1	P07942	1786 aa		13.03	□□□□□ -0.32
LMBR1L-223	ENST00000551854	PCCA	P05165	728 aa	Predicted RBP	13.03	□□□□□ -0.32
LMBR1L-223	ENST00000551854	GJA5	P36382	358 aa		13.03	□□□□□ -0.32
LMBR1L-223	ENST00000551854	KRT24	Q2M2I5	525 aa		13.03	□□□□□ -0.32
LMBR1L-223	ENST00000551854	SUPT20HL1	Q3ZLR7	823 aa		13.03	□□□□□ -0.32
LMBR1L-223	ENST00000551854	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.03	□□□□□ -0.32
LMBR1L-223	ENST00000551854	CHL1	O00533	1208 aa		13.02	□□□□□ -0.33
LMBR1L-223	ENST00000551854	GOLGA2	Q08379	1002 aa		13.02	□□□□□ -0.33
LMBR1L-223	ENST00000551854	DLGAP5	Q15398	846 aa		13.02	□□□□□ -0.33
LMBR1L-223	ENST00000551854	TTLL5	Q6EMB2	1281 aa		13.02	□□□□□ -0.33
LMBR1L-223	ENST00000551854	ANKRD13A	Q8IZ07	590 aa		13.02	□□□□□ -0.33
LMBR1L-223	ENST00000551854	CCDC191	Q8NCU4	936 aa		13.02	□□□□□ -0.33
LMBR1L-223	ENST00000551854	DPF3	Q92784	378 aa		13.02	□□□□□ -0.33
LMBR1L-223	ENST00000551854	BSDC1	Q9NW68	430 aa	Predicted RBP	13.02	□□□□□ -0.33
LMBR1L-223	ENST00000551854	ZNF804B	A4D1E1	1349 aa		13.02	□□□□□ -0.33
LMBR1L-223	ENST00000551854	WTIP	A6NIX2	430 aa	Predicted RBP	13.01	□□□□□ -0.33
LMBR1L-223	ENST00000551854	MYC	P01106	439 aa	Predicted RBP	13.01	□□□□□ -0.33
LMBR1L-223	ENST00000551854	MNX1	P50219	401 aa	Predicted RBP	13.01	□□□□□ -0.33
LMBR1L-223	ENST00000551854	CCT4	P50991	539 aa	Known RBP	13.01	□□□□□ -0.33
LMBR1L-223	ENST00000551854	RIC3	Q7Z5B4	369 aa		13.01	□□□□□ -0.33
LMBR1L-223	ENST00000551854	MTMR14	Q8NCE2	650 aa		13.01	□□□□□ -0.33
LMBR1L-223	ENST00000551854	PRO3102	Q9H379	93 aa		13.01	□□□□□ -0.33
LMBR1L-223	ENST00000551854	ZFYVE28	Q9HCC9	887 aa		13.01	□□□□□ -0.33
LMBR1L-223	ENST00000551854	MINPP1	Q9UNW1	487 aa		13.01	□□□□□ -0.33
LMBR1L-223	ENST00000551854	MYO1B	O43795	1136 aa		13	□□□□□ -0.33
LMBR1L-223	ENST00000551854	CTSW	P56202	376 aa		13	□□□□□ -0.33
LMBR1L-223	ENST00000551854	TAF1C	Q15572	869 aa	Predicted RBP	13	□□□□□ -0.33
LMBR1L-223	ENST00000551854	SH3TC2	Q8TF17	1288 aa		13	□□□□□ -0.33
LMBR1L-223	ENST00000551854	OPTN	Q96CV9	577 aa		13	□□□□□ -0.33
LMBR1L-223	ENST00000551854	HTATIP2	Q9BUP3	242 aa		13	□□□□□ -0.33
LMBR1L-223	ENST00000551854	CWC25	Q9NXE8	425 aa	Predicted RBP	13	□□□□□ -0.33
LMBR1L-223	ENST00000551854	LEMD3	Q9Y2U8	911 aa		13	□□□□□ -0.33
LMBR1L-223	ENST00000551854	ZNF646	O15015	1829 aa	Predicted RBP	12.99	□□□□□ -0.33
LMBR1L-223	ENST00000551854		A0A1W2PPC1	479 aa		12.99	□□□□□ -0.33
LMBR1L-223	ENST00000551854	WDHD1	O75717	1129 aa	Predicted RBP	12.99	□□□□□ -0.33
LMBR1L-223	ENST00000551854	GNRH1	P01148	92 aa		12.99	□□□□□ -0.33
LMBR1L-223	ENST00000551854	TMPO	P42166	694 aa	Known RBP	12.99	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms