RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 ZNF804BA4D1E1 1349 aa16.51■□□□□ 0.23
NPAS3-209ENST00000551008 HSPA1AP0DMV8 641 aaKnown RBP16.51■□□□□ 0.23
NPAS3-209ENST00000551008 HSPA1BP0DMV9 641 aaKnown RBP16.51■□□□□ 0.23
NPAS3-209ENST00000551008 ALDH1L2Q3SY69 923 aa16.51■□□□□ 0.23
NPAS3-209ENST00000551008 DACT2Q5SW24 774 aa16.51■□□□□ 0.23
NPAS3-209ENST00000551008 PODNQ7Z5L7 613 aa16.51■□□□□ 0.23
NPAS3-209ENST00000551008 MIER1Q8N108 512 aa16.51■□□□□ 0.23
NPAS3-209ENST00000551008 ANKRD44Q8N8A2 993 aa16.51■□□□□ 0.23
NPAS3-209ENST00000551008 HELBQ8NG08 1087 aaPredicted RBP16.51■□□□□ 0.23
NPAS3-209ENST00000551008 TAF5LO75529 589 aa16.5■□□□□ 0.23
NPAS3-209ENST00000551008 IFIT5Q13325 482 aaKnown RBP16.5■□□□□ 0.23
NPAS3-209ENST00000551008 RABL6Q3YEC7 729 aaPredicted RBP16.5■□□□□ 0.23
NPAS3-209ENST00000551008 MPHOSPH8Q99549 860 aa16.5■□□□□ 0.23
NPAS3-209ENST00000551008 C9orf78Q9NZ63 289 aaPredicted RBP16.5■□□□□ 0.23
NPAS3-209ENST00000551008 CHMP3Q9Y3E7 222 aa16.5■□□□□ 0.23
NPAS3-209ENST00000551008 ARAP2Q8WZ64 1704 aa16.5■□□□□ 0.23
NPAS3-209ENST00000551008 ECM29Q5VYK3 1845 aa16.49■□□□□ 0.23
NPAS3-209ENST00000551008 USP17L3A6NCW0 530 aa16.49■□□□□ 0.23
NPAS3-209ENST00000551008 USP17L4A6NCW7 530 aa16.49■□□□□ 0.23
NPAS3-209ENST00000551008 KIF4BQ2VIQ3 1234 aa16.49■□□□□ 0.23
NPAS3-209ENST00000551008 USP17L1Q7RTZ2 530 aa16.49■□□□□ 0.23
NPAS3-209ENST00000551008 AGBL3Q8NEM8 1001 aa16.49■□□□□ 0.23
NPAS3-209ENST00000551008 ANKRD2Q9GZV1 360 aa16.49■□□□□ 0.23
NPAS3-209ENST00000551008 USP44Q9H0E7 712 aa16.49■□□□□ 0.23
NPAS3-209ENST00000551008 BICC1Q9H694 974 aaKnown RBP16.49■□□□□ 0.23
NPAS3-209ENST00000551008 ADM5C9JUS6 153 aa16.48■□□□□ 0.23
NPAS3-209ENST00000551008 G3V3G9 751 aa16.48■□□□□ 0.23
NPAS3-209ENST00000551008 RBM26Q5T8P6 1007 aaKnown RBP16.48■□□□□ 0.23
NPAS3-209ENST00000551008 DCAF8Q5TAQ9 597 aa16.48■□□□□ 0.23
NPAS3-209ENST00000551008 C15orf52Q6ZUT6 534 aaKnown RBP16.48■□□□□ 0.23
NPAS3-209ENST00000551008 USP48Q86UV5 1035 aa16.48■□□□□ 0.23
NPAS3-209ENST00000551008 PUS3Q9BZE2 481 aaKnown RBP16.48■□□□□ 0.23
NPAS3-209ENST00000551008 COA1Q9GZY4 146 aa16.48■□□□□ 0.23
NPAS3-209ENST00000551008 SMC4Q9NTJ3 1288 aa16.48■□□□□ 0.23
NPAS3-209ENST00000551008 TLL2Q9Y6L7 1015 aa16.48■□□□□ 0.23
NPAS3-209ENST00000551008 CELF2O95319 508 aaKnown RBP16.47■□□□□ 0.23
NPAS3-209ENST00000551008 BRPF1P55201 1214 aaPredicted RBP16.47■□□□□ 0.23
NPAS3-209ENST00000551008 DEFB115Q30KQ5 88 aa16.47■□□□□ 0.23
NPAS3-209ENST00000551008 CDC37L1Q7L3B6 337 aa16.47■□□□□ 0.23
NPAS3-209ENST00000551008 GGA3Q9NZ52 723 aa16.47■□□□□ 0.23
NPAS3-209ENST00000551008 ABT1Q9ULW3 272 aaKnown RBP16.47■□□□□ 0.23
NPAS3-209ENST00000551008 CCDC57Q2TAC2 916 aa16.46■□□□□ 0.23
NPAS3-209ENST00000551008 COL13A1Q5TAT6 717 aaPredicted RBP16.46■□□□□ 0.23
NPAS3-209ENST00000551008 STRIP1Q5VSL9 837 aa16.46■□□□□ 0.23
NPAS3-209ENST00000551008 LDHAL6AQ6ZMR3 332 aa16.46■□□□□ 0.23
NPAS3-209ENST00000551008 SAPCD2Q86UD0 394 aa16.46■□□□□ 0.23
NPAS3-209ENST00000551008 CD209Q9NNX6 404 aa16.46■□□□□ 0.23
NPAS3-209ENST00000551008 CT47B1P0C2W7 299 aaPredicted RBP16.45■□□□□ 0.22
NPAS3-209ENST00000551008 USP17L8P0C7I0 530 aa16.45■□□□□ 0.22
NPAS3-209ENST00000551008 RARSP54136 660 aaKnown RBP16.45■□□□□ 0.22
NPAS3-209ENST00000551008 DIEXFQ68CQ4 756 aaKnown RBP16.45■□□□□ 0.22
NPAS3-209ENST00000551008 CYP4F22Q6NT55 531 aa16.45■□□□□ 0.22
NPAS3-209ENST00000551008 KRT26Q7Z3Y9 468 aa16.45■□□□□ 0.22
NPAS3-209ENST00000551008 CERS5Q8N5B7 392 aa16.45■□□□□ 0.22
NPAS3-209ENST00000551008 MYOZ2Q9NPC6 264 aa16.45■□□□□ 0.22
NPAS3-209ENST00000551008 RIPOR2Q9Y4F9 1068 aa16.45■□□□□ 0.22
NPAS3-209ENST00000551008 WDR33Q9C0J8 1336 aaKnown RBP16.45■□□□□ 0.22
NPAS3-209ENST00000551008 FOXN1O15353 648 aa16.44■□□□□ 0.22
NPAS3-209ENST00000551008 CAPNS2Q96L46 248 aa16.44■□□□□ 0.22
NPAS3-209ENST00000551008 NOB1Q9ULX3 412 aaKnown RBP16.44■□□□□ 0.22
NPAS3-209ENST00000551008 IL1R1P14778 569 aa16.43■□□□□ 0.22
NPAS3-209ENST00000551008 RFX5P48382 616 aaPredicted RBP16.43■□□□□ 0.22
NPAS3-209ENST00000551008 GTF2IP78347 998 aa16.43■□□□□ 0.22
NPAS3-209ENST00000551008 SCARF1Q14162 830 aa16.43■□□□□ 0.22
NPAS3-209ENST00000551008 LRRC24Q50LG9 513 aa16.43■□□□□ 0.22
NPAS3-209ENST00000551008 VGLL2Q8N8G2 317 aa16.43■□□□□ 0.22
NPAS3-209ENST00000551008 KLHDC4Q8TBB5 520 aa16.43■□□□□ 0.22
NPAS3-209ENST00000551008 ZBED3Q96IU2 234 aaPredicted RBP16.43■□□□□ 0.22
NPAS3-209ENST00000551008 ZNF408Q9H9D4 720 aa16.43■□□□□ 0.22
NPAS3-209ENST00000551008 CNNM1Q9NRU3 951 aa16.43■□□□□ 0.22
NPAS3-209ENST00000551008 WBP1LQ9NX94 342 aa16.43■□□□□ 0.22
NPAS3-209ENST00000551008 MYH13Q9UKX3 1938 aa16.43■□□□□ 0.22
NPAS3-209ENST00000551008 PLIN1O60240 522 aa16.42■□□□□ 0.22
NPAS3-209ENST00000551008 KCNJ4P48050 445 aa16.42■□□□□ 0.22
NPAS3-209ENST00000551008 NBPF9Q3BBW0 867 aa16.42■□□□□ 0.22
NPAS3-209ENST00000551008 ANGEL2Q5VTE6 544 aaKnown RBP16.42■□□□□ 0.22
NPAS3-209ENST00000551008 TTLL5Q6EMB2 1281 aa16.42■□□□□ 0.22
NPAS3-209ENST00000551008 SCAF8Q9UPN6 1271 aaKnown RBP16.42■□□□□ 0.22
NPAS3-209ENST00000551008 TNNQ9UQP3 1299 aa16.42■□□□□ 0.22
NPAS3-209ENST00000551008 PAPPA2Q9BXP8 1791 aa16.41■□□□□ 0.22
NPAS3-209ENST00000551008 AOC2O75106 756 aa16.41■□□□□ 0.22
NPAS3-209ENST00000551008 TAF7LQ5H9L4 462 aa16.41■□□□□ 0.22
NPAS3-209ENST00000551008 IFFO2Q5TF58 517 aa16.41■□□□□ 0.22
NPAS3-209ENST00000551008 FBXW7Q969H0 707 aa16.41■□□□□ 0.22
NPAS3-209ENST00000551008 PCDHAC2Q9Y5I4 1007 aa16.41■□□□□ 0.22
NPAS3-209ENST00000551008 AOX1Q06278 1338 aa16.41■□□□□ 0.22
NPAS3-209ENST00000551008 MYO3BQ8WXR4 1341 aa16.41■□□□□ 0.22
NPAS3-209ENST00000551008 PITPNM2Q9BZ72 1349 aa16.41■□□□□ 0.22
NPAS3-209ENST00000551008 WNT10BO00744 389 aa16.4■□□□□ 0.22
NPAS3-209ENST00000551008 SASH1O94885 1247 aa16.4■□□□□ 0.22
NPAS3-209ENST00000551008 KIAA0825Q8IV33 1275 aa16.4■□□□□ 0.22
NPAS3-209ENST00000551008 DCPSQ96C86 337 aaKnown RBP16.4■□□□□ 0.22
NPAS3-209ENST00000551008 CDCA5Q96FF9 252 aa16.4■□□□□ 0.22
NPAS3-209ENST00000551008 HHIPL1Q96JK4 782 aa16.4■□□□□ 0.22
NPAS3-209ENST00000551008 FAM84BQ96KN1 310 aaPredicted RBP16.4■□□□□ 0.22
NPAS3-209ENST00000551008 ZIC5Q96T25 663 aa16.4■□□□□ 0.22
NPAS3-209ENST00000551008 GYG1P46976 350 aa16.39■□□□□ 0.21
NPAS3-209ENST00000551008 UBE4AQ14139 1066 aa16.39■□□□□ 0.21
NPAS3-209ENST00000551008 TDRD7Q8NHU6 1098 aaKnown RBP16.39■□□□□ 0.21
NPAS3-209ENST00000551008 JAG2Q9Y219 1238 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms