RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 MRGPRX2Q96LB1 330 aa10.93□□□□□ -0.66
LETMD1-225ENST00000550715 KIAA1551Q9HCM1 1747 aa10.92□□□□□ -0.66
LETMD1-225ENST00000550715 TNRC6CQ9HCJ0 1690 aaKnown RBP10.92□□□□□ -0.66
LETMD1-225ENST00000550715 GLTPD2A6NH11 291 aa10.92□□□□□ -0.66
LETMD1-225ENST00000550715 TMEM88BA6NKF7 163 aa10.92□□□□□ -0.66
LETMD1-225ENST00000550715 ERVH48-1M5A8F1 160 aa10.92□□□□□ -0.66
LETMD1-225ENST00000550715 PTK7Q13308 1070 aa10.92□□□□□ -0.66
LETMD1-225ENST00000550715 ZNF697Q5TEC3 545 aa10.92□□□□□ -0.66
LETMD1-225ENST00000550715 TMEM164Q5U3C3 297 aa10.92□□□□□ -0.66
LETMD1-225ENST00000550715 SPRYD7Q5W111 196 aa10.92□□□□□ -0.66
LETMD1-225ENST00000550715 MPHOSPH9Q99550 1183 aa10.92□□□□□ -0.66
LETMD1-225ENST00000550715 KIAA1024Q9UPX6 916 aa10.92□□□□□ -0.66
LETMD1-225ENST00000550715 USP54Q70EL1 1684 aa10.92□□□□□ -0.66
LETMD1-225ENST00000550715 WNT7AO00755 349 aa10.91□□□□□ -0.66
LETMD1-225ENST00000550715 SCTRP47872 440 aa10.91□□□□□ -0.66
LETMD1-225ENST00000550715 GTF2IP78347 998 aa10.91□□□□□ -0.66
LETMD1-225ENST00000550715 FOXC1Q12948 553 aa10.91□□□□□ -0.66
LETMD1-225ENST00000550715 TRIM50Q86XT4 487 aa10.91□□□□□ -0.66
LETMD1-225ENST00000550715 ANKRD24Q8TF21 1146 aa10.91□□□□□ -0.66
LETMD1-225ENST00000550715 DCAF5Q96JK2 942 aa10.91□□□□□ -0.66
LETMD1-225ENST00000550715 TMPRSS4Q9NRS4 437 aa10.91□□□□□ -0.66
LETMD1-225ENST00000550715 DNAAF2Q9NVR5 837 aaKnown RBP10.91□□□□□ -0.66
LETMD1-225ENST00000550715 PKD1L3Q7Z443 1732 aa10.91□□□□□ -0.66
LETMD1-225ENST00000550715 QRICH2Q9H0J4 1663 aa10.91□□□□□ -0.66
LETMD1-225ENST00000550715 SIAH2O43255 324 aa10.9□□□□□ -0.66
LETMD1-225ENST00000550715 ELOAQ14241 798 aaKnown RBP10.9□□□□□ -0.66
LETMD1-225ENST00000550715 CDK15Q96Q40 435 aa10.9□□□□□ -0.66
LETMD1-225ENST00000550715 SBF1O95248 1867 aa10.89□□□□□ -0.67
LETMD1-225ENST00000550715 GRM5P41594 1212 aa10.89□□□□□ -0.67
LETMD1-225ENST00000550715 PDE4CQ08493 712 aa10.89□□□□□ -0.67
LETMD1-225ENST00000550715 PPARGC1BQ86YN6 1023 aaKnown RBP10.89□□□□□ -0.67
LETMD1-225ENST00000550715 PRKD2Q9BZL6 878 aa10.89□□□□□ -0.67
LETMD1-225ENST00000550715 CYLDQ9NQC7 956 aa10.89□□□□□ -0.67
LETMD1-225ENST00000550715 PIM2Q9P1W9 311 aa10.89□□□□□ -0.67
LETMD1-225ENST00000550715 C5P01031 1676 aa10.89□□□□□ -0.67
LETMD1-225ENST00000550715 KIF13BQ9NQT8 1826 aa10.88□□□□□ -0.67
LETMD1-225ENST00000550715 TTC21BQ7Z4L5 1316 aa10.88□□□□□ -0.67
LETMD1-225ENST00000550715 ADH1CP00326 375 aa10.88□□□□□ -0.67
LETMD1-225ENST00000550715 ATP1A2P50993 1020 aa10.88□□□□□ -0.67
LETMD1-225ENST00000550715 DPYDQ12882 1025 aa10.88□□□□□ -0.67
LETMD1-225ENST00000550715 ANKMY2Q8IV38 441 aa10.88□□□□□ -0.67
LETMD1-225ENST00000550715 DOT1LQ8TEK3 1739 aa10.87□□□□□ -0.67
LETMD1-225ENST00000550715 TOGARAM1Q9Y4F4 1720 aa10.87□□□□□ -0.67
LETMD1-225ENST00000550715 TAF1LQ8IZX4 1826 aa10.87□□□□□ -0.67
LETMD1-225ENST00000550715 MYCP01106 439 aaPredicted RBP10.87□□□□□ -0.67
LETMD1-225ENST00000550715 SSFA2P28290 1259 aa10.87□□□□□ -0.67
LETMD1-225ENST00000550715 RASSF7Q02833 373 aa10.87□□□□□ -0.67
LETMD1-225ENST00000550715 DALRD3Q5D0E6 543 aaKnown RBP10.87□□□□□ -0.67
LETMD1-225ENST00000550715 TPCN2Q8NHX9 752 aa10.87□□□□□ -0.67
LETMD1-225ENST00000550715 ZCRB1Q8TBF4 217 aaKnown RBP10.87□□□□□ -0.67
LETMD1-225ENST00000550715 FAM200AQ8TCP9 573 aa10.87□□□□□ -0.67
LETMD1-225ENST00000550715 NFAT5O94916 1531 aa10.86□□□□□ -0.67
LETMD1-225ENST00000550715 ALDH1A1P00352 501 aa10.86□□□□□ -0.67
LETMD1-225ENST00000550715 NR3C2P08235 984 aa10.86□□□□□ -0.67
LETMD1-225ENST00000550715 USP4Q13107 963 aa10.86□□□□□ -0.67
LETMD1-225ENST00000550715 ZNF598Q86UK7 904 aaKnown RBP10.86□□□□□ -0.67
LETMD1-225ENST00000550715 CCDC116Q8IYX3 515 aa10.86□□□□□ -0.67
LETMD1-225ENST00000550715 DCAF11Q8TEB1 546 aa10.86□□□□□ -0.67
LETMD1-225ENST00000550715 MCOLN1Q9GZU1 580 aa10.86□□□□□ -0.67
LETMD1-225ENST00000550715 PODXL2Q9NZ53 605 aa10.86□□□□□ -0.67
LETMD1-225ENST00000550715 PCDHGA11Q9Y5H2 935 aa10.86□□□□□ -0.67
LETMD1-225ENST00000550715 PALLDQ8WX93 1383 aa10.86□□□□□ -0.67
LETMD1-225ENST00000550715 BRCA1P38398 1863 aaKnown RBP10.85□□□□□ -0.67
LETMD1-225ENST00000550715 UBR3Q6ZT12 1888 aa10.85□□□□□ -0.67
LETMD1-225ENST00000550715 ZBTB7BO15156 539 aaPredicted RBP10.85□□□□□ -0.67
LETMD1-225ENST00000550715 KCTD17Q8N5Z5 321 aa10.85□□□□□ -0.67
LETMD1-225ENST00000550715 PKD2L1Q9P0L9 805 aa10.85□□□□□ -0.67
LETMD1-225ENST00000550715 VIRMAQ69YN4 1812 aaKnown RBP10.85□□□□□ -0.67
LETMD1-225ENST00000550715 C4BP0C0L5 1744 aa10.84□□□□□ -0.67
LETMD1-225ENST00000550715 ARFGEF1Q9Y6D6 1849 aa10.84□□□□□ -0.67
LETMD1-225ENST00000550715 CHRNA5P30532 468 aa10.84□□□□□ -0.67
LETMD1-225ENST00000550715 TMF1P82094 1093 aa10.84□□□□□ -0.67
LETMD1-225ENST00000550715 MAP2K1Q02750 393 aaPredicted RBP10.84□□□□□ -0.67
LETMD1-225ENST00000550715 DHX9Q08211 1270 aaKnown RBP10.84□□□□□ -0.67
LETMD1-225ENST00000550715 PPP1R26Q5T8A7 1209 aaPredicted RBP10.84□□□□□ -0.67
LETMD1-225ENST00000550715 CCDC102BQ68D86 513 aa10.84□□□□□ -0.67
LETMD1-225ENST00000550715 CC2D2BQ6DHV5 1058 aa10.84□□□□□ -0.67
LETMD1-225ENST00000550715 MPRIPQ6WCQ1 1025 aa10.84□□□□□ -0.67
LETMD1-225ENST00000550715 LARGE2Q8N3Y3 721 aa10.84□□□□□ -0.67
LETMD1-225ENST00000550715 MPNDQ8N594 471 aa10.84□□□□□ -0.67
LETMD1-225ENST00000550715 LINC00116Q8NCU8 138 aa10.84□□□□□ -0.67
LETMD1-225ENST00000550715 LTV1Q96GA3 475 aaPredicted RBP10.84□□□□□ -0.67
LETMD1-225ENST00000550715 CCDC87Q9NVE4 849 aa10.84□□□□□ -0.67
LETMD1-225ENST00000550715 PASKQ96RG2 1323 aa10.84□□□□□ -0.67
LETMD1-225ENST00000550715 SFI1A8K8P3 1242 aa10.83□□□□□ -0.68
LETMD1-225ENST00000550715 STAU1O95793 577 aaKnown RBP10.83□□□□□ -0.68
LETMD1-225ENST00000550715 LMNB1P20700 586 aa10.83□□□□□ -0.68
LETMD1-225ENST00000550715 HMGB2P26583 209 aaKnown RBP10.83□□□□□ -0.68
LETMD1-225ENST00000550715 ERVK-9P63128 1117 aa10.83□□□□□ -0.68
LETMD1-225ENST00000550715 SIX5Q8N196 739 aa10.83□□□□□ -0.68
LETMD1-225ENST00000550715 NLGN1Q8N2Q7 840 aa10.83□□□□□ -0.68
LETMD1-225ENST00000550715 TNFRSF10AO00220 468 aa10.82□□□□□ -0.68
LETMD1-225ENST00000550715 DKK1O94907 266 aa10.82□□□□□ -0.68
LETMD1-225ENST00000550715 NR5A1Q13285 461 aa10.82□□□□□ -0.68
LETMD1-225ENST00000550715 DEFB115Q30KQ5 88 aa10.82□□□□□ -0.68
LETMD1-225ENST00000550715 RBM19Q9Y4C8 960 aaKnown RBP10.82□□□□□ -0.68
LETMD1-225ENST00000550715 KDM6AO15550 1401 aaPredicted RBP10.82□□□□□ -0.68
LETMD1-225ENST00000550715 WDR33Q9C0J8 1336 aaKnown RBP10.82□□□□□ -0.68
LETMD1-225ENST00000550715 LGR5O75473 907 aa10.81□□□□□ -0.68
LETMD1-225ENST00000550715 NNTQ13423 1086 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms