RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 RAPGEF3O95398 923 aa8.16□□□□□ -1.1
PFDN5-209ENST00000550069 ADAMTSL3P82987 1691 aa8.16□□□□□ -1.1
PFDN5-209ENST00000550069 C8orf86Q6ZUL3 223 aa8.16□□□□□ -1.1
PFDN5-209ENST00000550069 FGD6Q6ZV73 1430 aa8.16□□□□□ -1.1
PFDN5-209ENST00000550069 CHSY3Q70JA7 882 aa8.16□□□□□ -1.1
PFDN5-209ENST00000550069 NEDD1Q8NHV4 660 aa8.16□□□□□ -1.1
PFDN5-209ENST00000550069 PTPN23Q9H3S7 1636 aa8.16□□□□□ -1.1
PFDN5-209ENST00000550069 EIF2AK4Q9P2K8 1649 aaKnown RBP8.16□□□□□ -1.1
PFDN5-209ENST00000550069 DIP2CQ9Y2E4 1556 aa8.16□□□□□ -1.1
PFDN5-209ENST00000550069 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.16□□□□□ -1.1
PFDN5-209ENST00000550069 CROCC2H7BZ55 1655 aa8.15□□□□□ -1.1
PFDN5-209ENST00000550069 DNMT1P26358 1616 aaKnown RBP8.15□□□□□ -1.1
PFDN5-209ENST00000550069 ARHGEF12Q9NZN5 1544 aa8.15□□□□□ -1.1
PFDN5-209ENST00000550069 ADH7P40394 386 aa8.15□□□□□ -1.1
PFDN5-209ENST00000550069 MLLT1Q03111 559 aaPredicted RBP8.15□□□□□ -1.1
PFDN5-209ENST00000550069 EDEM1Q92611 657 aa8.15□□□□□ -1.1
PFDN5-209ENST00000550069 TNFRSF25Q93038 417 aa8.15□□□□□ -1.1
PFDN5-209ENST00000550069 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.15□□□□□ -1.1
PFDN5-209ENST00000550069 TRAPPC8Q9Y2L5 1435 aa8.14□□□□□ -1.11
PFDN5-209ENST00000550069 ELOA3CA0A087WX78 387 aaPredicted RBP8.14□□□□□ -1.11
PFDN5-209ENST00000550069 ELOA3DA6NLF2 546 aaPredicted RBP8.14□□□□□ -1.11
PFDN5-209ENST00000550069 H3BRB1 525 aa8.14□□□□□ -1.11
PFDN5-209ENST00000550069 EPB42P16452 691 aa8.14□□□□□ -1.11
PFDN5-209ENST00000550069 NPR3P17342 541 aa8.14□□□□□ -1.11
PFDN5-209ENST00000550069 PLAURQ03405 335 aa8.14□□□□□ -1.11
PFDN5-209ENST00000550069 ELOA3BQ3SY89 546 aa8.14□□□□□ -1.11
PFDN5-209ENST00000550069 ELOA3Q8NG57 546 aa8.14□□□□□ -1.11
PFDN5-209ENST00000550069 NUDT16Q96DE0 195 aaKnown RBP8.14□□□□□ -1.11
PFDN5-209ENST00000550069 TUT1Q9H6E5 874 aaKnown RBP8.14□□□□□ -1.11
PFDN5-209ENST00000550069 CCDC87Q9NVE4 849 aa8.14□□□□□ -1.11
PFDN5-209ENST00000550069 DNAJB12Q9NXW2 375 aaKnown RBP8.14□□□□□ -1.11
PFDN5-209ENST00000550069 MROH2AA6NES4 1674 aa8.14□□□□□ -1.11
PFDN5-209ENST00000550069 A2MP01023 1474 aa8.13□□□□□ -1.11
PFDN5-209ENST00000550069 DHX29Q7Z478 1369 aaKnown RBP8.13□□□□□ -1.11
PFDN5-209ENST00000550069 ADARB2-AS1A8MUL3 147 aa8.13□□□□□ -1.11
PFDN5-209ENST00000550069 FZD6O60353 706 aa8.13□□□□□ -1.11
PFDN5-209ENST00000550069 EGFRP00533 1210 aa8.13□□□□□ -1.11
PFDN5-209ENST00000550069 ALBP02768 609 aa8.13□□□□□ -1.11
PFDN5-209ENST00000550069 RARAP10276 462 aa8.13□□□□□ -1.11
PFDN5-209ENST00000550069 DGKGP49619 791 aa8.13□□□□□ -1.11
PFDN5-209ENST00000550069 DNM1Q05193 864 aaKnown RBP8.13□□□□□ -1.11
PFDN5-209ENST00000550069 NOM1Q5C9Z4 860 aaKnown RBP8.13□□□□□ -1.11
PFDN5-209ENST00000550069 AFAP1Q8N556 730 aa8.13□□□□□ -1.11
PFDN5-209ENST00000550069 ABTB2Q8N961 1025 aa8.13□□□□□ -1.11
PFDN5-209ENST00000550069 PNMA5Q96PV4 448 aa8.13□□□□□ -1.11
PFDN5-209ENST00000550069 UBE2OQ9C0C9 1292 aaKnown RBP8.13□□□□□ -1.11
PFDN5-209ENST00000550069 GGNBP2Q9H3C7 697 aa8.13□□□□□ -1.11
PFDN5-209ENST00000550069 LRRC4BQ9NT99 713 aa8.13□□□□□ -1.11
PFDN5-209ENST00000550069 ABCA6Q8N139 1617 aa8.13□□□□□ -1.11
PFDN5-209ENST00000550069 ADGRL2O95490 1459 aa8.13□□□□□ -1.11
PFDN5-209ENST00000550069 ROCK1Q13464 1354 aa8.12□□□□□ -1.11
PFDN5-209ENST00000550069 UBAP1LF5GYI3 381 aa8.12□□□□□ -1.11
PFDN5-209ENST00000550069 ICMTO60725 284 aa8.12□□□□□ -1.11
PFDN5-209ENST00000550069 MMP20O60882 483 aa8.12□□□□□ -1.11
PFDN5-209ENST00000550069 PDGFAP04085 211 aa8.12□□□□□ -1.11
PFDN5-209ENST00000550069 AMPD1P23109 780 aa8.12□□□□□ -1.11
PFDN5-209ENST00000550069 ARID4AP29374 1257 aaPredicted RBP8.12□□□□□ -1.11
PFDN5-209ENST00000550069 FKBP4Q02790 459 aaKnown RBP eCLIP8.12□□□□□ -1.11
PFDN5-209ENST00000550069 LINC00114Q6XXX2 140 aa8.12□□□□□ -1.11
PFDN5-209ENST00000550069 SUV39H2Q9H5I1 410 aa8.12□□□□□ -1.11
PFDN5-209ENST00000550069 RRAGCQ9HB90 399 aa8.12□□□□□ -1.11
PFDN5-209ENST00000550069 SLC6A14Q9UN76 642 aa8.12□□□□□ -1.11
PFDN5-209ENST00000550069 POLIQ9UNA4 740 aa8.12□□□□□ -1.11
PFDN5-209ENST00000550069 DUOX2Q9NRD8 1548 aa8.12□□□□□ -1.11
PFDN5-209ENST00000550069 ERBINQ96RT1 1412 aa8.12□□□□□ -1.11
PFDN5-209ENST00000550069 RRBP1Q9P2E9 1410 aaKnown RBP8.12□□□□□ -1.11
PFDN5-209ENST00000550069 ZC3H13Q5T200 1668 aaKnown RBP8.11□□□□□ -1.11
PFDN5-209ENST00000550069 ANKRD30AQ9BXX3 1397 aa8.11□□□□□ -1.11
PFDN5-209ENST00000550069 CYP2E1P05181 493 aaPredicted RBP8.11□□□□□ -1.11
PFDN5-209ENST00000550069 HNRNPMP52272 730 aaKnown RBP eCLIP8.11□□□□□ -1.11
PFDN5-209ENST00000550069 COL9A3Q14050 684 aaPredicted RBP8.11□□□□□ -1.11
PFDN5-209ENST00000550069 COL13A1Q5TAT6 717 aaPredicted RBP8.11□□□□□ -1.11
PFDN5-209ENST00000550069 HFE2Q6ZVN8 426 aa8.11□□□□□ -1.11
PFDN5-209ENST00000550069 DHX32Q7L7V1 743 aaKnown RBP8.11□□□□□ -1.11
PFDN5-209ENST00000550069 TMEM63CQ9P1W3 806 aa8.11□□□□□ -1.11
PFDN5-209ENST00000550069 FER1L4A9Z1Z3 1794 aa8.11□□□□□ -1.11
PFDN5-209ENST00000550069 YEATS2Q9ULM3 1422 aa8.11□□□□□ -1.11
PFDN5-209ENST00000550069 FAM181BA6NEQ2 426 aa8.1□□□□□ -1.11
PFDN5-209ENST00000550069 IRS1P35568 1242 aa8.1□□□□□ -1.11
PFDN5-209ENST00000550069 MARSP56192 900 aaKnown RBP8.1□□□□□ -1.11
PFDN5-209ENST00000550069 ARHGAP4P98171 946 aa8.1□□□□□ -1.11
PFDN5-209ENST00000550069 PIK3R5Q8WYR1 880 aa8.1□□□□□ -1.11
PFDN5-209ENST00000550069 ENAMQ9NRM1 1142 aa8.1□□□□□ -1.11
PFDN5-209ENST00000550069 DAPK1P53355 1430 aa8.1□□□□□ -1.11
PFDN5-209ENST00000550069 MAP3K6O95382 1288 aa8.09□□□□□ -1.11
PFDN5-209ENST00000550069 B4GALNT3Q6L9W6 998 aa8.09□□□□□ -1.11
PFDN5-209ENST00000550069 C20orf204Q6ZNR8 217 aa8.09□□□□□ -1.11
PFDN5-209ENST00000550069 NSUN5Q96P11 429 aaKnown RBP8.09□□□□□ -1.11
PFDN5-209ENST00000550069 EGFL7Q9UHF1 273 aa8.09□□□□□ -1.11
PFDN5-209ENST00000550069 RNF17Q9BXT8 1623 aaKnown RBP8.09□□□□□ -1.11
PFDN5-209ENST00000550069 KDM5DQ9BY66 1539 aa8.08□□□□□ -1.12
PFDN5-209ENST00000550069 J3QW42 95 aa8.08□□□□□ -1.12
PFDN5-209ENST00000550069 M0R082 166 aa8.08□□□□□ -1.12
PFDN5-209ENST00000550069 BRD1O95696 1058 aa8.08□□□□□ -1.12
PFDN5-209ENST00000550069 CPB1P15086 417 aa8.08□□□□□ -1.12
PFDN5-209ENST00000550069 COL8A1P27658 744 aa8.08□□□□□ -1.12
PFDN5-209ENST00000550069 SF3B2Q13435 895 aaKnown RBP8.08□□□□□ -1.12
PFDN5-209ENST00000550069 NEUROD1Q13562 356 aa8.08□□□□□ -1.12
PFDN5-209ENST00000550069 NLRP13Q86W25 1043 aa8.08□□□□□ -1.12
PFDN5-209ENST00000550069 ZNF417Q8TAU3 575 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms