RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 ZBTB40Q9NUA8 1239 aa17.04■□□□□ 0.32
LTBR-213ENST00000544454 PA2G4Q9UQ80 394 aaKnown RBP17.04■□□□□ 0.32
LTBR-213ENST00000544454 KLRK1P26718 216 aa17.03■□□□□ 0.32
LTBR-213ENST00000544454 RRP1P56182 461 aaKnown RBP17.03■□□□□ 0.32
LTBR-213ENST00000544454 POLA2Q14181 598 aa17.03■□□□□ 0.32
LTBR-213ENST00000544454 SSH3Q8TE77 659 aa17.03■□□□□ 0.32
LTBR-213ENST00000544454 C1orf115Q9H7X2 142 aa17.03■□□□□ 0.32
LTBR-213ENST00000544454 KCNQ5Q9NR82 932 aa17.03■□□□□ 0.32
LTBR-213ENST00000544454 CEP126Q9P2H0 1117 aa17.03■□□□□ 0.32
LTBR-213ENST00000544454 PSMD14O00487 310 aa17.02■□□□□ 0.32
LTBR-213ENST00000544454 VIL1P09327 827 aaKnown RBP17.02■□□□□ 0.32
LTBR-213ENST00000544454 PUM3Q15397 648 aaKnown RBP17.02■□□□□ 0.32
LTBR-213ENST00000544454 C16orf71Q8IYS4 520 aaPredicted RBP17.02■□□□□ 0.32
LTBR-213ENST00000544454 HACL1Q9UJ83 578 aa17.02■□□□□ 0.32
LTBR-213ENST00000544454 USP17L3A6NCW0 530 aa17.01■□□□□ 0.31
LTBR-213ENST00000544454 USP17L4A6NCW7 530 aa17.01■□□□□ 0.31
LTBR-213ENST00000544454 TOMM70O94826 608 aa17.01■□□□□ 0.31
LTBR-213ENST00000544454 LMOD1P29536 600 aaPredicted RBP17.01■□□□□ 0.31
LTBR-213ENST00000544454 SCNN1DP51172 638 aa17.01■□□□□ 0.31
LTBR-213ENST00000544454 CEP85Q6P2H3 762 aa17.01■□□□□ 0.31
LTBR-213ENST00000544454 USP17L1Q7RTZ2 530 aa17.01■□□□□ 0.31
LTBR-213ENST00000544454 ZNF804AQ7Z570 1209 aa17.01■□□□□ 0.31
LTBR-213ENST00000544454 DPF2Q92785 391 aa17.01■□□□□ 0.31
LTBR-213ENST00000544454 TAF1DQ9H5J8 278 aaPredicted RBP17.01■□□□□ 0.31
LTBR-213ENST00000544454 CD209Q9NNX6 404 aa17.01■□□□□ 0.31
LTBR-213ENST00000544454 IL1R1P14778 569 aa17■□□□□ 0.31
LTBR-213ENST00000544454 FGFR2P21802 821 aa17■□□□□ 0.31
LTBR-213ENST00000544454 RPS12P25398 132 aaKnown RBP17■□□□□ 0.31
LTBR-213ENST00000544454 GMPSP49915 693 aaPredicted RBP17■□□□□ 0.31
LTBR-213ENST00000544454 G3BP1Q13283 466 aaKnown RBP eCLIP17■□□□□ 0.31
LTBR-213ENST00000544454 RPAP2Q8IXW5 612 aaPredicted RBP17■□□□□ 0.31
LTBR-213ENST00000544454 LPIN2Q92539 896 aa17■□□□□ 0.31
LTBR-213ENST00000544454 FAM84BQ96KN1 310 aaPredicted RBP17■□□□□ 0.31
LTBR-213ENST00000544454 WDR90Q96KV7 1748 aa17■□□□□ 0.31
LTBR-213ENST00000544454 GPRC5DQ9NZD1 345 aa17■□□□□ 0.31
LTBR-213ENST00000544454 SPEF2Q9C093 1822 aa17■□□□□ 0.31
LTBR-213ENST00000544454 IFIT1P09914 478 aaKnown RBP16.99■□□□□ 0.31
LTBR-213ENST00000544454 HIBADHP31937 336 aaKnown RBP16.99■□□□□ 0.31
LTBR-213ENST00000544454 EPHX2P34913 555 aa16.99■□□□□ 0.31
LTBR-213ENST00000544454 STRIP1Q5VSL9 837 aa16.99■□□□□ 0.31
LTBR-213ENST00000544454 FBXO33Q7Z6M2 555 aa16.99■□□□□ 0.31
LTBR-213ENST00000544454 PNMA8AQ86V59 439 aaPredicted RBP16.99■□□□□ 0.31
LTBR-213ENST00000544454 RBM46Q8TBY0 533 aaKnown RBP16.99■□□□□ 0.31
LTBR-213ENST00000544454 ZBTB12Q9Y330 459 aaPredicted RBP16.99■□□□□ 0.31
LTBR-213ENST00000544454 EPS15P42566 896 aa16.98■□□□□ 0.31
LTBR-213ENST00000544454 GYG1P46976 350 aa16.98■□□□□ 0.31
LTBR-213ENST00000544454 CAVIN4Q5BKX8 364 aa16.98■□□□□ 0.31
LTBR-213ENST00000544454 TTLL5Q6EMB2 1281 aa16.98■□□□□ 0.31
LTBR-213ENST00000544454 RSBN1LQ6PCB5 846 aaPredicted RBP16.98■□□□□ 0.31
LTBR-213ENST00000544454 AGBL3Q8NEM8 1001 aa16.98■□□□□ 0.31
LTBR-213ENST00000544454 CNOT7Q9UIV1 285 aaKnown RBP16.98■□□□□ 0.31
LTBR-213ENST00000544454 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
LTBR-213ENST00000544454 SURF6O75683 361 aaKnown RBP16.97■□□□□ 0.31
LTBR-213ENST00000544454 SASH1O94885 1247 aa16.97■□□□□ 0.31
LTBR-213ENST00000544454 SLC5A1P13866 664 aa16.97■□□□□ 0.31
LTBR-213ENST00000544454 ATP2B3Q16720 1220 aa16.97■□□□□ 0.31
LTBR-213ENST00000544454 DACT2Q5SW24 774 aa16.97■□□□□ 0.31
LTBR-213ENST00000544454 VPS37DQ86XT2 251 aa16.97■□□□□ 0.31
LTBR-213ENST00000544454 TDRD7Q8NHU6 1098 aaKnown RBP16.97■□□□□ 0.31
LTBR-213ENST00000544454 ADARB2Q9NS39 739 aaKnown RBP16.97■□□□□ 0.31
LTBR-213ENST00000544454 AKAP2Q9Y2D5 859 aa16.97■□□□□ 0.31
LTBR-213ENST00000544454 H7C1D1 291 aa16.96■□□□□ 0.31
LTBR-213ENST00000544454 C1QTNF8P60827 252 aa16.96■□□□□ 0.31
LTBR-213ENST00000544454 GTF2IP78347 998 aa16.96■□□□□ 0.31
LTBR-213ENST00000544454 TFCP2Q12800 502 aa16.96■□□□□ 0.31
LTBR-213ENST00000544454 USP50Q70EL3 339 aaPredicted RBP16.96■□□□□ 0.31
LTBR-213ENST00000544454 GMLQ99445 158 aa16.96■□□□□ 0.31
LTBR-213ENST00000544454 HMMRO75330 724 aa16.95■□□□□ 0.3
LTBR-213ENST00000544454 MMP14P50281 582 aa16.95■□□□□ 0.3
LTBR-213ENST00000544454 FSTL1Q12841 308 aa16.95■□□□□ 0.3
LTBR-213ENST00000544454 ZNF609O15014 1411 aa16.95■□□□□ 0.3
LTBR-213ENST00000544454 MYO3BQ8WXR4 1341 aa16.95■□□□□ 0.3
LTBR-213ENST00000544454 BCAMP50895 628 aa16.94■□□□□ 0.3
LTBR-213ENST00000544454 OS9Q13438 667 aaPredicted RBP16.94■□□□□ 0.3
LTBR-213ENST00000544454 LDHDQ86WU2 507 aa16.94■□□□□ 0.3
LTBR-213ENST00000544454 SIRT2Q8IXJ6 389 aa16.94■□□□□ 0.3
LTBR-213ENST00000544454 MICALL2Q8IY33 904 aa16.94■□□□□ 0.3
LTBR-213ENST00000544454 SMC1BQ8NDV3 1235 aa16.94■□□□□ 0.3
LTBR-213ENST00000544454 FBXW7Q969H0 707 aa16.94■□□□□ 0.3
LTBR-213ENST00000544454 FAM205AQ6ZU69 1335 aa16.94■□□□□ 0.3
LTBR-213ENST00000544454 USP17L8P0C7I0 530 aa16.93■□□□□ 0.3
LTBR-213ENST00000544454 ZNF280AP59817 542 aaPredicted RBP16.93■□□□□ 0.3
LTBR-213ENST00000544454 TIMM10P62072 90 aa16.93■□□□□ 0.3
LTBR-213ENST00000544454 FKBP1AP62942 108 aaKnown RBP16.93■□□□□ 0.3
LTBR-213ENST00000544454 EAPPQ56P03 285 aaPredicted RBP16.93■□□□□ 0.3
LTBR-213ENST00000544454 HSP90AB4PQ58FF6 505 aa16.93■□□□□ 0.3
LTBR-213ENST00000544454 GPR108Q9NPR9 543 aa16.93■□□□□ 0.3
LTBR-213ENST00000544454 SCN4AP35499 1836 aa16.93■□□□□ 0.3
LTBR-213ENST00000544454 A0A1B0GUL7 405 aa16.92■□□□□ 0.3
LTBR-213ENST00000544454 ZBTB22O15209 634 aa16.92■□□□□ 0.3
LTBR-213ENST00000544454 FRAT2O75474 233 aaPredicted RBP16.92■□□□□ 0.3
LTBR-213ENST00000544454 CHADLQ6NUI6 762 aa16.92■□□□□ 0.3
LTBR-213ENST00000544454 ERC1Q8IUD2 1116 aa16.92■□□□□ 0.3
LTBR-213ENST00000544454 OGFOD1Q8N543 542 aa16.92■□□□□ 0.3
LTBR-213ENST00000544454 MXD3Q9BW11 206 aa16.92■□□□□ 0.3
LTBR-213ENST00000544454 GNL3LQ9NVN8 582 aaKnown RBP16.92■□□□□ 0.3
LTBR-213ENST00000544454 CLEC11AQ9Y240 323 aa16.92■□□□□ 0.3
LTBR-213ENST00000544454 SUPT16HQ9Y5B9 1047 aaKnown RBP16.92■□□□□ 0.3
LTBR-213ENST00000544454 POTEIP0CG38 1075 aa16.91■□□□□ 0.3
LTBR-213ENST00000544454 POTEJP0CG39 1038 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms