RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 UGGT1Q9NYU2 1555 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 TSPOAP1O95153 1857 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 EYA2O00167 538 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 BRD3Q15059 726 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 HSP90B2PQ58FF3 399 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 TEX11Q8IYF3 940 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 ERMNQ8TAM6 284 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 DNAJC5Q9H3Z4 198 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 BCS1LQ9Y276 419 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 TTC41PQ6P2S7 1318 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 APBB1IPQ7Z5R6 666 aaPredicted RBP7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 WDR75Q8IWA0 830 aaKnown RBP7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 G3BP2Q9UN86 482 aaKnown RBP7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 RNF113AO15541 343 aaKnown RBP7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 CETN1Q12798 172 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 PUM3Q15397 648 aaKnown RBP7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 CFAP100Q494V2 611 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 FKBP15Q5T1M5 1219 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 HEATR3Q7Z4Q2 680 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 NIM1KQ8IY84 436 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 CCDC24Q8N4L8 307 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 SAMD9Q5K651 1589 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 MYO5CQ9NQX4 1742 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 SDSP20132 328 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 FAM196AQ6ZSG2 479 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 ZNF397Q8NF99 534 aaPredicted RBP7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 PICK1Q9NRD5 415 aa7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 RBM8AQ9Y5S9 174 aaKnown RBP7.93□□□□□ -1.14
SRGAP1-206ENST00000543397 NUCB1Q02818 461 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 CNNM3Q8NE01 707 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 HOOK2Q96ED9 719 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 ZNF335Q9H4Z2 1342 aaPredicted RBP7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 PPFIA3O75145 1194 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 NAPAP54920 295 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 MSL1Q68DK7 614 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 MICAL1Q8TDZ2 1067 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 PYM1Q9BRP8 204 aaKnown RBP7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 FRMD4BQ9Y2L6 1034 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 SPDYE3A6NKU9 549 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 TBCAO75347 108 aaKnown RBP7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 ERLIN2O94905 339 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 CALM1P0DP23 149 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 CALM2P0DP24 149 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 CALM3P0DP25 149 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 CETN2P41208 172 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 WDR66Q8TBY9 1149 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 DRC1Q96MC2 740 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 METTL14Q9HCE5 456 aaKnown RBP7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 MLH3Q9UHC1 1453 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 STK10O94804 968 aaKnown RBP7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 SH3BGRP55822 239 aaPredicted RBP7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 CACNA2D4Q7Z3S7 1137 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 VPS36Q86VN1 386 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 SYCP3Q8IZU3 236 aa7.92□□□□□ -1.14
SRGAP1-206ENST00000543397 KIAA0232Q92628 1395 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 A0A1B0GUL7 405 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 GJB2P29033 226 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 CAMK4Q16566 473 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 CEP85Q6P2H3 762 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 FILIP1Q7Z7B0 1213 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 LRRC2Q9BYS8 371 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 LRRC27Q9C0I9 530 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 PNMA2Q9UL42 364 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 PPIP5K2O43314 1243 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 FAM43AQ8N2R8 423 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 MPNDQ8N594 471 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 C6orf50Q9HD87 102 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 ANO10Q9NW15 660 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 NLRP1Q9C000 1473 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 CHL1O00533 1208 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 PHKG2P15735 406 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 IGBP1P78318 339 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 TCERG1LQ5VWI1 586 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 NLGN1Q8N2Q7 840 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 ERCC4Q92889 916 aaPredicted RBP7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 EPB41L2O43491 1005 aaKnown RBP7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 BMP15O95972 392 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 RAB3GAP1Q15042 981 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 DPY19L2Q6NUT2 758 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 G2E3Q7L622 706 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 SKAP1Q86WV1 359 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 TCEANC2Q96MN5 208 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 KDM5DQ9BY66 1539 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 NPC1L1Q9UHC9 1359 aa7.91□□□□□ -1.14
SRGAP1-206ENST00000543397 METP08581 1390 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 PER1O15534 1290 aaPredicted RBP7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 TIMM10P62072 90 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 NMIQ13287 307 aaPredicted RBP7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 KRT27Q7Z3Y8 459 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 FSIP1Q8NA03 581 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 RRP36Q96EU6 259 aaKnown RBP7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 BICD1Q96G01 975 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 TMOD4Q9NZQ9 345 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 PCDHB15Q9Y5E8 787 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 RTL9Q8NET4 1388 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 H7C1D1 291 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 PRC1O43663 620 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 TRIM37O94972 964 aa7.9□□□□□ -1.14
SRGAP1-206ENST00000543397 MBD4O95243 580 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms