RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 FMN1Q68DA7 1419 aa12.89□□□□□ -0.35
MRPS35-204ENST00000542199 DNAJC25Q9H1X3 360 aa12.89□□□□□ -0.35
MRPS35-204ENST00000542199 MBIPQ9NS73 344 aa12.89□□□□□ -0.35
MRPS35-204ENST00000542199 KLF15Q9UIH9 416 aa12.89□□□□□ -0.35
MRPS35-204ENST00000542199 MAP3K6O95382 1288 aa12.88□□□□□ -0.35
MRPS35-204ENST00000542199 NEFLP07196 543 aa12.88□□□□□ -0.35
MRPS35-204ENST00000542199 CES1P23141 567 aa12.88□□□□□ -0.35
MRPS35-204ENST00000542199 IRS1P35568 1242 aa12.88□□□□□ -0.35
MRPS35-204ENST00000542199 COL13A1Q5TAT6 717 aaPredicted RBP12.88□□□□□ -0.35
MRPS35-204ENST00000542199 DHX32Q7L7V1 743 aaKnown RBP12.88□□□□□ -0.35
MRPS35-204ENST00000542199 SLC16A10Q8TF71 515 aa12.88□□□□□ -0.35
MRPS35-204ENST00000542199 TLR7Q9NYK1 1049 aaKnown RBP12.88□□□□□ -0.35
MRPS35-204ENST00000542199 RAPGEF3O95398 923 aa12.87□□□□□ -0.35
MRPS35-204ENST00000542199 PI16Q6UXB8 463 aa12.87□□□□□ -0.35
MRPS35-204ENST00000542199 NSUN5Q96P11 429 aaKnown RBP12.87□□□□□ -0.35
MRPS35-204ENST00000542199 DUSP9Q99956 384 aaKnown RBP12.87□□□□□ -0.35
MRPS35-204ENST00000542199 IGFLR1Q9H665 355 aa12.87□□□□□ -0.35
MRPS35-204ENST00000542199 CDK13Q14004 1512 aaKnown RBP12.87□□□□□ -0.35
MRPS35-204ENST00000542199 PRPF40AO75400 957 aaKnown RBP12.86□□□□□ -0.35
MRPS35-204ENST00000542199 PSAPP07602 524 aa12.86□□□□□ -0.35
MRPS35-204ENST00000542199 ATP2B2Q01814 1243 aa12.86□□□□□ -0.35
MRPS35-204ENST00000542199 MLLT1Q03111 559 aaPredicted RBP12.86□□□□□ -0.35
MRPS35-204ENST00000542199 TBC1D8BQ0IIM8 1120 aa12.86□□□□□ -0.35
MRPS35-204ENST00000542199 NEUROD1Q13562 356 aa12.86□□□□□ -0.35
MRPS35-204ENST00000542199 CCDC74AQ96AQ1 378 aa12.86□□□□□ -0.35
MRPS35-204ENST00000542199 EFCC1Q9HA90 598 aa12.86□□□□□ -0.35
MRPS35-204ENST00000542199 NPHS2Q9NP85 383 aa12.86□□□□□ -0.35
MRPS35-204ENST00000542199 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.86□□□□□ -0.354e-6■■□□□ 14.5
MRPS35-204ENST00000542199 ZBTB42B2RXF5 422 aa12.85□□□□□ -0.35
MRPS35-204ENST00000542199 ZNF326Q5BKZ1 582 aaKnown RBP12.85□□□□□ -0.35
MRPS35-204ENST00000542199 IRF7Q92985 503 aa12.85□□□□□ -0.35
MRPS35-204ENST00000542199 FAM161BQ96MY7 647 aa12.85□□□□□ -0.35
MRPS35-204ENST00000542199 PHF20L1A8MW92 1017 aa12.84□□□□□ -0.35
MRPS35-204ENST00000542199 NPM2Q86SE8 214 aaKnown RBP12.84□□□□□ -0.35
MRPS35-204ENST00000542199 EPS8L3Q8TE67 593 aaKnown RBP12.84□□□□□ -0.35
MRPS35-204ENST00000542199 CNTNAP3BQ96NU0 1288 aa12.84□□□□□ -0.35
MRPS35-204ENST00000542199 CNTNAP3Q9BZ76 1288 aa12.84□□□□□ -0.35
MRPS35-204ENST00000542199 LATS2Q9NRM7 1088 aa12.84□□□□□ -0.35
MRPS35-204ENST00000542199 FRMPD1Q5SYB0 1578 aa12.83□□□□□ -0.36
MRPS35-204ENST00000542199 TTC37Q6PGP7 1564 aa12.83□□□□□ -0.36
MRPS35-204ENST00000542199 AKNAQ7Z591 1439 aa12.83□□□□□ -0.36
MRPS35-204ENST00000542199 ACPPP15309 386 aa12.83□□□□□ -0.36
MRPS35-204ENST00000542199 SOX18P35713 384 aa12.83□□□□□ -0.36
MRPS35-204ENST00000542199 PLAURQ03405 335 aa12.83□□□□□ -0.36
MRPS35-204ENST00000542199 ALG1LQ6GMV1 187 aa12.83□□□□□ -0.36
MRPS35-204ENST00000542199 UBE2OQ9C0C9 1292 aaKnown RBP12.83□□□□□ -0.36
MRPS35-204ENST00000542199 DNAJB12Q9NXW2 375 aaKnown RBP12.83□□□□□ -0.36
MRPS35-204ENST00000542199 FANCAO15360 1455 aa12.83□□□□□ -0.36
MRPS35-204ENST00000542199 HECW1Q76N89 1606 aa12.82□□□□□ -0.36
MRPS35-204ENST00000542199 NEURL1BA8MQ27 555 aa12.82□□□□□ -0.36
MRPS35-204ENST00000542199 SIN3BO75182 1162 aa12.82□□□□□ -0.36
MRPS35-204ENST00000542199 ARAFP10398 606 aa12.82□□□□□ -0.36
MRPS35-204ENST00000542199 MAP2K3P46734 347 aa12.82□□□□□ -0.36
MRPS35-204ENST00000542199 FCHSD1Q86WN1 690 aa12.82□□□□□ -0.36
MRPS35-204ENST00000542199 GALNT12Q8IXK2 581 aa12.82□□□□□ -0.36
MRPS35-204ENST00000542199 PARP2Q9UGN5 583 aa12.82□□□□□ -0.36
MRPS35-204ENST00000542199 SALL4Q9UJQ4 1053 aa12.82□□□□□ -0.36
MRPS35-204ENST00000542199 DENND4BO75064 1496 aaPredicted RBP12.81□□□□□ -0.36
MRPS35-204ENST00000542199 HOXD8P13378 290 aaPredicted RBP12.81□□□□□ -0.36
MRPS35-204ENST00000542199 HFE2Q6ZVN8 426 aa12.81□□□□□ -0.36
MRPS35-204ENST00000542199 FBF1Q8TES7 1133 aa12.81□□□□□ -0.36
MRPS35-204ENST00000542199 PMEPA1Q969W9 287 aa12.81□□□□□ -0.36
MRPS35-204ENST00000542199 ZNF775Q96BV0 537 aaPredicted RBP12.81□□□□□ -0.36
MRPS35-204ENST00000542199 AVENQ9NQS1 362 aaPredicted RBP12.81□□□□□ -0.36
MRPS35-204ENST00000542199 GGA1Q9UJY5 639 aa12.81□□□□□ -0.36
MRPS35-204ENST00000542199 NSFL1CQ9UNZ2 370 aaKnown RBP12.81□□□□□ -0.36
MRPS35-204ENST00000542199 PLCH2O75038 1416 aa12.8□□□□□ -0.36
MRPS35-204ENST00000542199 J3QW42 95 aa12.8□□□□□ -0.36
MRPS35-204ENST00000542199 KIF4AO95239 1232 aa12.8□□□□□ -0.36
MRPS35-204ENST00000542199 ADH6P28332 368 aa12.8□□□□□ -0.36
MRPS35-204ENST00000542199 NRLP54845 237 aa12.8□□□□□ -0.36
MRPS35-204ENST00000542199 GPLD1P80108 840 aa12.8□□□□□ -0.36
MRPS35-204ENST00000542199 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.8□□□□□ -0.36
MRPS35-204ENST00000542199 TRPM4Q8TD43 1214 aa12.8□□□□□ -0.36
MRPS35-204ENST00000542199 KIAA1522Q9P206 1035 aaPredicted RBP12.8□□□□□ -0.36
MRPS35-204ENST00000542199 CDK11AQ9UQ88 783 aaPredicted RBP12.8□□□□□ -0.36
MRPS35-204ENST00000542199 GMPRP36959 345 aa12.79□□□□□ -0.36
MRPS35-204ENST00000542199 HYAL2Q12891 473 aa12.79□□□□□ -0.36
MRPS35-204ENST00000542199 PEAR1Q5VY43 1037 aaPredicted RBP12.79□□□□□ -0.36
MRPS35-204ENST00000542199 TNFRSF25Q93038 417 aa12.79□□□□□ -0.36
MRPS35-204ENST00000542199 MDFIQ99750 246 aa12.79□□□□□ -0.36
MRPS35-204ENST00000542199 CFAP74Q9C0B2 1584 aa12.78□□□□□ -0.36
MRPS35-204ENST00000542199 ADAMTS2O95450 1211 aa12.78□□□□□ -0.36
MRPS35-204ENST00000542199 SRSF11Q05519 484 aaKnown RBP12.78□□□□□ -0.36
MRPS35-204ENST00000542199 NCAPG2Q86XI2 1143 aa12.78□□□□□ -0.36
MRPS35-204ENST00000542199 MRRFQ96E11 262 aaKnown RBP12.78□□□□□ -0.36
MRPS35-204ENST00000542199 NAGPAQ9UK23 515 aa12.78□□□□□ -0.36
MRPS35-204ENST00000542199 SLC6A14Q9UN76 642 aa12.78□□□□□ -0.36
MRPS35-204ENST00000542199 TROQ12816 1431 aaPredicted RBP12.78□□□□□ -0.36
MRPS35-204ENST00000542199 TRPA1O75762 1119 aa12.77□□□□□ -0.37
MRPS35-204ENST00000542199 WFS1O76024 890 aa12.77□□□□□ -0.37
MRPS35-204ENST00000542199 ADH7P40394 386 aa12.77□□□□□ -0.37
MRPS35-204ENST00000542199 ACDQ96AP0 544 aa12.77□□□□□ -0.37
MRPS35-204ENST00000542199 OXCT2Q9BYC2 517 aaPredicted RBP12.77□□□□□ -0.37
MRPS35-204ENST00000542199 CASKIN1Q8WXD9 1431 aa12.77□□□□□ -0.37
MRPS35-204ENST00000542199 ARHGEF40Q8TER5 1519 aa12.77□□□□□ -0.37
MRPS35-204ENST00000542199 LOC102724428A0A0B4J2F2 783 aa12.76□□□□□ -0.37
MRPS35-204ENST00000542199 EDN3P14138 238 aa12.76□□□□□ -0.37
MRPS35-204ENST00000542199 SIK1P57059 783 aa12.76□□□□□ -0.37
MRPS35-204ENST00000542199 XPCQ01831 940 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms