RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 GRIN2AQ12879 1464 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 MAPK8IP3Q9UPT6 1336 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 MAPKBP1O60336 1514 aa5.17□□□□□ -1.58
SNHG1-219ENST00000542112 PCF11O94913 1555 aaKnown RBP5.16□□□□□ -1.58
SNHG1-219ENST00000542112 SHROOM2Q13796 1616 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 NUP160Q12769 1436 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 MYOM3Q5VTT5 1437 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 SYNJ2O15056 1496 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 MAGEA8P43361 318 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 NUCB2P80303 420 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 RELBQ01201 579 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 RAD51AP2Q09MP3 1159 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 TBCELQ5QJ74 424 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 CCDC30Q5VVM6 783 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 SPTY2D1Q68D10 685 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-219ENST00000542112 FMNL3Q8IVF7 1028 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 MEIOBQ8N635 442 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 LSM14AQ8ND56 463 aaKnown RBP5.16□□□□□ -1.58
SNHG1-219ENST00000542112 PIBF1Q8WXW3 757 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 MYO19Q96H55 970 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 AGBL1Q96MI9 1066 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 ZSCAN10Q96SZ4 725 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-219ENST00000542112 TSEN34Q9BSV6 310 aaKnown RBP5.16□□□□□ -1.58
SNHG1-219ENST00000542112 HIRIP3Q9BW71 556 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-219ENST00000542112 NIFKQ9BYG3 293 aaKnown RBP5.16□□□□□ -1.58
SNHG1-219ENST00000542112 SPTLC3Q9NUV7 552 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 FAM53CQ9NYF3 392 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 CABP1Q9NZU7 370 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 DCTN4Q9UJW0 460 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 MAP3K1Q13233 1512 aa5.16□□□□□ -1.58
SNHG1-219ENST00000542112 EIF3AQ14152 1382 aaKnown RBP5.16□□□□□ -1.58
SNHG1-219ENST00000542112 AKNAQ7Z591 1439 aa5.15□□□□□ -1.58
SNHG1-219ENST00000542112 KIAA0586Q9BVV6 1533 aa5.15□□□□□ -1.58
SNHG1-219ENST00000542112 EML1O00423 815 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 RGS20O76081 388 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 UPP2O95045 317 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 MAPK1P28482 360 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 NOS2P35228 1153 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 MAP2K2P36507 400 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 PEX19P40855 299 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 ARHGAP4P98171 946 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 TRAF1Q13077 416 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 MTMR3Q13615 1198 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 PDCD2Q16342 344 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-219ENST00000542112 ECM1Q16610 540 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 KLHL40Q2TBA0 621 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 GNASQ5JWF2 1037 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 MCTP2Q6DN12 878 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 ALKBH2Q6NS38 261 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 TMEM214Q6NUQ4 689 aaKnown RBP5.15□□□□□ -1.59
SNHG1-219ENST00000542112 ZSCAN29Q8IWY8 852 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-219ENST00000542112 ZNF513Q8N8E2 541 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-219ENST00000542112 ABTB2Q8N961 1025 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 FAM184AQ8NB25 1140 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 ANKRD20A12PQ8NF67 263 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 RHBDD1Q8TEB9 315 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 UBA5Q9GZZ9 404 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 FAM107BQ9H098 131 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 PRKRIP1Q9H875 184 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-219ENST00000542112 ZNF395Q9H8N7 513 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-219ENST00000542112 STIM2Q9P246 746 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 CTNNA3Q9UI47 895 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 ZNF232Q9UNY5 417 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 SMC3Q9UQE7 1217 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 USP3Q9Y6I4 520 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 DDX49Q9Y6V7 483 aaKnown RBP5.15□□□□□ -1.59
SNHG1-219ENST00000542112 TIAM1Q13009 1591 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 KDM2BQ8NHM5 1336 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 KIAA0556O60303 1618 aa5.15□□□□□ -1.59
SNHG1-219ENST00000542112 MIA2Q96PC5 1412 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 DISP1Q96F81 1524 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 RBM47A0AV96 593 aaKnown RBP5.14□□□□□ -1.59
SNHG1-219ENST00000542112 TMCO5BA8MYB1 307 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 IPO8O15397 1037 aaKnown RBP5.14□□□□□ -1.59
SNHG1-219ENST00000542112 SGSM2O43147 1006 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 IVLP07476 585 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 MAGEA9P43362 315 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 RNF144AP50876 292 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-219ENST00000542112 ICA1Q05084 483 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 FAM50AQ14320 339 aaKnown RBP5.14□□□□□ -1.59
SNHG1-219ENST00000542112 ZSCAN26Q16670 478 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 RTN1Q16799 776 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 TTC31Q49AM3 519 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-219ENST00000542112 COX20Q5RI15 118 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 C1orf53Q5VUE5 145 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 TTLL5Q6EMB2 1281 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 TRIM67Q6ZTA4 783 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 ZNF295-AS1Q8N0V1 137 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 IQUBQ8NA54 791 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 KLHL23Q8NBE8 558 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 PPM1EQ8WY54 764 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 HPS1Q92902 700 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 L3MBTL2Q969R5 705 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 SYAP1Q96A49 352 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-219ENST00000542112 UTP14AQ9BVJ6 771 aaKnown RBP5.14□□□□□ -1.59
SNHG1-219ENST00000542112 SAP130Q9H0E3 1048 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 QTRT2Q9H974 415 aaKnown RBP5.14□□□□□ -1.59
SNHG1-219ENST00000542112 MRS2Q9HD23 443 aa5.14□□□□□ -1.59
SNHG1-219ENST00000542112 A1CFQ9NQ94 594 aaKnown RBP5.14□□□□□ -1.59
SNHG1-219ENST00000542112 CGNL1Q0VF96 1302 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms