RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 TMX4Q9H1E5 349 aaPredicted RBP8.18□□□□□ -1.1
SNHG1-212ENST00000539975 HDAC5Q9UQL6 1122 aa8.18□□□□□ -1.1
SNHG1-212ENST00000539975 ATP5J2-PTCD1G3V325 749 aa8.17□□□□□ -1.1
SNHG1-212ENST00000539975 H0YIN7 160 aa8.17□□□□□ -1.1
SNHG1-212ENST00000539975 POLRMTO00411 1230 aaKnown RBP8.17□□□□□ -1.1
SNHG1-212ENST00000539975 SSTR3P32745 418 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-212ENST00000539975 RARSP54136 660 aaKnown RBP8.17□□□□□ -1.1
SNHG1-212ENST00000539975 BLOC1S3Q6QNY0 202 aa8.17□□□□□ -1.1
SNHG1-212ENST00000539975 ZNF34Q8IZ26 560 aa8.17□□□□□ -1.1
SNHG1-212ENST00000539975 CCDC191Q8NCU4 936 aa8.17□□□□□ -1.1
SNHG1-212ENST00000539975 NLRP3Q96P20 1036 aa8.17□□□□□ -1.1
SNHG1-212ENST00000539975 BRIP1Q9BX63 1249 aa8.17□□□□□ -1.1
SNHG1-212ENST00000539975 FHDC1Q9C0D6 1143 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-212ENST00000539975 CWC25Q9NXE8 425 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-212ENST00000539975 C9orf78Q9NZ63 289 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-212ENST00000539975 RNF123Q5XPI4 1314 aa8.17□□□□□ -1.1
SNHG1-212ENST00000539975 COL5A3P25940 1745 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-212ENST00000539975 VIRMAQ69YN4 1812 aaKnown RBP8.17□□□□□ -1.1
SNHG1-212ENST00000539975 COPS2P61201 443 aa8.16□□□□□ -1.1
SNHG1-212ENST00000539975 TRIM28Q13263 835 aaKnown RBP8.16□□□□□ -1.1
SNHG1-212ENST00000539975 G2E3Q7L622 706 aa8.16□□□□□ -1.1
SNHG1-212ENST00000539975 LRP10Q7Z4F1 713 aa8.16□□□□□ -1.1
SNHG1-212ENST00000539975 NLRP10Q86W26 655 aa8.16□□□□□ -1.1
SNHG1-212ENST00000539975 FTSJ3Q8IY81 847 aaKnown RBP8.16□□□□□ -1.1
SNHG1-212ENST00000539975 TAF1LQ8IZX4 1826 aa8.16□□□□□ -1.1
SNHG1-212ENST00000539975 LINS1Q8NG48 757 aa8.16□□□□□ -1.1
SNHG1-212ENST00000539975 SH3TC1Q8TE82 1336 aa8.16□□□□□ -1.1
SNHG1-212ENST00000539975 ARHGAP45Q92619 1136 aa8.16□□□□□ -1.1
SNHG1-212ENST00000539975 REPIN1Q9BWE0 567 aaKnown RBP8.16□□□□□ -1.1
SNHG1-212ENST00000539975 SRCIN1Q9C0H9 1055 aa8.16□□□□□ -1.1
SNHG1-212ENST00000539975 RCAN3Q9UKA8 241 aa8.16□□□□□ -1.1
SNHG1-212ENST00000539975 NOB1Q9ULX3 412 aaKnown RBP8.16□□□□□ -1.1
SNHG1-212ENST00000539975 ATP10DQ9P241 1426 aa8.15□□□□□ -1.1
SNHG1-212ENST00000539975 KDM4AO75164 1064 aa8.15□□□□□ -1.1
SNHG1-212ENST00000539975 RGS20O76081 388 aa8.15□□□□□ -1.1
SNHG1-212ENST00000539975 CCT4P50991 539 aaKnown RBP8.15□□□□□ -1.1
SNHG1-212ENST00000539975 BRPF1P55201 1214 aaPredicted RBP8.15□□□□□ -1.1
SNHG1-212ENST00000539975 DDR1Q08345 913 aa8.15□□□□□ -1.1
SNHG1-212ENST00000539975 PDE4DQ08499 809 aa8.15□□□□□ -1.1
SNHG1-212ENST00000539975 FUT2Q10981 343 aa8.15□□□□□ -1.1
SNHG1-212ENST00000539975 SUSD4Q5VX71 490 aa8.15□□□□□ -1.1
SNHG1-212ENST00000539975 ZKSCAN2Q63HK3 967 aa8.15□□□□□ -1.1
SNHG1-212ENST00000539975 PRR5LQ6MZQ0 368 aa8.15□□□□□ -1.1
SNHG1-212ENST00000539975 PARP9Q8IXQ6 854 aa8.15□□□□□ -1.1
SNHG1-212ENST00000539975 ZBTB38Q8NAP3 1195 aaPredicted RBP8.15□□□□□ -1.1
SNHG1-212ENST00000539975 RPGRQ92834 1020 aaKnown RBP8.15□□□□□ -1.1
SNHG1-212ENST00000539975 SYT17Q9BSW7 474 aa8.15□□□□□ -1.1
SNHG1-212ENST00000539975 LAMB4A4D0S4 1761 aa8.15□□□□□ -1.11
SNHG1-212ENST00000539975 F6X3S4 739 aa8.14□□□□□ -1.11
SNHG1-212ENST00000539975 BCAR3O75815 825 aa8.14□□□□□ -1.11
SNHG1-212ENST00000539975 ALDH1L1O75891 902 aa8.14□□□□□ -1.11
SNHG1-212ENST00000539975 ALDH1B1P30837 517 aa8.14□□□□□ -1.11
SNHG1-212ENST00000539975 GPR162Q16538 588 aa8.14□□□□□ -1.11
SNHG1-212ENST00000539975 ERFEQ4G0M1 354 aa8.14□□□□□ -1.11
SNHG1-212ENST00000539975 RTL5Q5HYW3 569 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-212ENST00000539975 MORN1Q5T089 497 aa8.14□□□□□ -1.11
SNHG1-212ENST00000539975 ATF7IPQ6VMQ6 1270 aa8.14□□□□□ -1.11
SNHG1-212ENST00000539975 NUTM1Q86Y26 1132 aa8.14□□□□□ -1.11
SNHG1-212ENST00000539975 C2CD5Q86YS7 1000 aa8.14□□□□□ -1.11
SNHG1-212ENST00000539975 ZNF516Q92618 1163 aa8.14□□□□□ -1.11
SNHG1-212ENST00000539975 ZNF622Q969S3 477 aaKnown RBP eCLIP8.14□□□□□ -1.11
SNHG1-212ENST00000539975 ISCA1Q9BUE6 129 aa8.14□□□□□ -1.11
SNHG1-212ENST00000539975 CHMP4BQ9H444 224 aaKnown RBP8.14□□□□□ -1.11
SNHG1-212ENST00000539975 PIM2Q9P1W9 311 aa8.14□□□□□ -1.11
SNHG1-212ENST00000539975 UBR3Q6ZT12 1888 aa8.13□□□□□ -1.11
SNHG1-212ENST00000539975 IBTKQ9P2D0 1353 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-212ENST00000539975 QSER1Q2KHR3 1735 aa8.13□□□□□ -1.11
SNHG1-212ENST00000539975 A0A0G2JLW4 131 aa8.13□□□□□ -1.11
SNHG1-212ENST00000539975 NEURL1BA8MQ27 555 aa8.13□□□□□ -1.11
SNHG1-212ENST00000539975 IRS4O14654 1257 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-212ENST00000539975 PCCAP05165 728 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-212ENST00000539975 GCKRQ14397 625 aa8.13□□□□□ -1.11
SNHG1-212ENST00000539975 DIXDC1Q155Q3 683 aa8.13□□□□□ -1.11
SNHG1-212ENST00000539975 CWF19L2Q2TBE0 894 aaKnown RBP8.13□□□□□ -1.11
SNHG1-212ENST00000539975 DDX46Q7L014 1031 aaKnown RBP8.13□□□□□ -1.11
SNHG1-212ENST00000539975 SCUBE3Q8IX30 993 aa8.13□□□□□ -1.11
SNHG1-212ENST00000539975 CNKSR1Q969H4 720 aa8.13□□□□□ -1.11
SNHG1-212ENST00000539975 FAM89AQ96GI7 184 aa8.13□□□□□ -1.11
SNHG1-212ENST00000539975 MASTLQ96GX5 879 aa8.13□□□□□ -1.11
SNHG1-212ENST00000539975 RBM17Q96I25 401 aaKnown RBP8.13□□□□□ -1.11
SNHG1-212ENST00000539975 UBN2Q6ZU65 1347 aa8.12□□□□□ -1.11
SNHG1-212ENST00000539975 GRIN3BO60391 1043 aa8.12□□□□□ -1.11
SNHG1-212ENST00000539975 PDE8AO60658 829 aa8.12□□□□□ -1.11
SNHG1-212ENST00000539975 NTSR2O95665 410 aa8.12□□□□□ -1.11
SNHG1-212ENST00000539975 NPR1P16066 1061 aa8.12□□□□□ -1.11
SNHG1-212ENST00000539975 GGCXP38435 758 aa8.12□□□□□ -1.11
SNHG1-212ENST00000539975 CCDC152Q4G0S7 254 aa8.12□□□□□ -1.11
SNHG1-212ENST00000539975 DALRD3Q5D0E6 543 aaKnown RBP8.12□□□□□ -1.11
SNHG1-212ENST00000539975 SLC10A5Q5PT55 438 aa8.12□□□□□ -1.11
SNHG1-212ENST00000539975 BEND3Q5T5X7 828 aa8.12□□□□□ -1.11
SNHG1-212ENST00000539975 UBE3BQ7Z3V4 1068 aa8.12□□□□□ -1.11
SNHG1-212ENST00000539975 DZIP1LQ8IYY4 767 aaKnown RBP8.12□□□□□ -1.11
SNHG1-212ENST00000539975 CCDC24Q8N4L8 307 aa8.12□□□□□ -1.11
SNHG1-212ENST00000539975 TTLL6Q8N841 843 aa8.12□□□□□ -1.11
SNHG1-212ENST00000539975 CASZ1Q86V15 1759 aa8.12□□□□□ -1.11
SNHG1-212ENST00000539975 ADCY9O60503 1353 aa8.11□□□□□ -1.11
SNHG1-212ENST00000539975 GRM8O00222 908 aa8.11□□□□□ -1.11
SNHG1-212ENST00000539975 IGKV5-2P06315 115 aa8.11□□□□□ -1.11
SNHG1-212ENST00000539975 GNAI3P08754 354 aa8.11□□□□□ -1.11
SNHG1-212ENST00000539975 UBTFL1P0CB47 393 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms