RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 ANKRD2Q9GZV1 360 aa13.04□□□□□ -0.32
LEMD3-202ENST00000539442 CCDC8Q9H0W5 538 aaPredicted RBP13.04□□□□□ -0.32
LEMD3-202ENST00000539442 BCL11AQ9H165 835 aa13.04□□□□□ -0.32
LEMD3-202ENST00000539442 COL4A1P02462 1669 aa13.04□□□□□ -0.32
LEMD3-202ENST00000539442 GLRX3O76003 335 aaKnown RBP13.03□□□□□ -0.32
LEMD3-202ENST00000539442 ALDH1B1P30837 517 aa13.03□□□□□ -0.32
LEMD3-202ENST00000539442 STYK1Q6J9G0 422 aa13.03□□□□□ -0.32
LEMD3-202ENST00000539442 LPIN2Q92539 896 aa13.03□□□□□ -0.32
LEMD3-202ENST00000539442 TLR7Q9NYK1 1049 aaKnown RBP13.03□□□□□ -0.32
LEMD3-202ENST00000539442 DBNLQ9UJU6 430 aaKnown RBP13.03□□□□□ -0.32
LEMD3-202ENST00000539442 MINPP1Q9UNW1 487 aa13.03□□□□□ -0.32
LEMD3-202ENST00000539442 H0YIN7 160 aa13.02□□□□□ -0.33
LEMD3-202ENST00000539442 SLC5A1P13866 664 aa13.02□□□□□ -0.33
LEMD3-202ENST00000539442 GSPT1P15170 499 aaKnown RBP13.02□□□□□ -0.33
LEMD3-202ENST00000539442 FGFR2P21802 821 aa13.02□□□□□ -0.33
LEMD3-202ENST00000539442 UBE4AQ14139 1066 aa13.02□□□□□ -0.33
LEMD3-202ENST00000539442 C2CD5Q86YS7 1000 aa13.02□□□□□ -0.33
LEMD3-202ENST00000539442 PI4K2BQ8TCG2 481 aa13.02□□□□□ -0.33
LEMD3-202ENST00000539442 NEUROD6Q96NK8 337 aa13.02□□□□□ -0.33
LEMD3-202ENST00000539442 DBNDD2Q9BQY9 259 aa13.02□□□□□ -0.33
LEMD3-202ENST00000539442 PSDA5PKW4 1024 aaPredicted RBP13.01□□□□□ -0.33
LEMD3-202ENST00000539442 IFIT1P09914 478 aaKnown RBP13.01□□□□□ -0.33
LEMD3-202ENST00000539442 ATP5JP18859 108 aa13.01□□□□□ -0.33
LEMD3-202ENST00000539442 TIMM10P62072 90 aa13.01□□□□□ -0.33
LEMD3-202ENST00000539442 XAGE2Q96GT9 111 aa13.01□□□□□ -0.33
LEMD3-202ENST00000539442 COL11A2P13942 1736 aaPredicted RBP13.01□□□□□ -0.33
LEMD3-202ENST00000539442 SPEF2Q9C093 1822 aa13.01□□□□□ -0.33
LEMD3-202ENST00000539442 XDHP47989 1333 aa13□□□□□ -0.33
LEMD3-202ENST00000539442 PPEF1O14829 653 aaPredicted RBP13□□□□□ -0.33
LEMD3-202ENST00000539442 CCDC158Q5M9N0 1113 aa13□□□□□ -0.33
LEMD3-202ENST00000539442 TSHZ3Q63HK5 1081 aa13□□□□□ -0.33
LEMD3-202ENST00000539442 HELBQ8NG08 1087 aaPredicted RBP13□□□□□ -0.33
LEMD3-202ENST00000539442 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13□□□□□ -0.33
LEMD3-202ENST00000539442 CNKSR1Q969H4 720 aa13□□□□□ -0.33
LEMD3-202ENST00000539442 MS4A3Q96HJ5 214 aa13□□□□□ -0.33
LEMD3-202ENST00000539442 SGIP1Q9BQI5 828 aa13□□□□□ -0.33
LEMD3-202ENST00000539442 ARAP2Q8WZ64 1704 aa12.99□□□□□ -0.33
LEMD3-202ENST00000539442 TAF5LO75529 589 aa12.99□□□□□ -0.33
LEMD3-202ENST00000539442 TGFB2P61812 414 aa12.99□□□□□ -0.33
LEMD3-202ENST00000539442 GORABQ5T7V8 394 aa12.99□□□□□ -0.33
LEMD3-202ENST00000539442 SP8Q8IXZ3 490 aa12.99□□□□□ -0.33
LEMD3-202ENST00000539442 ZNF512BQ96KM6 892 aaPredicted RBP12.99□□□□□ -0.33
LEMD3-202ENST00000539442 PODXL2Q9NZ53 605 aa12.99□□□□□ -0.33
LEMD3-202ENST00000539442 LEMD3Q9Y2U8 911 aa12.99□□□□□ -0.33
LEMD3-202ENST00000539442 ATP6V0A2Q9Y487 856 aa12.99□□□□□ -0.33
LEMD3-202ENST00000539442 KIF13BQ9NQT8 1826 aa12.99□□□□□ -0.33
LEMD3-202ENST00000539442 A0A1B0GUL6 1792 aa12.99□□□□□ -0.33
LEMD3-202ENST00000539442 LRRC37AA6NMS7 1700 aa12.99□□□□□ -0.33
LEMD3-202ENST00000539442 TAF1P21675 1872 aa12.98□□□□□ -0.33
LEMD3-202ENST00000539442 SDSP20132 328 aa12.98□□□□□ -0.33
LEMD3-202ENST00000539442 ADORA1P30542 326 aa12.98□□□□□ -0.33
LEMD3-202ENST00000539442 KCNJ4P48050 445 aa12.98□□□□□ -0.33
LEMD3-202ENST00000539442 TTC39AQ5SRH9 613 aa12.98□□□□□ -0.33
LEMD3-202ENST00000539442 CNTROBQ8N137 903 aa12.98□□□□□ -0.33
LEMD3-202ENST00000539442 ZNF622Q969S3 477 aaKnown RBP eCLIP12.98□□□□□ -0.33
LEMD3-202ENST00000539442 TMX4Q9H1E5 349 aaPredicted RBP12.98□□□□□ -0.33
LEMD3-202ENST00000539442 ZNF804BA4D1E1 1349 aa12.97□□□□□ -0.33
LEMD3-202ENST00000539442 UQCRFS1P1P0C7P4 283 aa12.97□□□□□ -0.33
LEMD3-202ENST00000539442 ATP2B4P23634 1241 aa12.97□□□□□ -0.33
LEMD3-202ENST00000539442 ARID4AP29374 1257 aaPredicted RBP12.97□□□□□ -0.33
LEMD3-202ENST00000539442 PTGER2P43116 358 aa12.97□□□□□ -0.33
LEMD3-202ENST00000539442 C8orf34Q49A92 452 aa12.97□□□□□ -0.33
LEMD3-202ENST00000539442 C15orf52Q6ZUT6 534 aaKnown RBP12.97□□□□□ -0.33
LEMD3-202ENST00000539442 HAUS7Q99871 368 aa12.97□□□□□ -0.33
LEMD3-202ENST00000539442 ANKIB1Q9P2G1 1089 aa12.97□□□□□ -0.33
LEMD3-202ENST00000539442 DLEC1Q9Y238 1755 aa12.97□□□□□ -0.33
LEMD3-202ENST00000539442 TRIM6-TRIM34B2RNG4 842 aa12.96□□□□□ -0.33
LEMD3-202ENST00000539442 CDC45O75419 566 aa12.96□□□□□ -0.33
LEMD3-202ENST00000539442 CHRNA5P30532 468 aa12.96□□□□□ -0.33
LEMD3-202ENST00000539442 CAVIN4Q5BKX8 364 aa12.96□□□□□ -0.33
LEMD3-202ENST00000539442 CCDC102BQ68D86 513 aa12.96□□□□□ -0.33
LEMD3-202ENST00000539442 CC2D2BQ6DHV5 1058 aa12.96□□□□□ -0.33
LEMD3-202ENST00000539442 PRPF40BQ6NWY9 871 aaKnown RBP12.96□□□□□ -0.33
LEMD3-202ENST00000539442 EVI5LQ96CN4 794 aa12.96□□□□□ -0.33
LEMD3-202ENST00000539442 BOLA2Q9H3K6 86 aa12.96□□□□□ -0.33
LEMD3-202ENST00000539442 SPON1Q9HCB6 807 aa12.96□□□□□ -0.33
LEMD3-202ENST00000539442 CD2APQ9Y5K6 639 aa12.96□□□□□ -0.33
LEMD3-202ENST00000539442 SNAP23O00161 211 aa12.95□□□□□ -0.34
LEMD3-202ENST00000539442 EIF5BO60841 1220 aaKnown RBP12.95□□□□□ -0.34
LEMD3-202ENST00000539442 GPSM2P81274 684 aa12.95□□□□□ -0.34
LEMD3-202ENST00000539442 CASC1Q6TDU7 716 aa12.95□□□□□ -0.34
LEMD3-202ENST00000539442 TICAM2Q86XR7 235 aa12.95□□□□□ -0.34
LEMD3-202ENST00000539442 RILPL2Q969X0 211 aa12.95□□□□□ -0.34
LEMD3-202ENST00000539442 BACH2Q9BYV9 841 aa12.95□□□□□ -0.34
LEMD3-202ENST00000539442 GNL3LQ9NVN8 582 aaKnown RBP12.95□□□□□ -0.34
LEMD3-202ENST00000539442 GGA1Q9UJY5 639 aa12.95□□□□□ -0.34
LEMD3-202ENST00000539442 NSFL1CQ9UNZ2 370 aaKnown RBP12.95□□□□□ -0.34
LEMD3-202ENST00000539442 RFX7Q2KHR2 1363 aa12.94□□□□□ -0.34
LEMD3-202ENST00000539442 IRS2Q9Y4H2 1338 aa12.94□□□□□ -0.34
LEMD3-202ENST00000539442 LTBP1Q14766 1721 aa12.94□□□□□ -0.34
LEMD3-202ENST00000539442 SEMA3EO15041 775 aa12.94□□□□□ -0.34
LEMD3-202ENST00000539442 UFL1O94874 794 aa12.94□□□□□ -0.34
LEMD3-202ENST00000539442 DPEP1P16444 411 aa12.94□□□□□ -0.34
LEMD3-202ENST00000539442 PHKA1P46020 1223 aa12.94□□□□□ -0.34
LEMD3-202ENST00000539442 GRIPAP1Q4V328 841 aa12.94□□□□□ -0.34
LEMD3-202ENST00000539442 TTLL6Q8N841 843 aa12.94□□□□□ -0.34
LEMD3-202ENST00000539442 HIP1O00291 1037 aa12.93□□□□□ -0.34
LEMD3-202ENST00000539442 KCNA3P22001 575 aa12.93□□□□□ -0.34
LEMD3-202ENST00000539442 FBXO33Q7Z6M2 555 aa12.93□□□□□ -0.34
LEMD3-202ENST00000539442 MPNDQ8N594 471 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 227.9 ms