RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 ZNF16P17020 682 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-216ENST00000534389 LORP23490 312 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-216ENST00000534389 INSM1Q01101 510 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-216ENST00000534389 DDX10Q13206 875 aaKnown RBP4.29□□□□□ -1.72
CSDE1-216ENST00000534389 FAM117BQ6P1L5 589 aa4.29□□□□□ -1.72
CSDE1-216ENST00000534389 GALNT12Q8IXK2 581 aa4.29□□□□□ -1.72
CSDE1-216ENST00000534389 ZSCAN1Q8NBB4 408 aa4.29□□□□□ -1.72
CSDE1-216ENST00000534389 TRPM4Q8TD43 1214 aa4.29□□□□□ -1.72
CSDE1-216ENST00000534389 WHAMMQ8TF30 809 aa4.29□□□□□ -1.72
CSDE1-216ENST00000534389 EDARADDQ8WWZ3 215 aa4.29□□□□□ -1.72
CSDE1-216ENST00000534389 ACDQ96AP0 544 aa4.29□□□□□ -1.72
CSDE1-216ENST00000534389 PLD4Q96BZ4 506 aa4.29□□□□□ -1.72
CSDE1-216ENST00000534389 FAM161BQ96MY7 647 aa4.29□□□□□ -1.72
CSDE1-216ENST00000534389 FRMD6Q96NE9 622 aa4.29□□□□□ -1.72
CSDE1-216ENST00000534389 IPO9Q96P70 1041 aaKnown RBP4.29□□□□□ -1.72
CSDE1-216ENST00000534389 LACRTQ9GZZ8 138 aa4.29□□□□□ -1.72
CSDE1-216ENST00000534389 SMG9Q9H0W8 520 aaKnown RBP4.29□□□□□ -1.72
CSDE1-216ENST00000534389 AKAP2Q9Y2D5 859 aa4.29□□□□□ -1.72
CSDE1-216ENST00000534389 ABCC9O60706 1549 aa4.29□□□□□ -1.72
CSDE1-216ENST00000534389 RBM47A0AV96 593 aaKnown RBP4.28□□□□□ -1.72
CSDE1-216ENST00000534389 CCER2I3L3R5 266 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 PDE2AO00408 941 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-216ENST00000534389 PIK3R2O00459 728 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 GIPC1O14908 333 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 LILRB5O75023 590 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 PTPRAP18433 802 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 LMNB1P20700 586 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 CDC25BP30305 580 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 GNA15P30679 374 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 IRS1P35568 1242 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 FCGRTP55899 365 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 TSNAXIP1Q2TAA8 658 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 ZNF385CQ66K41 422 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-216ENST00000534389 LYPD4Q6UWN0 246 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 SLCO4C1Q6ZQN7 724 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 PODNQ7Z5L7 613 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 TNFRSF25Q93038 417 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 MRRFQ96E11 262 aaKnown RBP4.28□□□□□ -1.72
CSDE1-216ENST00000534389 SETDB2Q96T68 719 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 RASSF4Q9H2L5 321 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 CHRDQ9H2X0 955 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 LATS2Q9NRM7 1088 aa4.28□□□□□ -1.72
CSDE1-216ENST00000534389 M0R082 166 aa4.27□□□□□ -1.73
CSDE1-216ENST00000534389 TRPA1O75762 1119 aa4.27□□□□□ -1.73
CSDE1-216ENST00000534389 CELA2BP08218 269 aaPredicted RBP4.27□□□□□ -1.73
CSDE1-216ENST00000534389 EPXP11678 715 aa4.27□□□□□ -1.73
CSDE1-216ENST00000534389 GSTT1P30711 240 aa4.27□□□□□ -1.73
CSDE1-216ENST00000534389 ATP11AP98196 1134 aa4.27□□□□□ -1.73
CSDE1-216ENST00000534389 KANK3Q6NY19 840 aa4.27□□□□□ -1.73
CSDE1-216ENST00000534389 NXPE4Q6UWF7 544 aa4.27□□□□□ -1.73
CSDE1-216ENST00000534389 PI16Q6UXB8 463 aa4.27□□□□□ -1.73
CSDE1-216ENST00000534389 FCHSD1Q86WN1 690 aa4.27□□□□□ -1.73
CSDE1-216ENST00000534389 ZNF417Q8TAU3 575 aa4.27□□□□□ -1.73
CSDE1-216ENST00000534389 DDX54Q8TDD1 881 aaKnown RBP4.27□□□□□ -1.73
CSDE1-216ENST00000534389 ZNF587Q96SQ5 575 aaPredicted RBP4.27□□□□□ -1.73
CSDE1-216ENST00000534389 ZKSCAN3Q9BRR0 538 aa4.27□□□□□ -1.73
CSDE1-216ENST00000534389 PBX4Q9BYU1 374 aa4.27□□□□□ -1.73
CSDE1-216ENST00000534389 BCO2Q9BYV7 579 aa4.27□□□□□ -1.73
CSDE1-216ENST00000534389 SALL4Q9UJQ4 1053 aa4.27□□□□□ -1.73
CSDE1-216ENST00000534389 TTF2Q9UNY4 1162 aaKnown RBP4.27□□□□□ -1.73
CSDE1-216ENST00000534389 A0A1W2PP55 124 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 ADARB2-AS1A8MUL3 147 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 OIP5O43482 229 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 ARL4DP49703 201 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 RBM10P98175 930 aaKnown RBP4.26□□□□□ -1.73
CSDE1-216ENST00000534389 TAGLNQ01995 201 aaKnown RBP4.26□□□□□ -1.73
CSDE1-216ENST00000534389 PERM1Q5SV97 790 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 TRAPPC3LQ5T215 181 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 COL13A1Q5TAT6 717 aaPredicted RBP4.26□□□□□ -1.73
CSDE1-216ENST00000534389 CHSY3Q70JA7 882 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 FBXO33Q7Z6M2 555 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 WFDC8Q8IUA0 241 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 IL22RA1Q8N6P7 574 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 TMEM87AQ8NBN3 555 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 ZNF428Q96B54 188 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 SRCIN1Q9C0H9 1055 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 SUV39H2Q9H5I1 410 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 C12orf49Q9H741 205 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 ZFYVE1Q9HBF4 777 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 FAM8A1Q9UBU6 413 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 GPN3Q9UHW5 284 aaPredicted RBP4.26□□□□□ -1.73
CSDE1-216ENST00000534389 KLF15Q9UIH9 416 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 LAS1LQ9Y4W2 734 aaKnown RBP4.26□□□□□ -1.73
CSDE1-216ENST00000534389 AK5Q9Y6K8 562 aa4.26□□□□□ -1.73
CSDE1-216ENST00000534389 SPDYE3A6NKU9 549 aa4.25□□□□□ -1.73
CSDE1-216ENST00000534389 ZBTB42B2RXF5 422 aa4.25□□□□□ -1.73
CSDE1-216ENST00000534389 KIF4AO95239 1232 aa4.25□□□□□ -1.73
CSDE1-216ENST00000534389 USP17L7P0C7H9 530 aa4.25□□□□□ -1.73
CSDE1-216ENST00000534389 ACPPP15309 386 aa4.25□□□□□ -1.73
CSDE1-216ENST00000534389 CDC27P30260 824 aa4.25□□□□□ -1.73
CSDE1-216ENST00000534389 GRM2Q14416 872 aa4.25□□□□□ -1.73
CSDE1-216ENST00000534389 C1orf229Q6ZS94 237 aaPredicted RBP4.25□□□□□ -1.73
CSDE1-216ENST00000534389 TMC4Q7Z404 712 aa4.25□□□□□ -1.73
CSDE1-216ENST00000534389 CEP120Q8N960 986 aa4.25□□□□□ -1.73
CSDE1-216ENST00000534389 SLC7A3Q8WY07 619 aa4.25□□□□□ -1.73
CSDE1-216ENST00000534389 RRAGDQ9NQL2 400 aaPredicted RBP4.25□□□□□ -1.73
CSDE1-216ENST00000534389 DZANK1Q9NVP4 752 aa4.25□□□□□ -1.73
CSDE1-216ENST00000534389 FRRS1LQ9P0K9 344 aa4.25□□□□□ -1.73
CSDE1-216ENST00000534389 NCAPD3P42695 1498 aa4.24□□□□□ -1.73
CSDE1-216ENST00000534389 EIF4G1Q04637 1599 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms