RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 INSM1Q01101 510 aaPredicted RBP10.81□□□□□ -0.68
POLB-216ENST00000530566 FOXJ1Q92949 421 aa10.81□□□□□ -0.68
POLB-216ENST00000530566 CDK15Q96Q40 435 aa10.81□□□□□ -0.68
POLB-216ENST00000530566 ADAMTS7Q9UKP4 1686 aa10.81□□□□□ -0.68
POLB-216ENST00000530566 MAP2P11137 1827 aaKnown RBP10.81□□□□□ -0.68
POLB-216ENST00000530566 CENPJQ9HC77 1338 aaPredicted RBP10.81□□□□□ -0.68
POLB-216ENST00000530566 PER1O15534 1290 aaPredicted RBP10.8□□□□□ -0.68
POLB-216ENST00000530566 TATP17735 454 aaPredicted RBP10.8□□□□□ -0.68
POLB-216ENST00000530566 WDR4P57081 412 aaKnown RBP10.8□□□□□ -0.68
POLB-216ENST00000530566 SCARF1Q14162 830 aa10.8□□□□□ -0.68
POLB-216ENST00000530566 ARID5BQ14865 1188 aa10.8□□□□□ -0.68
POLB-216ENST00000530566 CIAPIN1Q6FI81 312 aa10.8□□□□□ -0.68
POLB-216ENST00000530566 RPS6KA4O75676 772 aa10.79□□□□□ -0.68
POLB-216ENST00000530566 NR5A1Q13285 461 aa10.79□□□□□ -0.68
POLB-216ENST00000530566 NME9Q86XW9 330 aa10.79□□□□□ -0.68
POLB-216ENST00000530566 NPAS3Q8IXF0 933 aa10.79□□□□□ -0.68
POLB-216ENST00000530566 NXF1Q9UBU9 619 aaKnown RBP10.79□□□□□ -0.68
POLB-216ENST00000530566 ASAP1Q9ULH1 1129 aa10.79□□□□□ -0.68
POLB-216ENST00000530566 ITGB4P16144 1822 aa10.79□□□□□ -0.68
POLB-216ENST00000530566 DICER1Q9UPY3 1922 aaKnown RBP10.78□□□□□ -0.68
POLB-216ENST00000530566 SMG6Q86US8 1419 aaKnown RBP10.78□□□□□ -0.68
POLB-216ENST00000530566 H0YIN7 160 aa10.78□□□□□ -0.68
POLB-216ENST00000530566 POLRMTO00411 1230 aaKnown RBP10.78□□□□□ -0.68
POLB-216ENST00000530566 C2CD5Q86YS7 1000 aa10.78□□□□□ -0.68
POLB-216ENST00000530566 TAOK3Q9H2K8 898 aa10.78□□□□□ -0.68
POLB-216ENST00000530566 TMOD3Q9NYL9 352 aa10.78□□□□□ -0.68
POLB-216ENST00000530566 CD163L1Q9NR16 1453 aa10.78□□□□□ -0.68
POLB-216ENST00000530566 ADAMTSL1Q8N6G6 1762 aa10.77□□□□□ -0.68
POLB-216ENST00000530566 C21orf2O43822 256 aa10.77□□□□□ -0.69
POLB-216ENST00000530566 TIMP2P16035 220 aa10.77□□□□□ -0.69
POLB-216ENST00000530566 MRPL14Q6P1L8 145 aaKnown RBP10.77□□□□□ -0.69
POLB-216ENST00000530566 ZFP42Q96MM3 310 aa10.77□□□□□ -0.69
POLB-216ENST00000530566 SRP68Q9UHB9 627 aaKnown RBP10.77□□□□□ -0.69
POLB-216ENST00000530566 CYP27B1O15528 508 aa10.76□□□□□ -0.69
POLB-216ENST00000530566 FMR1Q06787 632 aaKnown RBP eCLIP10.76□□□□□ -0.69
POLB-216ENST00000530566 CST9Q5W186 159 aa10.76□□□□□ -0.69
POLB-216ENST00000530566 CTU1Q7Z7A3 348 aaKnown RBP10.76□□□□□ -0.69
POLB-216ENST00000530566 USHBP1Q8N6Y0 703 aa10.76□□□□□ -0.69
POLB-216ENST00000530566 POLR3EQ9NVU0 708 aa10.76□□□□□ -0.69
POLB-216ENST00000530566 EVC2Q86UK5 1308 aa10.76□□□□□ -0.69
POLB-216ENST00000530566 LTBP3Q9NS15 1303 aa10.76□□□□□ -0.69
POLB-216ENST00000530566 CUL9Q8IWT3 2517 aa10.76□□□□□ -0.69
POLB-216ENST00000530566 TM4SF1P30408 202 aa10.75□□□□□ -0.69
POLB-216ENST00000530566 AMPHP49418 695 aa10.75□□□□□ -0.69
POLB-216ENST00000530566 RTL5Q5HYW3 569 aaPredicted RBP10.75□□□□□ -0.69
POLB-216ENST00000530566 NBPF6Q5VWK0 638 aa10.75□□□□□ -0.69
POLB-216ENST00000530566 GPKOWQ92917 476 aaPredicted RBP eCLIP10.75□□□□□ -0.69
POLB-216ENST00000530566 NBPF4Q96M43 638 aa10.75□□□□□ -0.69
POLB-216ENST00000530566 CNTNAP4Q9C0A0 1308 aa10.75□□□□□ -0.69
POLB-216ENST00000530566 USP42Q9H9J4 1324 aaKnown RBP10.75□□□□□ -0.69
POLB-216ENST00000530566 RGPD2P0DJD1 1756 aa10.75□□□□□ -0.69
POLB-216ENST00000530566 HOXC9P31274 260 aa10.74□□□□□ -0.69
POLB-216ENST00000530566 SAPCD2Q86UD0 394 aa10.74□□□□□ -0.69
POLB-216ENST00000530566 STK17AQ9UEE5 414 aa10.74□□□□□ -0.69
POLB-216ENST00000530566 MAP3K19Q56UN5 1328 aa10.74□□□□□ -0.69
POLB-216ENST00000530566 RNF123Q5XPI4 1314 aa10.74□□□□□ -0.69
POLB-216ENST00000530566 DLEC1Q9Y238 1755 aa10.74□□□□□ -0.69
POLB-216ENST00000530566 ZIC2O95409 532 aaPredicted RBP10.73□□□□□ -0.69
POLB-216ENST00000530566 NOGQ13253 232 aa10.73□□□□□ -0.69
POLB-216ENST00000530566 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
POLB-216ENST00000530566 AKAP4Q5JQC9 854 aa10.73□□□□□ -0.69
POLB-216ENST00000530566 ZNF622Q969S3 477 aaKnown RBP eCLIP10.73□□□□□ -0.69
POLB-216ENST00000530566 HHIPL1Q96JK4 782 aa10.73□□□□□ -0.69
POLB-216ENST00000530566 KLF16Q9BXK1 252 aaPredicted RBP10.73□□□□□ -0.69
POLB-216ENST00000530566 ATG3Q9NT62 314 aa10.73□□□□□ -0.69
POLB-216ENST00000530566 TRAF5O00463 557 aa10.72□□□□□ -0.69
POLB-216ENST00000530566 UPP2O95045 317 aa10.72□□□□□ -0.69
POLB-216ENST00000530566 BICDL1Q6ZP65 573 aa10.72□□□□□ -0.69
POLB-216ENST00000530566 SH3RF1Q7Z6J0 888 aa10.72□□□□□ -0.69
POLB-216ENST00000530566 IRF7Q92985 503 aa10.72□□□□□ -0.69
POLB-216ENST00000530566 PURBQ96QR8 312 aaKnown RBP10.72□□□□□ -0.69
POLB-216ENST00000530566 SAGE1Q9NXZ1 904 aa10.72□□□□□ -0.69
POLB-216ENST00000530566 SZT2Q5T011 3432 aa10.72□□□□□ -0.69
POLB-216ENST00000530566 FER1L6Q2WGJ9 1857 aa10.72□□□□□ -0.69
POLB-216ENST00000530566 SKIV2LQ15477 1246 aaKnown RBP10.71□□□□□ -0.69
POLB-216ENST00000530566 PKN2Q16513 984 aaKnown RBP10.71□□□□□ -0.69
POLB-216ENST00000530566 PPARGC1BQ86YN6 1023 aaKnown RBP10.71□□□□□ -0.69
POLB-216ENST00000530566 DDRGK1Q96HY6 314 aa10.71□□□□□ -0.69
POLB-216ENST00000530566 C1QTNF2Q9BXJ5 285 aa10.71□□□□□ -0.69
POLB-216ENST00000530566 ZNF541Q9H0D2 1346 aa10.71□□□□□ -0.69
POLB-216ENST00000530566 MAP4K5Q9Y4K4 846 aa10.71□□□□□ -0.69
POLB-216ENST00000530566 MON2Q7Z3U7 1717 aa10.7□□□□□ -0.7
POLB-216ENST00000530566 KDRP35968 1356 aa10.7□□□□□ -0.7
POLB-216ENST00000530566 MAGEB6P1A0A0J9YX57 407 aa10.7□□□□□ -0.7
POLB-216ENST00000530566 GRM5P41594 1212 aa10.7□□□□□ -0.7
POLB-216ENST00000530566 VASH1Q7L8A9 365 aaPredicted RBP10.7□□□□□ -0.7
POLB-216ENST00000530566 TRMT44Q8IYL2 757 aaKnown RBP10.7□□□□□ -0.7
POLB-216ENST00000530566 SLC4A9Q96Q91 983 aa10.7□□□□□ -0.7
POLB-216ENST00000530566 TRPA1O75762 1119 aa10.69□□□□□ -0.7
POLB-216ENST00000530566 CELF2O95319 508 aaKnown RBP10.69□□□□□ -0.7
POLB-216ENST00000530566 SERPINB2P05120 415 aa10.69□□□□□ -0.7
POLB-216ENST00000530566 SOGA3Q5TF21 947 aa10.69□□□□□ -0.7
POLB-216ENST00000530566 SH3BP5LQ7L8J4 393 aa10.69□□□□□ -0.7
POLB-216ENST00000530566 ITPKCQ96DU7 683 aa10.69□□□□□ -0.7
POLB-216ENST00000530566 ZIC5Q96T25 663 aa10.69□□□□□ -0.7
POLB-216ENST00000530566 TRPM7Q96QT4 1865 aa10.68□□□□□ -0.7
POLB-216ENST00000530566 SBNO2Q9Y2G9 1366 aa10.68□□□□□ -0.7
POLB-216ENST00000530566 COL6A3P12111 3177 aa10.68□□□□□ -0.7
POLB-216ENST00000530566 NR3C2P08235 984 aa10.68□□□□□ -0.7
POLB-216ENST00000530566 LMOD1P29536 600 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms