RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 DICER1Q9UPY3 1922 aaKnown RBP9.7□□□□□ -0.86
SSBP3-211ENST00000528787 A0A1B0GUL7 405 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 LMNB1P20700 586 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 HIBADHP31937 336 aaKnown RBP9.7□□□□□ -0.86
SSBP3-211ENST00000528787 GPSM2P81274 684 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 KIAA2012Q0VF49 1180 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 TFCP2Q12800 502 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 LRRC24Q50LG9 513 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 TNNI3KQ59H18 835 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 AACSQ86V21 672 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 CHD1LQ86WJ1 897 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 NIM1KQ8IY84 436 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 VGLL2Q8N8G2 317 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 KLHDC4Q8TBB5 520 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 TBC1D22AQ8WUA7 517 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 ZNF512BQ96KM6 892 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-211ENST00000528787 NEUROD6Q96NK8 337 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 PA2G4Q9UQ80 394 aaKnown RBP9.7□□□□□ -0.86
SSBP3-211ENST00000528787 FPGT-TNNI3KV9GXZ4 949 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 PDS5AQ29RF7 1337 aaKnown RBP9.7□□□□□ -0.86
SSBP3-211ENST00000528787 MYO3BQ8WXR4 1341 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 DUOX1Q9NRD9 1551 aa9.7□□□□□ -0.86
SSBP3-211ENST00000528787 ZNF609O15014 1411 aa9.69□□□□□ -0.86
SSBP3-211ENST00000528787 PPIP5K2O43314 1243 aa9.69□□□□□ -0.86
SSBP3-211ENST00000528787 IARSP41252 1262 aaKnown RBP9.69□□□□□ -0.86
SSBP3-211ENST00000528787 NUCB1Q02818 461 aa9.69□□□□□ -0.86
SSBP3-211ENST00000528787 AOX1Q06278 1338 aa9.69□□□□□ -0.86
SSBP3-211ENST00000528787 LTBP1Q14766 1721 aa9.69□□□□□ -0.86
SSBP3-211ENST00000528787 TNIP1Q15025 636 aa9.69□□□□□ -0.86
SSBP3-211ENST00000528787 TTF1Q15361 905 aaPredicted RBP9.69□□□□□ -0.86
SSBP3-211ENST00000528787 TTC39AQ5SRH9 613 aa9.69□□□□□ -0.86
SSBP3-211ENST00000528787 SPTY2D1Q68D10 685 aaPredicted RBP9.69□□□□□ -0.86
SSBP3-211ENST00000528787 LARGE2Q8N3Y3 721 aa9.69□□□□□ -0.86
SSBP3-211ENST00000528787 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.69□□□□□ -0.86
SSBP3-211ENST00000528787 PUS3Q9BZE2 481 aaKnown RBP9.69□□□□□ -0.86
SSBP3-211ENST00000528787 DENND2AQ9ULE3 1009 aa9.69□□□□□ -0.86
SSBP3-211ENST00000528787 MAST3O60307 1309 aa9.68□□□□□ -0.86
SSBP3-211ENST00000528787 GLRX3O76003 335 aaKnown RBP9.68□□□□□ -0.86
SSBP3-211ENST00000528787 SASH1O94885 1247 aa9.68□□□□□ -0.86
SSBP3-211ENST00000528787 FGFR2P21802 821 aa9.68□□□□□ -0.86
SSBP3-211ENST00000528787 EIF6P56537 245 aaKnown RBP9.68□□□□□ -0.86
SSBP3-211ENST00000528787 DPY19L2Q6NUT2 758 aa9.68□□□□□ -0.86
SSBP3-211ENST00000528787 SLF2Q8IX21 1173 aa9.68□□□□□ -0.86
SSBP3-211ENST00000528787 WDR66Q8TBY9 1149 aa9.68□□□□□ -0.86
SSBP3-211ENST00000528787 ECHDC1Q9NTX5 307 aa9.68□□□□□ -0.86
SSBP3-211ENST00000528787 ZNF219Q9P2Y4 722 aaPredicted RBP9.68□□□□□ -0.86
SSBP3-211ENST00000528787 SUGT1Q9Y2Z0 365 aa9.68□□□□□ -0.86
SSBP3-211ENST00000528787 CCDC88AQ3V6T2 1871 aa9.68□□□□□ -0.86
SSBP3-211ENST00000528787 APBB1O00213 710 aa9.67□□□□□ -0.86
SSBP3-211ENST00000528787 TAF5LO75529 589 aa9.67□□□□□ -0.86
SSBP3-211ENST00000528787 FKBP1AP62942 108 aaKnown RBP9.67□□□□□ -0.86
SSBP3-211ENST00000528787 CERS3Q8IU89 383 aa9.67□□□□□ -0.86
SSBP3-211ENST00000528787 XAGE2Q96GT9 111 aa9.67□□□□□ -0.86
SSBP3-211ENST00000528787 POLLQ9UGP5 575 aa9.67□□□□□ -0.86
SSBP3-211ENST00000528787 ZNRF3Q9ULT6 936 aa9.67□□□□□ -0.86
SSBP3-211ENST00000528787 SBF1O95248 1867 aa9.66□□□□□ -0.86
SSBP3-211ENST00000528787 KDM2BQ8NHM5 1336 aa9.66□□□□□ -0.86
SSBP3-211ENST00000528787 IGHDP01880 384 aa9.66□□□□□ -0.86
SSBP3-211ENST00000528787 IL1R1P14778 569 aa9.66□□□□□ -0.86
SSBP3-211ENST00000528787 MX1P20591 662 aa9.66□□□□□ -0.86
SSBP3-211ENST00000528787 RPS12P25398 132 aaKnown RBP9.66□□□□□ -0.86
SSBP3-211ENST00000528787 ZSCAN25Q6NSZ9 544 aa9.66□□□□□ -0.86
SSBP3-211ENST00000528787 HELBQ8NG08 1087 aaPredicted RBP9.66□□□□□ -0.86
SSBP3-211ENST00000528787 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.66□□□□□ -0.864e-7■■■□□ 16.7
SSBP3-211ENST00000528787 IL1RAPL2Q9NP60 686 aa9.66□□□□□ -0.86
SSBP3-211ENST00000528787 SNED1Q8TER0 1413 aa9.65□□□□□ -0.86
SSBP3-211ENST00000528787 HIP1O00291 1037 aa9.65□□□□□ -0.86
SSBP3-211ENST00000528787 ATP5JP18859 108 aa9.65□□□□□ -0.86
SSBP3-211ENST00000528787 ARID4AP29374 1257 aaPredicted RBP9.65□□□□□ -0.86
SSBP3-211ENST00000528787 TIMM10P62072 90 aa9.65□□□□□ -0.86
SSBP3-211ENST00000528787 STRIP1Q5VSL9 837 aa9.65□□□□□ -0.86
SSBP3-211ENST00000528787 CCDC102BQ68D86 513 aa9.65□□□□□ -0.86
SSBP3-211ENST00000528787 B4GALNT3Q6L9W6 998 aa9.65□□□□□ -0.86
SSBP3-211ENST00000528787 CASC1Q6TDU7 716 aa9.65□□□□□ -0.86
SSBP3-211ENST00000528787 FBXO33Q7Z6M2 555 aa9.65□□□□□ -0.86
SSBP3-211ENST00000528787 OGFOD1Q8N543 542 aa9.65□□□□□ -0.86
SSBP3-211ENST00000528787 EAF2Q96CJ1 260 aaPredicted RBP9.65□□□□□ -0.86
SSBP3-211ENST00000528787 FAM84BQ96KN1 310 aaPredicted RBP9.65□□□□□ -0.86
SSBP3-211ENST00000528787 OSBPL3Q9H4L5 887 aa9.65□□□□□ -0.86
SSBP3-211ENST00000528787 CD209Q9NNX6 404 aa9.65□□□□□ -0.86
SSBP3-211ENST00000528787 HDAC9Q9UKV0 1011 aa9.65□□□□□ -0.86
SSBP3-211ENST00000528787 PSME4Q14997 1843 aa9.65□□□□□ -0.86
SSBP3-211ENST00000528787 SALL1Q9NSC2 1324 aa9.64□□□□□ -0.87
SSBP3-211ENST00000528787 USP17L3A6NCW0 530 aa9.64□□□□□ -0.87
SSBP3-211ENST00000528787 USP17L4A6NCW7 530 aa9.64□□□□□ -0.87
SSBP3-211ENST00000528787 RIMBP2O15034 1052 aa9.64□□□□□ -0.87
SSBP3-211ENST00000528787 ECE2O60344 883 aa9.64□□□□□ -0.87
SSBP3-211ENST00000528787 GSTO1P78417 241 aa9.64□□□□□ -0.87
SSBP3-211ENST00000528787 AOC3Q16853 763 aa9.64□□□□□ -0.87
SSBP3-211ENST00000528787 USP17L1Q7RTZ2 530 aa9.64□□□□□ -0.87
SSBP3-211ENST00000528787 CNTROBQ8N137 903 aa9.64□□□□□ -0.87
SSBP3-211ENST00000528787 SPATA5Q8NB90 893 aa9.64□□□□□ -0.87
SSBP3-211ENST00000528787 TDRD7Q8NHU6 1098 aaKnown RBP9.64□□□□□ -0.87
SSBP3-211ENST00000528787 LNPKQ9C0E8 428 aa9.64□□□□□ -0.87
SSBP3-211ENST00000528787 ZNF277Q9NRM2 450 aaPredicted RBP9.64□□□□□ -0.87
SSBP3-211ENST00000528787 RNF181Q9P0P0 153 aa9.64□□□□□ -0.87
SSBP3-211ENST00000528787 STAP2Q9UGK3 403 aa9.64□□□□□ -0.87
SSBP3-211ENST00000528787 GTF3C3Q9Y5Q9 886 aa9.64□□□□□ -0.87
SSBP3-211ENST00000528787 FAM205AQ6ZU69 1335 aa9.63□□□□□ -0.87
SSBP3-211ENST00000528787 AK9Q5TCS8 1911 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 643.6 ms