RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 KLRG1Q96E93 195 aa15.22■□□□□ 0.03
TRAPPC4-209ENST00000528230 CNNM1Q9NRU3 951 aa15.22■□□□□ 0.03
TRAPPC4-209ENST00000528230 TAF5LO75529 589 aa15.21■□□□□ 0.03
TRAPPC4-209ENST00000528230 HIRAP54198 1017 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC4-209ENST00000528230 INTS3Q68E01 1043 aaKnown RBP15.21■□□□□ 0.03
TRAPPC4-209ENST00000528230 RSBN1LQ6PCB5 846 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC4-209ENST00000528230 TXNRD3Q86VQ6 643 aa15.21■□□□□ 0.03
TRAPPC4-209ENST00000528230 TRPM7Q96QT4 1865 aa15.2■□□□□ 0.02
TRAPPC4-209ENST00000528230 STRIP1Q5VSL9 837 aa15.2■□□□□ 0.02
TRAPPC4-209ENST00000528230 HELBQ8NG08 1087 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC4-209ENST00000528230 GMLQ99445 158 aa15.2■□□□□ 0.02
TRAPPC4-209ENST00000528230 RIPOR2Q9Y4F9 1068 aa15.2■□□□□ 0.02
TRAPPC4-209ENST00000528230 POLR2AP24928 1970 aaKnown RBP15.2■□□□□ 0.02
TRAPPC4-209ENST00000528230 MROH5Q6ZUA9 1318 aa15.19■□□□□ 0.02
TRAPPC4-209ENST00000528230 IRS2Q9Y4H2 1338 aa15.19■□□□□ 0.02
TRAPPC4-209ENST00000528230 SHTN1A0MZ66 631 aa15.19■□□□□ 0.02
TRAPPC4-209ENST00000528230 TMEM88BA6NKF7 163 aa15.19■□□□□ 0.02
TRAPPC4-209ENST00000528230 UBTFL1P0CB47 393 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC4-209ENST00000528230 MMP14P50281 582 aa15.19■□□□□ 0.02
TRAPPC4-209ENST00000528230 ZNF280AP59817 542 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC4-209ENST00000528230 UBE4AQ14139 1066 aa15.19■□□□□ 0.02
TRAPPC4-209ENST00000528230 ATF7IPQ6VMQ6 1270 aa15.19■□□□□ 0.02
TRAPPC4-209ENST00000528230 SAMD7Q7Z3H4 446 aa15.19■□□□□ 0.02
TRAPPC4-209ENST00000528230 TRPM4Q8TD43 1214 aa15.19■□□□□ 0.02
TRAPPC4-209ENST00000528230 CD209Q9NNX6 404 aa15.19■□□□□ 0.02
TRAPPC4-209ENST00000528230 ZNF646O15015 1829 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC4-209ENST00000528230 MYO3BQ8WXR4 1341 aa15.18■□□□□ 0.02
TRAPPC4-209ENST00000528230 BCAR3O75815 825 aa15.18■□□□□ 0.02
TRAPPC4-209ENST00000528230 KLRK1P26718 216 aa15.18■□□□□ 0.02
TRAPPC4-209ENST00000528230 TTLL5Q6EMB2 1281 aa15.18■□□□□ 0.02
TRAPPC4-209ENST00000528230 JMYQ8N9B5 988 aa15.18■□□□□ 0.02
TRAPPC4-209ENST00000528230 PUS3Q9BZE2 481 aaKnown RBP15.18■□□□□ 0.02
TRAPPC4-209ENST00000528230 PLIN1O60240 522 aa15.17■□□□□ 0.02
TRAPPC4-209ENST00000528230 USP17L8P0C7I0 530 aa15.17■□□□□ 0.02
TRAPPC4-209ENST00000528230 DACT2Q5SW24 774 aa15.17■□□□□ 0.02
TRAPPC4-209ENST00000528230 CDC37L1Q7L3B6 337 aa15.17■□□□□ 0.02
TRAPPC4-209ENST00000528230 ZNF804AQ7Z570 1209 aa15.17■□□□□ 0.02
TRAPPC4-209ENST00000528230 SNAP23O00161 211 aa15.16■□□□□ 0.02
TRAPPC4-209ENST00000528230 GNAI3P08754 354 aa15.16■□□□□ 0.02
TRAPPC4-209ENST00000528230 TRIM27P14373 513 aa15.16■□□□□ 0.02
TRAPPC4-209ENST00000528230 IL1R1P14778 569 aa15.16■□□□□ 0.02
TRAPPC4-209ENST00000528230 RFX5P48382 616 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC4-209ENST00000528230 KIF4BQ2VIQ3 1234 aa15.16■□□□□ 0.02
TRAPPC4-209ENST00000528230 TBC1D10BQ4KMP7 808 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC4-209ENST00000528230 ZKSCAN2Q63HK3 967 aa15.16■□□□□ 0.02
TRAPPC4-209ENST00000528230 FRAT1Q92837 279 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC4-209ENST00000528230 FBXO3Q9UK99 471 aa15.16■□□□□ 0.02
TRAPPC4-209ENST00000528230 EGFRP00533 1210 aa15.15■□□□□ 0.02
TRAPPC4-209ENST00000528230 LRRC24Q50LG9 513 aa15.15■□□□□ 0.02
TRAPPC4-209ENST00000528230 RBM26Q5T8P6 1007 aaKnown RBP15.15■□□□□ 0.02
TRAPPC4-209ENST00000528230 CEP350Q5VT06 3117 aa15.15■□□□□ 0.02
TRAPPC4-209ENST00000528230 PDE8BO95263 885 aa15.14■□□□□ 0.01
TRAPPC4-209ENST00000528230 FKBP1AP62942 108 aaKnown RBP15.14■□□□□ 0.01
TRAPPC4-209ENST00000528230 GTF2IP78347 998 aa15.14■□□□□ 0.01
TRAPPC4-209ENST00000528230 PTPN12Q05209 780 aaKnown RBP15.14■□□□□ 0.01
TRAPPC4-209ENST00000528230 METTL24Q5JXM2 366 aa15.14■□□□□ 0.01
TRAPPC4-209ENST00000528230 OGFOD1Q8N543 542 aa15.14■□□□□ 0.01
TRAPPC4-209ENST00000528230 VGLL2Q8N8G2 317 aa15.14■□□□□ 0.01
TRAPPC4-209ENST00000528230 DCPSQ96C86 337 aaKnown RBP15.14■□□□□ 0.01
TRAPPC4-209ENST00000528230 MEIS3Q99687 375 aa15.14■□□□□ 0.01
TRAPPC4-209ENST00000528230 GLIS2Q9BZE0 524 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC4-209ENST00000528230 MYOZ2Q9NPC6 264 aa15.14■□□□□ 0.01
TRAPPC4-209ENST00000528230 LRRFIP2Q9Y608 721 aaKnown RBP15.14■□□□□ 0.01
TRAPPC4-209ENST00000528230 CNTNAP1P78357 1384 aa15.13■□□□□ 0.01
TRAPPC4-209ENST00000528230 EYA2O00167 538 aa15.13■□□□□ 0.01
TRAPPC4-209ENST00000528230 TRAF5O00463 557 aa15.13■□□□□ 0.01
TRAPPC4-209ENST00000528230 SASH1O94885 1247 aa15.13■□□□□ 0.01
TRAPPC4-209ENST00000528230 CST9Q5W186 159 aa15.13■□□□□ 0.01
TRAPPC4-209ENST00000528230 KLHDC4Q8TBB5 520 aa15.13■□□□□ 0.01
TRAPPC4-209ENST00000528230 FBXW7Q969H0 707 aa15.13■□□□□ 0.01
TRAPPC4-209ENST00000528230 RASSF10A6NK89 507 aa15.12■□□□□ 0.01
TRAPPC4-209ENST00000528230 CIAO1O76071 339 aa15.12■□□□□ 0.01
TRAPPC4-209ENST00000528230 HIBADHP31937 336 aaKnown RBP15.12■□□□□ 0.01
TRAPPC4-209ENST00000528230 FMR1Q06787 632 aaKnown RBP eCLIP15.12■□□□□ 0.01
TRAPPC4-209ENST00000528230 SCARF1Q14162 830 aa15.12■□□□□ 0.01
TRAPPC4-209ENST00000528230 DEFB115Q30KQ5 88 aa15.12■□□□□ 0.01
TRAPPC4-209ENST00000528230 USP48Q86UV5 1035 aa15.12■□□□□ 0.01
TRAPPC4-209ENST00000528230 TDRD7Q8NHU6 1098 aaKnown RBP15.12■□□□□ 0.01
TRAPPC4-209ENST00000528230 FAM84BQ96KN1 310 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC4-209ENST00000528230 MXD3Q9BW11 206 aa15.12■□□□□ 0.01
TRAPPC4-209ENST00000528230 HDAC9Q9UKV0 1011 aa15.12■□□□□ 0.01
TRAPPC4-209ENST00000528230 MTX1Q13505 466 aa15.11■□□□□ 0.01
TRAPPC4-209ENST00000528230 KRT26Q7Z3Y9 468 aa15.11■□□□□ 0.01
TRAPPC4-209ENST00000528230 FBXO33Q7Z6M2 555 aa15.11■□□□□ 0.01
TRAPPC4-209ENST00000528230 CLUAP1Q96AJ1 413 aa15.11■□□□□ 0.01
TRAPPC4-209ENST00000528230 COPRSQ9NQ92 184 aa15.11■□□□□ 0.01
TRAPPC4-209ENST00000528230 MKRN1Q9UHC7 482 aaKnown RBP15.11■□□□□ 0.01
TRAPPC4-209ENST00000528230 ABT1Q9ULW3 272 aaKnown RBP15.11■□□□□ 0.01
TRAPPC4-209ENST00000528230 FAM205AQ6ZU69 1335 aa15.11■□□□□ 0.01
TRAPPC4-209ENST00000528230 PITPNM2Q9BZ72 1349 aa15.11■□□□□ 0.01
TRAPPC4-209ENST00000528230 CELF2O95319 508 aaKnown RBP15.1■□□□□ 0.01
TRAPPC4-209ENST00000528230 FGFR2P21802 821 aa15.1■□□□□ 0.01
TRAPPC4-209ENST00000528230 GYG1P46976 350 aa15.1■□□□□ 0.01
TRAPPC4-209ENST00000528230 PUM3Q15397 648 aaKnown RBP15.1■□□□□ 0.01
TRAPPC4-209ENST00000528230 CAVIN4Q5BKX8 364 aa15.1■□□□□ 0.01
TRAPPC4-209ENST00000528230 ATG9AQ7Z3C6 839 aa15.1■□□□□ 0.01
TRAPPC4-209ENST00000528230 SULF1Q8IWU6 871 aa15.1■□□□□ 0.01
TRAPPC4-209ENST00000528230 TNNQ9UQP3 1299 aa15.1■□□□□ 0.01
TRAPPC4-209ENST00000528230 TLL2Q9Y6L7 1015 aa15.1■□□□□ 0.01
TRAPPC4-209ENST00000528230 GNAI2P04899 355 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms