RNA–Protein interactions for RNA: ENST00000526673.1

SOX6-207, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 534 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-207ENST00000526673 MCMDC2Q4G0Z9 681 aa11.34□□□□□ -0.59
SOX6-207ENST00000526673 TTC39AQ5SRH9 613 aa11.34□□□□□ -0.59
SOX6-207ENST00000526673 CCDC102BQ68D86 513 aa11.34□□□□□ -0.59
SOX6-207ENST00000526673 C15orf52Q6ZUT6 534 aaKnown RBP11.34□□□□□ -0.59
SOX6-207ENST00000526673 C3orf67Q6ZVT6 689 aa11.34□□□□□ -0.59
SOX6-207ENST00000526673 TMC4Q7Z404 712 aa11.34□□□□□ -0.59
SOX6-207ENST00000526673 FAM227BQ96M60 508 aa11.34□□□□□ -0.59
SOX6-207ENST00000526673 KIF13BQ9NQT8 1826 aa11.34□□□□□ -0.59
SOX6-207ENST00000526673 POLRMTO00411 1230 aaKnown RBP11.33□□□□□ -0.6
SOX6-207ENST00000526673 RNF113AO15541 343 aaKnown RBP11.33□□□□□ -0.6
SOX6-207ENST00000526673 ADORA1P30542 326 aa11.33□□□□□ -0.6
SOX6-207ENST00000526673 MCAMP43121 646 aa11.33□□□□□ -0.6
SOX6-207ENST00000526673 UBE3CQ15386 1083 aa11.33□□□□□ -0.6
SOX6-207ENST00000526673 PRR5LQ6MZQ0 368 aa11.33□□□□□ -0.6
SOX6-207ENST00000526673 ZSCAN25Q6NSZ9 544 aa11.33□□□□□ -0.6
SOX6-207ENST00000526673 NLGN1Q8N2Q7 840 aa11.33□□□□□ -0.6
SOX6-207ENST00000526673 CNBD1Q8NA66 436 aa11.33□□□□□ -0.6
SOX6-207ENST00000526673 TTC14Q96N46 770 aa11.33□□□□□ -0.6
SOX6-207ENST00000526673 ANKRD2Q9GZV1 360 aa11.33□□□□□ -0.6
SOX6-207ENST00000526673 PALD1Q9ULE6 856 aa11.33□□□□□ -0.6
SOX6-207ENST00000526673 SNX14Q9Y5W7 946 aa11.33□□□□□ -0.6
SOX6-207ENST00000526673 GOLIM4O00461 696 aa11.32□□□□□ -0.6
SOX6-207ENST00000526673 CD2BP2O95400 341 aaKnown RBP11.32□□□□□ -0.6
SOX6-207ENST00000526673 RPS8P62241 208 aaKnown RBP11.32□□□□□ -0.6
SOX6-207ENST00000526673 GRAPQ13588 217 aa11.32□□□□□ -0.6
SOX6-207ENST00000526673 CUL4AQ13619 759 aa11.32□□□□□ -0.6
SOX6-207ENST00000526673 SCARF1Q14162 830 aa11.32□□□□□ -0.6
SOX6-207ENST00000526673 ZNF827Q17R98 1081 aa11.32□□□□□ -0.6
SOX6-207ENST00000526673 RNF20Q5VTR2 975 aa11.32□□□□□ -0.6
SOX6-207ENST00000526673 POTEAQ6S8J7 498 aa11.32□□□□□ -0.6
SOX6-207ENST00000526673 DDX46Q7L014 1031 aaKnown RBP11.32□□□□□ -0.6
SOX6-207ENST00000526673 ZNF589Q86UQ0 364 aaPredicted RBP11.32□□□□□ -0.6
SOX6-207ENST00000526673 GRAPLQ8TC17 118 aaPredicted RBP11.32□□□□□ -0.6
SOX6-207ENST00000526673 APPBP2Q92624 585 aa11.32□□□□□ -0.6
SOX6-207ENST00000526673 INTS4Q96HW7 963 aaKnown RBP11.32□□□□□ -0.6
SOX6-207ENST00000526673 CCDC85AQ96PX6 553 aaPredicted RBP11.32□□□□□ -0.6
SOX6-207ENST00000526673 DNAJC2Q99543 621 aaKnown RBP11.32□□□□□ -0.6
SOX6-207ENST00000526673 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.32□□□□□ -0.6
SOX6-207ENST00000526673 MINPP1Q9UNW1 487 aa11.32□□□□□ -0.6
SOX6-207ENST00000526673 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
SOX6-207ENST00000526673 CHD4Q14839 1912 aa11.31□□□□□ -0.6
SOX6-207ENST00000526673 ST5P78524 1137 aa11.31□□□□□ -0.6
SOX6-207ENST00000526673 PTH1RQ03431 593 aa11.31□□□□□ -0.6
SOX6-207ENST00000526673 KRT32Q14532 448 aa11.31□□□□□ -0.6
SOX6-207ENST00000526673 GORABQ5T7V8 394 aa11.31□□□□□ -0.6
SOX6-207ENST00000526673 FBXL16Q8N461 479 aa11.31□□□□□ -0.6
SOX6-207ENST00000526673 CELF1Q92879 486 aaKnown RBP11.31□□□□□ -0.6
SOX6-207ENST00000526673 EDC3Q96F86 508 aaKnown RBP11.31□□□□□ -0.6
SOX6-207ENST00000526673 CRAMP1Q96RY5 1269 aa11.31□□□□□ -0.6
SOX6-207ENST00000526673 ZSWIM6Q9HCJ5 1215 aa11.31□□□□□ -0.6
SOX6-207ENST00000526673 RBM8AQ9Y5S9 174 aaKnown RBP11.31□□□□□ -0.6
SOX6-207ENST00000526673 MAST3O60307 1309 aa11.31□□□□□ -0.6
SOX6-207ENST00000526673 COL1A1P02452 1464 aaPredicted RBP11.31□□□□□ -0.6
SOX6-207ENST00000526673 TCRBV5S4A2TA0A5A2 114 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 APBA3O96018 575 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 SERPINB2P05120 415 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 CYP2E1P05181 493 aaPredicted RBP11.3□□□□□ -0.6
SOX6-207ENST00000526673 ZKSCAN1P17029 563 aaPredicted RBP11.3□□□□□ -0.6
SOX6-207ENST00000526673 GTF2E1P29083 439 aaPredicted RBP11.3□□□□□ -0.6
SOX6-207ENST00000526673 ADD2P35612 726 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 ZAP70P43403 619 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 PHKA1P46020 1223 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 DDR1Q08345 913 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 VPS53Q5VIR6 699 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 CREB3L3Q68CJ9 461 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 ERICH6Q7L0X2 663 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 FBXO33Q7Z6M2 555 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 SPATA5Q8NB90 893 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 CAMKK2Q96RR4 588 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 PODXL2Q9NZ53 605 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 LEMD3Q9Y2U8 911 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 PNPLA7Q6ZV29 1317 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 SALL1Q9NSC2 1324 aa11.3□□□□□ -0.6
SOX6-207ENST00000526673 ZNF646O15015 1829 aaPredicted RBP11.3□□□□□ -0.6
SOX6-207ENST00000526673 LAMB1P07942 1786 aa11.29□□□□□ -0.6
SOX6-207ENST00000526673 SLC27A2O14975 620 aa11.29□□□□□ -0.6
SOX6-207ENST00000526673 PHF14O94880 888 aa11.29□□□□□ -0.6
SOX6-207ENST00000526673 PSMA5P28066 241 aa11.29□□□□□ -0.6
SOX6-207ENST00000526673 RASGRF1Q13972 1273 aa11.29□□□□□ -0.6
SOX6-207ENST00000526673 CLEC17AQ6ZS10 378 aa11.29□□□□□ -0.6
SOX6-207ENST00000526673 RASEFQ8IZ41 740 aa11.29□□□□□ -0.6
SOX6-207ENST00000526673 BCL11AQ9H165 835 aa11.29□□□□□ -0.6
SOX6-207ENST00000526673 CWC22Q9HCG8 908 aaKnown RBP11.29□□□□□ -0.6
SOX6-207ENST00000526673 CHMP5Q9NZZ3 219 aa11.29□□□□□ -0.6
SOX6-207ENST00000526673 FAM177BA6PVY3 158 aa11.28□□□□□ -0.6
SOX6-207ENST00000526673 BBOX1O75936 387 aa11.28□□□□□ -0.6
SOX6-207ENST00000526673 BICDL1Q6ZP65 573 aa11.28□□□□□ -0.6
SOX6-207ENST00000526673 SMIM5Q71RC9 77 aa11.28□□□□□ -0.6
SOX6-207ENST00000526673 COL23A1Q86Y22 540 aaPredicted RBP11.28□□□□□ -0.6
SOX6-207ENST00000526673 BRIP1Q9BX63 1249 aa11.28□□□□□ -0.6
SOX6-207ENST00000526673 AGXT2Q9BYV1 514 aa11.28□□□□□ -0.6
SOX6-207ENST00000526673 GNL3LQ9NVN8 582 aaKnown RBP11.28□□□□□ -0.6
SOX6-207ENST00000526673 XDHP47989 1333 aa11.28□□□□□ -0.6
SOX6-207ENST00000526673 DDX60LQ5H9U9 1706 aaKnown RBP11.27□□□□□ -0.61
SOX6-207ENST00000526673 FOXP2O15409 715 aa11.27□□□□□ -0.61
SOX6-207ENST00000526673 HMGB1P09429 215 aaKnown RBP11.27□□□□□ -0.61
SOX6-207ENST00000526673 HSPD1P10809 573 aaKnown RBP11.27□□□□□ -0.61
SOX6-207ENST00000526673 SLC4A3P48751 1232 aa11.27□□□□□ -0.61
SOX6-207ENST00000526673 NEK4P51957 841 aa11.27□□□□□ -0.61
SOX6-207ENST00000526673 ALX1Q15699 326 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms