RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 TAF5LO75529 589 aa23.42■■□□□ 1.34
CAPN1-203ENST00000525013 CELF2O95319 508 aaKnown RBP23.42■■□□□ 1.34
CAPN1-203ENST00000525013 NBPF7P0C2Y1 421 aaPredicted RBP23.42■■□□□ 1.34
CAPN1-203ENST00000525013 KIF4BQ2VIQ3 1234 aa23.42■■□□□ 1.34
CAPN1-203ENST00000525013 ALDH1L2Q3SY69 923 aa23.42■■□□□ 1.34
CAPN1-203ENST00000525013 USP48Q86UV5 1035 aa23.42■■□□□ 1.34
CAPN1-203ENST00000525013 SUCLG2Q96I99 432 aa23.42■■□□□ 1.34
CAPN1-203ENST00000525013 COA1Q9GZY4 146 aa23.42■■□□□ 1.34
CAPN1-203ENST00000525013 KLRK1P26718 216 aa23.41■■□□□ 1.34
CAPN1-203ENST00000525013 LDHAL6AQ6ZMR3 332 aa23.41■■□□□ 1.34
CAPN1-203ENST00000525013 PAXIP1Q6ZW49 1069 aaPredicted RBP23.41■■□□□ 1.34
CAPN1-203ENST00000525013 ZNF408Q9H9D4 720 aa23.41■■□□□ 1.34
CAPN1-203ENST00000525013 CNNM1Q9NRU3 951 aa23.41■■□□□ 1.34
CAPN1-203ENST00000525013 USP17L8P0C7I0 530 aa23.4■■□□□ 1.34
CAPN1-203ENST00000525013 DIEXFQ68CQ4 756 aaKnown RBP23.4■■□□□ 1.34
CAPN1-203ENST00000525013 DCPSQ96C86 337 aaKnown RBP23.4■■□□□ 1.34
CAPN1-203ENST00000525013 SNAP23O00161 211 aa23.39■■□□□ 1.33
CAPN1-203ENST00000525013 PLIN1O60240 522 aa23.39■■□□□ 1.33
CAPN1-203ENST00000525013 KRT26Q7Z3Y9 468 aa23.39■■□□□ 1.33
CAPN1-203ENST00000525013 GMLQ99445 158 aa23.39■■□□□ 1.33
CAPN1-203ENST00000525013 A0A1B0GUL6 1792 aa23.39■■□□□ 1.33
CAPN1-203ENST00000525013 UTYO14607 1347 aa23.38■■□□□ 1.33
CAPN1-203ENST00000525013 CT47B1P0C2W7 299 aaPredicted RBP23.38■■□□□ 1.33
CAPN1-203ENST00000525013 ZNF280AP59817 542 aaPredicted RBP23.38■■□□□ 1.33
CAPN1-203ENST00000525013 GRM1Q13255 1194 aa23.38■■□□□ 1.33
CAPN1-203ENST00000525013 MIER1Q8N108 512 aa23.38■■□□□ 1.33
CAPN1-203ENST00000525013 KAZALD1Q96I82 304 aa23.38■■□□□ 1.33
CAPN1-203ENST00000525013 MXD3Q9BW11 206 aa23.38■■□□□ 1.33
CAPN1-203ENST00000525013 ZNF609O15014 1411 aa23.37■■□□□ 1.33
CAPN1-203ENST00000525013 DACT2Q5SW24 774 aa23.37■■□□□ 1.33
CAPN1-203ENST00000525013 DLK2Q6UY11 383 aa23.37■■□□□ 1.33
CAPN1-203ENST00000525013 BICC1Q9H694 974 aaKnown RBP23.37■■□□□ 1.33
CAPN1-203ENST00000525013 TLL2Q9Y6L7 1015 aa23.37■■□□□ 1.33
CAPN1-203ENST00000525013 WDR33Q9C0J8 1336 aaKnown RBP23.36■■□□□ 1.33
CAPN1-203ENST00000525013 STRIP1Q5VSL9 837 aa23.36■■□□□ 1.33
CAPN1-203ENST00000525013 TTLL5Q6EMB2 1281 aa23.36■■□□□ 1.33
CAPN1-203ENST00000525013 MYOZ2Q9NPC6 264 aa23.36■■□□□ 1.33
CAPN1-203ENST00000525013 GGA3Q9NZ52 723 aa23.36■■□□□ 1.33
CAPN1-203ENST00000525013 SCARF1Q14162 830 aa23.35■■□□□ 1.33
CAPN1-203ENST00000525013 SULF1Q8IWU6 871 aa23.35■■□□□ 1.33
CAPN1-203ENST00000525013 OGFOD1Q8N543 542 aa23.35■■□□□ 1.33
CAPN1-203ENST00000525013 CAPNS2Q96L46 248 aa23.35■■□□□ 1.33
CAPN1-203ENST00000525013 ASTN2O75129 1339 aaPredicted RBP23.34■■□□□ 1.33
CAPN1-203ENST00000525013 ADM5C9JUS6 153 aa23.34■■□□□ 1.33
CAPN1-203ENST00000525013 ECE1P42892 770 aa23.34■■□□□ 1.33
CAPN1-203ENST00000525013 GTF2IP78347 998 aa23.34■■□□□ 1.33
CAPN1-203ENST00000525013 CYP4F22Q6NT55 531 aa23.34■■□□□ 1.33
CAPN1-203ENST00000525013 USP44Q9H0E7 712 aa23.34■■□□□ 1.33
CAPN1-203ENST00000525013 CD209Q9NNX6 404 aa23.34■■□□□ 1.33
CAPN1-203ENST00000525013 NOB1Q9ULX3 412 aaKnown RBP23.34■■□□□ 1.33
CAPN1-203ENST00000525013 MYO3BQ8WXR4 1341 aa23.33■■□□□ 1.33
CAPN1-203ENST00000525013 ZNF646O15015 1829 aaPredicted RBP23.33■■□□□ 1.33
CAPN1-203ENST00000525013 ANGEL2Q5VTE6 544 aaKnown RBP23.33■■□□□ 1.33
CAPN1-203ENST00000525013 ZNF804AQ7Z570 1209 aa23.33■■□□□ 1.33
CAPN1-203ENST00000525013 SAPCD2Q86UD0 394 aa23.33■■□□□ 1.33
CAPN1-203ENST00000525013 AIDAQ96BJ3 306 aa23.33■■□□□ 1.33
CAPN1-203ENST00000525013 PUS3Q9BZE2 481 aaKnown RBP23.33■■□□□ 1.33
CAPN1-203ENST00000525013 RABL6Q3YEC7 729 aaPredicted RBP23.32■■□□□ 1.32
CAPN1-203ENST00000525013 COL13A1Q5TAT6 717 aaPredicted RBP23.32■■□□□ 1.32
CAPN1-203ENST00000525013 C15orf52Q6ZUT6 534 aaKnown RBP23.32■■□□□ 1.32
CAPN1-203ENST00000525013 ANKRD44Q8N8A2 993 aa23.32■■□□□ 1.32
CAPN1-203ENST00000525013 IRS2Q9Y4H2 1338 aa23.31■■□□□ 1.32
CAPN1-203ENST00000525013 IFFO2Q5TF58 517 aa23.3■■□□□ 1.32
CAPN1-203ENST00000525013 KIAA0825Q8IV33 1275 aa23.3■■□□□ 1.32
CAPN1-203ENST00000525013 API5Q9BZZ5 524 aaKnown RBP23.3■■□□□ 1.32
CAPN1-203ENST00000525013 FOXN1O15353 648 aa23.29■■□□□ 1.32
CAPN1-203ENST00000525013 RARSP54136 660 aaKnown RBP23.29■■□□□ 1.32
CAPN1-203ENST00000525013 HDAC9Q9UKV0 1011 aa23.29■■□□□ 1.32
CAPN1-203ENST00000525013 RIPOR2Q9Y4F9 1068 aa23.29■■□□□ 1.32
CAPN1-203ENST00000525013 BRPF1P55201 1214 aaPredicted RBP23.28■■□□□ 1.32
CAPN1-203ENST00000525013 HUNKP57058 714 aa23.28■■□□□ 1.32
CAPN1-203ENST00000525013 UBE4AQ14139 1066 aa23.28■■□□□ 1.32
CAPN1-203ENST00000525013 NBPF9Q3BBW0 867 aa23.28■■□□□ 1.32
CAPN1-203ENST00000525013 C2orf69Q8N8R5 385 aa23.28■■□□□ 1.32
CAPN1-203ENST00000525013 GBA2Q9HCG7 927 aaPredicted RBP23.28■■□□□ 1.32
CAPN1-203ENST00000525013 WBP1LQ9NX94 342 aa23.28■■□□□ 1.32
CAPN1-203ENST00000525013 MROH5Q6ZUA9 1318 aa23.28■■□□□ 1.32
CAPN1-203ENST00000525013 IL1R1P14778 569 aa23.27■■□□□ 1.32
CAPN1-203ENST00000525013 HNRNPUQ00839 825 aaKnown RBP eCLIP23.27■■□□□ 1.32
CAPN1-203ENST00000525013 MAP2K1Q02750 393 aaPredicted RBP23.27■■□□□ 1.32
CAPN1-203ENST00000525013 METTL24Q5JXM2 366 aa23.27■■□□□ 1.32
CAPN1-203ENST00000525013 KLHDC4Q8TBB5 520 aa23.27■■□□□ 1.32
CAPN1-203ENST00000525013 HHIPL1Q96JK4 782 aa23.27■■□□□ 1.32
CAPN1-203ENST00000525013 AOC2O75106 756 aa23.26■■□□□ 1.31
CAPN1-203ENST00000525013 UBTFL1P0CB47 393 aaPredicted RBP23.26■■□□□ 1.31
CAPN1-203ENST00000525013 MMP14P50281 582 aa23.26■■□□□ 1.31
CAPN1-203ENST00000525013 LRRC24Q50LG9 513 aa23.26■■□□□ 1.31
CAPN1-203ENST00000525013 CDCA5Q96FF9 252 aa23.26■■□□□ 1.31
CAPN1-203ENST00000525013 SCAF8Q9UPN6 1271 aaKnown RBP23.26■■□□□ 1.31
CAPN1-203ENST00000525013 JAG2Q9Y219 1238 aa23.26■■□□□ 1.31
CAPN1-203ENST00000525013 PITPNM2Q9BZ72 1349 aa23.26■■□□□ 1.31
CAPN1-203ENST00000525013 WNT10BO00744 389 aa23.25■■□□□ 1.31
CAPN1-203ENST00000525013 SASH1O94885 1247 aa23.25■■□□□ 1.31
CAPN1-203ENST00000525013 GYG1P46976 350 aa23.25■■□□□ 1.31
CAPN1-203ENST00000525013 KIF16BQ96L93 1317 aa23.25■■□□□ 1.31
CAPN1-203ENST00000525013 F8W031 263 aaPredicted RBP23.24■■□□□ 1.31
CAPN1-203ENST00000525013 HIBADHP31937 336 aaKnown RBP23.24■■□□□ 1.31
CAPN1-203ENST00000525013 CTCFP49711 727 aaPredicted RBP23.24■■□□□ 1.31
CAPN1-203ENST00000525013 CERS5Q8N5B7 392 aa23.24■■□□□ 1.31
CAPN1-203ENST00000525013 BEGAINQ9BUH8 593 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms