RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 PDE3AQ14432 1141 aa15.6■□□□□ 0.09
CCNC-216ENST00000523961 MVPQ14764 893 aaKnown RBP15.6■□□□□ 0.09
CCNC-216ENST00000523961 TXNRD3Q86VQ6 643 aa15.6■□□□□ 0.09
CCNC-216ENST00000523961 COPRSQ9NQ92 184 aa15.6■□□□□ 0.09
CCNC-216ENST00000523961 SNAP23O00161 211 aa15.59■□□□□ 0.09
CCNC-216ENST00000523961 PSMD14O00487 310 aa15.59■□□□□ 0.09
CCNC-216ENST00000523961 CIAO1O76071 339 aa15.59■□□□□ 0.09
CCNC-216ENST00000523961 KLRK1P26718 216 aa15.59■□□□□ 0.09
CCNC-216ENST00000523961 C1QTNF8P60827 252 aa15.59■□□□□ 0.09
CCNC-216ENST00000523961 RBM46Q8TBY0 533 aaKnown RBP15.59■□□□□ 0.09
CCNC-216ENST00000523961 CHMP4BQ9H444 224 aaKnown RBP15.59■□□□□ 0.09
CCNC-216ENST00000523961 TAF1DQ9H5J8 278 aaPredicted RBP15.59■□□□□ 0.09
CCNC-216ENST00000523961 DDX19BQ9UMR2 479 aa15.59■□□□□ 0.09
CCNC-216ENST00000523961 COG6Q9Y2V7 657 aa15.59■□□□□ 0.09
CCNC-216ENST00000523961 PDE8BO95263 885 aa15.58■□□□□ 0.08
CCNC-216ENST00000523961 EPHX2P34913 555 aa15.58■□□□□ 0.08
CCNC-216ENST00000523961 GMPSP49915 693 aaPredicted RBP15.58■□□□□ 0.08
CCNC-216ENST00000523961 SCNN1DP51172 638 aa15.58■□□□□ 0.08
CCNC-216ENST00000523961 ATG9AQ7Z3C6 839 aa15.58■□□□□ 0.08
CCNC-216ENST00000523961 ZNF804AQ7Z570 1209 aa15.58■□□□□ 0.08
CCNC-216ENST00000523961 VGLL2Q8N8G2 317 aa15.58■□□□□ 0.08
CCNC-216ENST00000523961 SIL1Q9H173 461 aa15.58■□□□□ 0.08
CCNC-216ENST00000523961 KCNQ5Q9NR82 932 aa15.58■□□□□ 0.08
CCNC-216ENST00000523961 PA2G4Q9UQ80 394 aaKnown RBP15.58■□□□□ 0.08
CCNC-216ENST00000523961 SCN4AP35499 1836 aa15.58■□□□□ 0.08
CCNC-216ENST00000523961 IRS2Q9Y4H2 1338 aa15.58■□□□□ 0.08
CCNC-216ENST00000523961 A0A1B0GUL6 1792 aa15.57■□□□□ 0.08
CCNC-216ENST00000523961 USP17L3A6NCW0 530 aa15.57■□□□□ 0.08
CCNC-216ENST00000523961 USP17L4A6NCW7 530 aa15.57■□□□□ 0.08
CCNC-216ENST00000523961 VIL1P09327 827 aaKnown RBP15.57■□□□□ 0.08
CCNC-216ENST00000523961 RPS12P25398 132 aaKnown RBP15.57■□□□□ 0.08
CCNC-216ENST00000523961 IL15P40933 162 aaPredicted RBP15.57■□□□□ 0.08
CCNC-216ENST00000523961 ATP8B2P98198 1209 aa15.57■□□□□ 0.08
CCNC-216ENST00000523961 USP17L1Q7RTZ2 530 aa15.57■□□□□ 0.08
CCNC-216ENST00000523961 PNMA8AQ86V59 439 aaPredicted RBP15.57■□□□□ 0.08
CCNC-216ENST00000523961 DPF2Q92785 391 aa15.57■□□□□ 0.08
CCNC-216ENST00000523961 C1orf115Q9H7X2 142 aa15.57■□□□□ 0.08
CCNC-216ENST00000523961 GPRC5DQ9NZD1 345 aa15.57■□□□□ 0.08
CCNC-216ENST00000523961 CEP126Q9P2H0 1117 aa15.57■□□□□ 0.08
CCNC-216ENST00000523961 PNMA6EA0A0J9YXQ4 647 aa15.56■□□□□ 0.08
CCNC-216ENST00000523961 EPS15P42566 896 aa15.56■□□□□ 0.08
CCNC-216ENST00000523961 PUM3Q15397 648 aaKnown RBP15.56■□□□□ 0.08
CCNC-216ENST00000523961 SMC1BQ8NDV3 1235 aa15.56■□□□□ 0.08
CCNC-216ENST00000523961 CD209Q9NNX6 404 aa15.56■□□□□ 0.08
CCNC-216ENST00000523961 ZBTB12Q9Y330 459 aaPredicted RBP15.56■□□□□ 0.08
CCNC-216ENST00000523961 IFIT1P09914 478 aaKnown RBP15.55■□□□□ 0.08
CCNC-216ENST00000523961 FSTL1Q12841 308 aa15.55■□□□□ 0.08
CCNC-216ENST00000523961 POLA2Q14181 598 aa15.55■□□□□ 0.08
CCNC-216ENST00000523961 C20orf194Q5TEA3 1177 aa15.55■□□□□ 0.08
CCNC-216ENST00000523961 RSBN1LQ6PCB5 846 aaPredicted RBP15.55■□□□□ 0.08
CCNC-216ENST00000523961 SSH3Q8TE77 659 aa15.55■□□□□ 0.08
CCNC-216ENST00000523961 ADARB2Q9NS39 739 aaKnown RBP15.55■□□□□ 0.08
CCNC-216ENST00000523961 CNOT7Q9UIV1 285 aaKnown RBP15.55■□□□□ 0.08
CCNC-216ENST00000523961 SCN9AQ15858 1988 aa15.55■□□□□ 0.08
CCNC-216ENST00000523961 H7C1D1 291 aa15.54■□□□□ 0.08
CCNC-216ENST00000523961 IL1R1P14778 569 aa15.54■□□□□ 0.08
CCNC-216ENST00000523961 FGFR2P21802 821 aa15.54■□□□□ 0.08
CCNC-216ENST00000523961 HIBADHP31937 336 aaKnown RBP15.54■□□□□ 0.08
CCNC-216ENST00000523961 EAPPQ56P03 285 aaPredicted RBP15.54■□□□□ 0.08
CCNC-216ENST00000523961 CAVIN4Q5BKX8 364 aa15.54■□□□□ 0.08
CCNC-216ENST00000523961 STRIP1Q5VSL9 837 aa15.54■□□□□ 0.08
CCNC-216ENST00000523961 TTLL5Q6EMB2 1281 aa15.54■□□□□ 0.08
CCNC-216ENST00000523961 USP50Q70EL3 339 aaPredicted RBP15.54■□□□□ 0.08
CCNC-216ENST00000523961 LDHDQ86WU2 507 aa15.54■□□□□ 0.08
CCNC-216ENST00000523961 AGBL3Q8NEM8 1001 aa15.54■□□□□ 0.08
CCNC-216ENST00000523961 FAM84BQ96KN1 310 aaPredicted RBP15.54■□□□□ 0.08
CCNC-216ENST00000523961 ZBTB40Q9NUA8 1239 aa15.54■□□□□ 0.08
CCNC-216ENST00000523961 ZNF609O15014 1411 aa15.53■□□□□ 0.08
CCNC-216ENST00000523961 SLC5A1P13866 664 aa15.53■□□□□ 0.08
CCNC-216ENST00000523961 GYG1P46976 350 aa15.53■□□□□ 0.08
CCNC-216ENST00000523961 RRP1P56182 461 aaKnown RBP15.53■□□□□ 0.08
CCNC-216ENST00000523961 G3BP1Q13283 466 aaKnown RBP eCLIP15.53■□□□□ 0.08
CCNC-216ENST00000523961 DACT2Q5SW24 774 aa15.53■□□□□ 0.08
CCNC-216ENST00000523961 CEP85Q6P2H3 762 aa15.53■□□□□ 0.08
CCNC-216ENST00000523961 VPS37DQ86XT2 251 aa15.53■□□□□ 0.08
CCNC-216ENST00000523961 MICALL2Q8IY33 904 aa15.53■□□□□ 0.08
CCNC-216ENST00000523961 LPIN2Q92539 896 aa15.53■□□□□ 0.08
CCNC-216ENST00000523961 FBXW7Q969H0 707 aa15.53■□□□□ 0.08
CCNC-216ENST00000523961 MYO3BQ8WXR4 1341 aa15.52■□□□□ 0.08
CCNC-216ENST00000523961 POTEIP0CG38 1075 aa15.52■□□□□ 0.08
CCNC-216ENST00000523961 POTEJP0CG39 1038 aa15.52■□□□□ 0.08
CCNC-216ENST00000523961 GTF2IP78347 998 aa15.52■□□□□ 0.08
CCNC-216ENST00000523961 ATP2B3Q16720 1220 aa15.52■□□□□ 0.08
CCNC-216ENST00000523961 CHADLQ6NUI6 762 aa15.52■□□□□ 0.08
CCNC-216ENST00000523961 FBXO33Q7Z6M2 555 aa15.52■□□□□ 0.08
CCNC-216ENST00000523961 TDRD7Q8NHU6 1098 aaKnown RBP15.52■□□□□ 0.08
CCNC-216ENST00000523961 GMLQ99445 158 aa15.52■□□□□ 0.08
CCNC-216ENST00000523961 CLEC11AQ9Y240 323 aa15.52■□□□□ 0.08
CCNC-216ENST00000523961 RPAP2Q8IXW5 612 aaPredicted RBP15.51■□□□□ 0.07
CCNC-216ENST00000523961 AKAP2Q9Y2D5 859 aa15.51■□□□□ 0.07
CCNC-216ENST00000523961 PSME4Q14997 1843 aa15.51■□□□□ 0.07
CCNC-216ENST00000523961 SHTN1A0MZ66 631 aa15.5■□□□□ 0.07
CCNC-216ENST00000523961 SURF6O75683 361 aaKnown RBP15.5■□□□□ 0.07
CCNC-216ENST00000523961 SASH1O94885 1247 aa15.5■□□□□ 0.07
CCNC-216ENST00000523961 USP17L8P0C7I0 530 aa15.5■□□□□ 0.07
CCNC-216ENST00000523961 TFCP2Q12800 502 aa15.5■□□□□ 0.07
CCNC-216ENST00000523961 OS9Q13438 667 aaPredicted RBP15.5■□□□□ 0.07
CCNC-216ENST00000523961 NOP58Q9Y2X3 529 aaKnown RBP15.5■□□□□ 0.07
CCNC-216ENST00000523961 FAM205AQ6ZU69 1335 aa15.49■□□□□ 0.07
CCNC-216ENST00000523961 HMMRO75330 724 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms