RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 EPHX2P34913 555 aa20.31■□□□□ 0.84
TNPO1-212ENST00000520850 LRRC24Q50LG9 513 aa20.31■□□□□ 0.84
TNPO1-212ENST00000520850 VGLL2Q8N8G2 317 aa20.31■□□□□ 0.84
TNPO1-212ENST00000520850 SMC1BQ8NDV3 1235 aa20.31■□□□□ 0.84
TNPO1-212ENST00000520850 PSMD14O00487 310 aa20.3■□□□□ 0.84
TNPO1-212ENST00000520850 USP50Q70EL3 339 aaPredicted RBP20.3■□□□□ 0.84
TNPO1-212ENST00000520850 TXNRD3Q86VQ6 643 aa20.3■□□□□ 0.84
TNPO1-212ENST00000520850 ITPRIPQ8IWB1 547 aa20.3■□□□□ 0.84
TNPO1-212ENST00000520850 AGBL3Q8NEM8 1001 aa20.3■□□□□ 0.84
TNPO1-212ENST00000520850 HELBQ8NG08 1087 aaPredicted RBP20.3■□□□□ 0.84
TNPO1-212ENST00000520850 A0A1B0GUL6 1792 aa20.29■□□□□ 0.84
TNPO1-212ENST00000520850 USP17L3A6NCW0 530 aa20.29■□□□□ 0.84
TNPO1-212ENST00000520850 USP17L4A6NCW7 530 aa20.29■□□□□ 0.84
TNPO1-212ENST00000520850 STRIP1Q5VSL9 837 aa20.29■□□□□ 0.84
TNPO1-212ENST00000520850 USP17L1Q7RTZ2 530 aa20.29■□□□□ 0.84
TNPO1-212ENST00000520850 ATG9AQ7Z3C6 839 aa20.29■□□□□ 0.84
TNPO1-212ENST00000520850 LDHDQ86WU2 507 aa20.29■□□□□ 0.84
TNPO1-212ENST00000520850 CD209Q9NNX6 404 aa20.29■□□□□ 0.84
TNPO1-212ENST00000520850 KCNQ5Q9NR82 932 aa20.29■□□□□ 0.84
TNPO1-212ENST00000520850 SRGAP3O43295 1099 aa20.28■□□□□ 0.84
TNPO1-212ENST00000520850 IL1R1P14778 569 aa20.28■□□□□ 0.84
TNPO1-212ENST00000520850 IL15P40933 162 aaPredicted RBP20.28■□□□□ 0.84
TNPO1-212ENST00000520850 GMPSP49915 693 aaPredicted RBP20.28■□□□□ 0.84
TNPO1-212ENST00000520850 METTL24Q5JXM2 366 aa20.28■□□□□ 0.84
TNPO1-212ENST00000520850 ZNF804AQ7Z570 1209 aa20.28■□□□□ 0.84
TNPO1-212ENST00000520850 KLHDC4Q8TBB5 520 aa20.28■□□□□ 0.84
TNPO1-212ENST00000520850 PANK1Q8TE04 598 aa20.28■□□□□ 0.84
TNPO1-212ENST00000520850 ADARB2Q9NS39 739 aaKnown RBP20.28■□□□□ 0.84
TNPO1-212ENST00000520850 DDX19BQ9UMR2 479 aa20.28■□□□□ 0.84
TNPO1-212ENST00000520850 PSME4Q14997 1843 aa20.27■□□□□ 0.84
TNPO1-212ENST00000520850 ZBTB22O15209 634 aa20.27■□□□□ 0.84
TNPO1-212ENST00000520850 EPS15P42566 896 aa20.27■□□□□ 0.84
TNPO1-212ENST00000520850 ATP8B2P98198 1209 aa20.27■□□□□ 0.84
TNPO1-212ENST00000520850 MVPQ14764 893 aaKnown RBP20.27■□□□□ 0.84
TNPO1-212ENST00000520850 RSBN1LQ6PCB5 846 aaPredicted RBP20.27■□□□□ 0.84
TNPO1-212ENST00000520850 GMLQ99445 158 aa20.27■□□□□ 0.84
TNPO1-212ENST00000520850 CNOT7Q9UIV1 285 aaKnown RBP20.27■□□□□ 0.84
TNPO1-212ENST00000520850 MYO3BQ8WXR4 1341 aa20.27■□□□□ 0.83
TNPO1-212ENST00000520850 SCN9AQ15858 1988 aa20.26■□□□□ 0.83
TNPO1-212ENST00000520850 SNAP23O00161 211 aa20.26■□□□□ 0.83
TNPO1-212ENST00000520850 PLIN1O60240 522 aa20.26■□□□□ 0.83
TNPO1-212ENST00000520850 FGFR2P21802 821 aa20.26■□□□□ 0.83
TNPO1-212ENST00000520850 SSH3Q8TE77 659 aa20.26■□□□□ 0.83
TNPO1-212ENST00000520850 H7C1D1 291 aa20.25■□□□□ 0.83
TNPO1-212ENST00000520850 SASH1O94885 1247 aa20.25■□□□□ 0.83
TNPO1-212ENST00000520850 KLRK1P26718 216 aa20.25■□□□□ 0.83
TNPO1-212ENST00000520850 FKBP1AP62942 108 aaKnown RBP20.25■□□□□ 0.83
TNPO1-212ENST00000520850 POLA2Q14181 598 aa20.25■□□□□ 0.83
TNPO1-212ENST00000520850 PUM3Q15397 648 aaKnown RBP20.25■□□□□ 0.83
TNPO1-212ENST00000520850 CHADLQ6NUI6 762 aa20.25■□□□□ 0.83
TNPO1-212ENST00000520850 FBXO33Q7Z6M2 555 aa20.25■□□□□ 0.83
TNPO1-212ENST00000520850 ZC3H15Q8WU90 426 aaKnown RBP20.25■□□□□ 0.83
TNPO1-212ENST00000520850 FAM84BQ96KN1 310 aaPredicted RBP20.25■□□□□ 0.83
TNPO1-212ENST00000520850 CEP126Q9P2H0 1117 aa20.25■□□□□ 0.83
TNPO1-212ENST00000520850 PGAP2Q9UHJ9 254 aa20.25■□□□□ 0.83
TNPO1-212ENST00000520850 HIBADHP31937 336 aaKnown RBP20.24■□□□□ 0.83
TNPO1-212ENST00000520850 DACT2Q5SW24 774 aa20.24■□□□□ 0.83
TNPO1-212ENST00000520850 TTLL5Q6EMB2 1281 aa20.24■□□□□ 0.83
TNPO1-212ENST00000520850 TDRD7Q8NHU6 1098 aaKnown RBP20.24■□□□□ 0.83
TNPO1-212ENST00000520850 LPIN2Q92539 896 aa20.24■□□□□ 0.83
TNPO1-212ENST00000520850 ADAMTSL1Q8N6G6 1762 aa20.23■□□□□ 0.83
TNPO1-212ENST00000520850 PNMA6EA0A0J9YXQ4 647 aa20.23■□□□□ 0.83
TNPO1-212ENST00000520850 IFIT1P09914 478 aaKnown RBP20.23■□□□□ 0.83
TNPO1-212ENST00000520850 ZNF280AP59817 542 aaPredicted RBP20.23■□□□□ 0.83
TNPO1-212ENST00000520850 CAVIN4Q5BKX8 364 aa20.23■□□□□ 0.83
TNPO1-212ENST00000520850 YTHDC1Q96MU7 727 aaKnown RBP20.23■□□□□ 0.83
TNPO1-212ENST00000520850 ZBTB40Q9NUA8 1239 aa20.23■□□□□ 0.83
TNPO1-212ENST00000520850 ZBTB12Q9Y330 459 aaPredicted RBP20.23■□□□□ 0.83
TNPO1-212ENST00000520850 HSPA6P17066 643 aa20.22■□□□□ 0.83
TNPO1-212ENST00000520850 PA2G4Q9UQ80 394 aaKnown RBP20.22■□□□□ 0.83
TNPO1-212ENST00000520850 FAM205AQ6ZU69 1335 aa20.22■□□□□ 0.83
TNPO1-212ENST00000520850 RPAP2Q8IXW5 612 aaPredicted RBP20.21■□□□□ 0.83
TNPO1-212ENST00000520850 MICALL2Q8IY33 904 aa20.21■□□□□ 0.83
TNPO1-212ENST00000520850 SIL1Q9H173 461 aa20.21■□□□□ 0.83
TNPO1-212ENST00000520850 NOP58Q9Y2X3 529 aaKnown RBP20.21■□□□□ 0.83
TNPO1-212ENST00000520850 USP17L8P0C7I0 530 aa20.2■□□□□ 0.82
TNPO1-212ENST00000520850 POTEIP0CG38 1075 aa20.2■□□□□ 0.82
TNPO1-212ENST00000520850 POTEJP0CG39 1038 aa20.2■□□□□ 0.82
TNPO1-212ENST00000520850 SLC5A1P13866 664 aa20.2■□□□□ 0.82
TNPO1-212ENST00000520850 EAPPQ56P03 285 aaPredicted RBP20.2■□□□□ 0.82
TNPO1-212ENST00000520850 AKAP2Q9Y2D5 859 aa20.2■□□□□ 0.82
TNPO1-212ENST00000520850 COG6Q9Y2V7 657 aa20.2■□□□□ 0.82
TNPO1-212ENST00000520850 ITGBL1O95965 494 aaPredicted RBP20.19■□□□□ 0.82
TNPO1-212ENST00000520850 GYG1P46976 350 aa20.19■□□□□ 0.82
TNPO1-212ENST00000520850 GTF2IP78347 998 aa20.19■□□□□ 0.82
TNPO1-212ENST00000520850 G3BP1Q13283 466 aaKnown RBP eCLIP20.19■□□□□ 0.82
TNPO1-212ENST00000520850 CEP85Q6P2H3 762 aa20.19■□□□□ 0.82
TNPO1-212ENST00000520850 HIRAP54198 1017 aaPredicted RBP20.18■□□□□ 0.82
TNPO1-212ENST00000520850 VPS37DQ86XT2 251 aa20.18■□□□□ 0.82
TNPO1-212ENST00000520850 OGFOD1Q8N543 542 aa20.18■□□□□ 0.82
TNPO1-212ENST00000520850 CLEC11AQ9Y240 323 aa20.18■□□□□ 0.82
TNPO1-212ENST00000520850 ZNF646O15015 1829 aaPredicted RBP20.18■□□□□ 0.82
TNPO1-212ENST00000520850 APLP1P51693 650 aa20.17■□□□□ 0.82
TNPO1-212ENST00000520850 ATP2B3Q16720 1220 aa20.17■□□□□ 0.82
TNPO1-212ENST00000520850 CNTROBQ8N137 903 aa20.17■□□□□ 0.82
TNPO1-212ENST00000520850 GPR108Q9NPR9 543 aa20.17■□□□□ 0.82
TNPO1-212ENST00000520850 PASKQ96RG2 1323 aa20.17■□□□□ 0.82
TNPO1-212ENST00000520850 C20orf194Q5TEA3 1177 aa20.16■□□□□ 0.82
TNPO1-212ENST00000520850 BCAMP50895 628 aa20.15■□□□□ 0.82
TNPO1-212ENST00000520850 RRP1P56182 461 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms