RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 WDR43Q15061 677 aaKnown RBP eCLIP3.69□□□□□ -1.82
MCF2-208ENST00000519895 MCTP2Q6DN12 878 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 C2orf69Q8N8R5 385 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 PIGBQ92521 554 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 TAOK3Q9H2K8 898 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 WTIPA6NIX2 430 aaPredicted RBP3.69□□□□□ -1.82
MCF2-208ENST00000519895 PRKAR2BP31323 418 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 IRS1P35568 1242 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 NBL1P41271 181 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 MMP14P50281 582 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 CABP4P57796 275 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 CDC37L1Q7L3B6 337 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 ANKLE1Q8NAG6 615 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 PHOX2BQ99453 314 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 ZNF318Q5VUA4 2279 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 A0A0C4DFX4 3053 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 KLRG2A4D1S0 409 aaPredicted RBP3.69□□□□□ -1.82
MCF2-208ENST00000519895 SNRPA1P09661 255 aaKnown RBP3.69□□□□□ -1.82
MCF2-208ENST00000519895 CC2D1BQ5T0F9 858 aaKnown RBP3.69□□□□□ -1.82
MCF2-208ENST00000519895 RASAL3Q86YV0 1011 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 PLCD3Q8N3E9 789 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 IL17REQ8NFR9 667 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 RTF1Q92541 710 aaKnown RBP3.69□□□□□ -1.82
MCF2-208ENST00000519895 ACSBG1Q96GR2 724 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 COG5Q9UP83 839 aa3.69□□□□□ -1.82
MCF2-208ENST00000519895 RTL9Q8NET4 1388 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 AFDNP55196 1824 aaKnown RBP3.68□□□□□ -1.82
MCF2-208ENST00000519895 MYH14Q7Z406 1995 aaKnown RBP3.68□□□□□ -1.82
MCF2-208ENST00000519895 LOC102724428A0A0B4J2F2 783 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 FARP2O94887 1054 aaPredicted RBP3.68□□□□□ -1.82
MCF2-208ENST00000519895 STARD3NLO95772 234 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 SIK1P57059 783 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 INHBEP58166 350 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 ALDH1L2Q3SY69 923 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 HSP90AB3PQ58FF7 597 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 ZNF790Q6PG37 636 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 A0A0G2JMZ2 1700 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 ENO4A6NNW6 628 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 ERC2O15083 957 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 U2AF1L5P0DN76 240 aaPredicted RBP3.68□□□□□ -1.82
MCF2-208ENST00000519895 CYP19A1P11511 503 aaPredicted RBP3.68□□□□□ -1.82
MCF2-208ENST00000519895 ZNF157P51786 506 aaPredicted RBP3.68□□□□□ -1.82
MCF2-208ENST00000519895 EIF4A1P60842 406 aaKnown RBP3.68□□□□□ -1.82
MCF2-208ENST00000519895 U2AF1Q01081 240 aaKnown RBP eCLIP3.68□□□□□ -1.82
MCF2-208ENST00000519895 SLC9C1Q4G0N8 1177 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 FAM117BQ6P1L5 589 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 BICDL1Q6ZP65 573 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 TMC4Q7Z404 712 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 TTYH1Q9H313 450 aaPredicted RBP3.68□□□□□ -1.82
MCF2-208ENST00000519895 ZBTB47Q9UFB7 747 aaPredicted RBP3.68□□□□□ -1.82
MCF2-208ENST00000519895 TRIM35Q9UPQ4 493 aa3.68□□□□□ -1.82
MCF2-208ENST00000519895 CHD6Q8TD26 2715 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 TLL1O43897 1013 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 ADRB1P08588 477 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 DDX10Q13206 875 aaKnown RBP3.67□□□□□ -1.82
MCF2-208ENST00000519895 AAMPQ13685 434 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 LRSAM1Q6UWE0 723 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 ARHGAP45Q92619 1136 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 MYH16Q9H6N6 1097 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 EFCC1Q9HA90 598 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 GBA2Q9HCG7 927 aaPredicted RBP3.67□□□□□ -1.82
MCF2-208ENST00000519895 ADARB2Q9NS39 739 aaKnown RBP3.67□□□□□ -1.82
MCF2-208ENST00000519895 NARFQ9UHQ1 456 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 ZFHX2Q9C0A1 2572 aaPredicted RBP3.67□□□□□ -1.82
MCF2-208ENST00000519895 ZDBF2Q9HCK1 2354 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 NUP98P52948 1817 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 FAM86C2PA6NEL3 165 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 E9PSI1 815 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 PRIM1P49642 420 aaKnown RBP3.67□□□□□ -1.82
MCF2-208ENST00000519895 DMWDQ09019 674 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 TEFQ10587 303 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 SLC10A5Q5PT55 438 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 LRP10Q7Z4F1 713 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 TRAF5O00463 557 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 TBC1D8O95759 1140 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 PARP10Q53GL7 1025 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 INTS5Q6P9B9 1019 aaKnown RBP3.67□□□□□ -1.82
MCF2-208ENST00000519895 AEBP1Q8IUX7 1158 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 HYPKQ9NX55 129 aa3.67□□□□□ -1.82
MCF2-208ENST00000519895 UNC80Q8N2C7 3258 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 USP42Q9H9J4 1324 aaKnown RBP3.66□□□□□ -1.82
MCF2-208ENST00000519895 LTBP2Q14767 1821 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 POTEB3A0JP26 581 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 TMEM8BA6NDV4 472 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 TM4SF1P30408 202 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 TCF15Q12870 199 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 KIAA0319Q5VV43 1072 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 POTEBQ6S5H4 581 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 TTC5Q8N0Z6 440 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 ZGPATQ8N5A5 531 aaKnown RBP3.66□□□□□ -1.82
MCF2-208ENST00000519895 SPATA18Q8TC71 538 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 PLA2G12BQ9BX93 195 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 HDAC5Q9UQL6 1122 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 ZNF652Q9Y2D9 606 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 ZBED9Q6R2W3 1325 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 ZMYND10O75800 440 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 CC2D2BQ6DHV5 1058 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 PHACTR3Q96KR7 559 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 ADAMTS8Q9UP79 889 aa3.66□□□□□ -1.82
MCF2-208ENST00000519895 TRPC6Q9Y210 931 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms