RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 CXCL9Q07325 125 aa28.01■■■□□ 2.07
SKP1-206ENST00000519321 ZNF804AQ7Z570 1209 aa28.01■■■□□ 2.07
SKP1-206ENST00000519321 SUPT16HQ9Y5B9 1047 aaKnown RBP28.01■■■□□ 2.07
SKP1-206ENST00000519321 YDJCA8MPS7 323 aa28■■■□□ 2.07
SKP1-206ENST00000519321 SNAP23O00161 211 aa28■■■□□ 2.07
SKP1-206ENST00000519321 TXNRD3Q86VQ6 643 aa28■■■□□ 2.07
SKP1-206ENST00000519321 GJA3Q9Y6H8 435 aa28■■■□□ 2.07
SKP1-206ENST00000519321 IRS2Q9Y4H2 1338 aa27.99■■■□□ 2.07
SKP1-206ENST00000519321 WDR90Q96KV7 1748 aa27.99■■■□□ 2.07
SKP1-206ENST00000519321 IFIT1P09914 478 aaKnown RBP27.99■■■□□ 2.07
SKP1-206ENST00000519321 LPIN2Q92539 896 aa27.99■■■□□ 2.07
SKP1-206ENST00000519321 L3MBTL3Q96JM7 780 aaPredicted RBP27.99■■■□□ 2.07
SKP1-206ENST00000519321 SURF6O75683 361 aaKnown RBP27.98■■■□□ 2.07
SKP1-206ENST00000519321 RAD17O75943 681 aa27.98■■■□□ 2.07
SKP1-206ENST00000519321 KLRK1P26718 216 aa27.98■■■□□ 2.07
SKP1-206ENST00000519321 AKAP2Q9Y2D5 859 aa27.98■■■□□ 2.07
SKP1-206ENST00000519321 NOP58Q9Y2X3 529 aaKnown RBP27.98■■■□□ 2.07
SKP1-206ENST00000519321 IQCA1LA6NCM1 817 aa27.97■■■□□ 2.07
SKP1-206ENST00000519321 SLC5A1P13866 664 aa27.97■■■□□ 2.07
SKP1-206ENST00000519321 FGFR2P21802 821 aa27.97■■■□□ 2.07
SKP1-206ENST00000519321 OS9Q13438 667 aaPredicted RBP27.97■■■□□ 2.07
SKP1-206ENST00000519321 VEGFAP15692 232 aaPredicted RBP27.96■■■□□ 2.07
SKP1-206ENST00000519321 AAMPQ13685 434 aa27.96■■■□□ 2.07
SKP1-206ENST00000519321 HSP90AB4PQ58FF6 505 aa27.96■■■□□ 2.07
SKP1-206ENST00000519321 CAVIN4Q5BKX8 364 aa27.96■■■□□ 2.07
SKP1-206ENST00000519321 CRBNQ96SW2 442 aa27.96■■■□□ 2.07
SKP1-206ENST00000519321 RRAGCQ9HB90 399 aa27.96■■■□□ 2.07
SKP1-206ENST00000519321 CD209Q9NNX6 404 aa27.96■■■□□ 2.07
SKP1-206ENST00000519321 HIBADHP31937 336 aaKnown RBP27.95■■■□□ 2.06
SKP1-206ENST00000519321 ATP2B3Q16720 1220 aa27.95■■■□□ 2.06
SKP1-206ENST00000519321 VPS37DQ86XT2 251 aa27.95■■■□□ 2.06
SKP1-206ENST00000519321 NMRK2Q9NPI5 230 aa27.95■■■□□ 2.06
SKP1-206ENST00000519321 USP17L3A6NCW0 530 aa27.94■■■□□ 2.06
SKP1-206ENST00000519321 USP17L4A6NCW7 530 aa27.94■■■□□ 2.06
SKP1-206ENST00000519321 PSMD14O00487 310 aa27.94■■■□□ 2.06
SKP1-206ENST00000519321 USP17L1Q7RTZ2 530 aa27.94■■■□□ 2.06
SKP1-206ENST00000519321 FAM84BQ96KN1 310 aaPredicted RBP27.94■■■□□ 2.06
SKP1-206ENST00000519321 SCN4AP35499 1836 aa27.93■■■□□ 2.06
SKP1-206ENST00000519321 IL1R1P14778 569 aa27.93■■■□□ 2.06
SKP1-206ENST00000519321 RPS12P25398 132 aaKnown RBP27.93■■■□□ 2.06
SKP1-206ENST00000519321 LMOD1P29536 600 aaPredicted RBP27.93■■■□□ 2.06
SKP1-206ENST00000519321 TFCP2Q12800 502 aa27.93■■■□□ 2.06
SKP1-206ENST00000519321 VIL1P09327 827 aaKnown RBP27.92■■■□□ 2.06
SKP1-206ENST00000519321 GYG1P46976 350 aa27.92■■■□□ 2.06
SKP1-206ENST00000519321 STRIP1Q5VSL9 837 aa27.92■■■□□ 2.06
SKP1-206ENST00000519321 FBXO33Q7Z6M2 555 aa27.92■■■□□ 2.06
SKP1-206ENST00000519321 ERC1Q8IUD2 1116 aa27.92■■■□□ 2.06
SKP1-206ENST00000519321 KCNQ5Q9NR82 932 aa27.92■■■□□ 2.06
SKP1-206ENST00000519321 HACL1Q9UJ83 578 aa27.92■■■□□ 2.06
SKP1-206ENST00000519321 PSME4Q14997 1843 aa27.92■■■□□ 2.06
SKP1-206ENST00000519321 SIRT2Q8IXJ6 389 aa27.91■■■□□ 2.06
SKP1-206ENST00000519321 DPF2Q92785 391 aa27.91■■■□□ 2.06
SKP1-206ENST00000519321 SCN9AQ15858 1988 aa27.91■■■□□ 2.06
SKP1-206ENST00000519321 SASH1O94885 1247 aa27.9■■■□□ 2.06
SKP1-206ENST00000519321 C16orf71Q8IYS4 520 aaPredicted RBP27.9■■■□□ 2.06
SKP1-206ENST00000519321 GPR108Q9NPR9 543 aa27.9■■■□□ 2.06
SKP1-206ENST00000519321 POTECB2RU33 542 aa27.89■■■□□ 2.06
SKP1-206ENST00000519321 KIF3CO14782 793 aa27.89■■■□□ 2.06
SKP1-206ENST00000519321 GMPSP49915 693 aaPredicted RBP27.89■■■□□ 2.06
SKP1-206ENST00000519321 SCNN1DP51172 638 aa27.89■■■□□ 2.06
SKP1-206ENST00000519321 TTLL5Q6EMB2 1281 aa27.89■■■□□ 2.06
SKP1-206ENST00000519321 RSBN1LQ6PCB5 846 aaPredicted RBP27.89■■■□□ 2.06
SKP1-206ENST00000519321 AGBL3Q8NEM8 1001 aa27.89■■■□□ 2.06
SKP1-206ENST00000519321 TDRD7Q8NHU6 1098 aaKnown RBP27.89■■■□□ 2.06
SKP1-206ENST00000519321 ZNF609O15014 1411 aa27.89■■■□□ 2.06
SKP1-206ENST00000519321 MYO3BQ8WXR4 1341 aa27.89■■■□□ 2.05
SKP1-206ENST00000519321 FBXW7Q969H0 707 aa27.88■■■□□ 2.05
SKP1-206ENST00000519321 GPRC5DQ9NZD1 345 aa27.88■■■□□ 2.05
SKP1-206ENST00000519321 A0A1B0GUL7 405 aa27.87■■■□□ 2.05
SKP1-206ENST00000519321 GTF2IP78347 998 aa27.87■■■□□ 2.05
SKP1-206ENST00000519321 GNL3LQ9NVN8 582 aaKnown RBP27.87■■■□□ 2.05
SKP1-206ENST00000519321 EXOC6BQ9Y2D4 811 aa27.87■■■□□ 2.05
SKP1-206ENST00000519321 RAB11FIP3O75154 756 aa27.86■■■□□ 2.05
SKP1-206ENST00000519321 EPHX2P34913 555 aa27.86■■■□□ 2.05
SKP1-206ENST00000519321 BCAMP50895 628 aa27.86■■■□□ 2.05
SKP1-206ENST00000519321 DACT2Q5SW24 774 aa27.86■■■□□ 2.05
SKP1-206ENST00000519321 TAF1DQ9H5J8 278 aaPredicted RBP27.86■■■□□ 2.05
SKP1-206ENST00000519321 ZBTB12Q9Y330 459 aaPredicted RBP27.86■■■□□ 2.05
SKP1-206ENST00000519321 ARAP2Q8WZ64 1704 aa27.85■■■□□ 2.05
SKP1-206ENST00000519321 FRAT2O75474 233 aaPredicted RBP27.85■■■□□ 2.05
SKP1-206ENST00000519321 TIMM10P62072 90 aa27.85■■■□□ 2.05
SKP1-206ENST00000519321 PNMA8AQ86V59 439 aaPredicted RBP27.85■■■□□ 2.05
SKP1-206ENST00000519321 NEUROD6Q96NK8 337 aa27.85■■■□□ 2.05
SKP1-206ENST00000519321 H7C1D1 291 aa27.84■■■□□ 2.05
SKP1-206ENST00000519321 MMP14P50281 582 aa27.84■■■□□ 2.05
SKP1-206ENST00000519321 FKBP1AP62942 108 aaKnown RBP27.84■■■□□ 2.05
SKP1-206ENST00000519321 CNOT7Q9UIV1 285 aaKnown RBP27.84■■■□□ 2.05
SKP1-206ENST00000519321 FAM205AQ6ZU69 1335 aa27.84■■■□□ 2.05
SKP1-206ENST00000519321 ZBTB22O15209 634 aa27.83■■■□□ 2.05
SKP1-206ENST00000519321 TOMM70O94826 608 aa27.83■■■□□ 2.05
SKP1-206ENST00000519321 TNNI3KQ59H18 835 aa27.83■■■□□ 2.05
SKP1-206ENST00000519321 KIF1BPQ96EK5 621 aa27.83■■■□□ 2.05
SKP1-206ENST00000519321 XAGE2Q96GT9 111 aa27.83■■■□□ 2.05
SKP1-206ENST00000519321 ADARB2Q9NS39 739 aaKnown RBP27.83■■■□□ 2.05
SKP1-206ENST00000519321 PCDHB15Q9Y5E8 787 aa27.83■■■□□ 2.05
SKP1-206ENST00000519321 FPGT-TNNI3KV9GXZ4 949 aa27.83■■■□□ 2.05
SKP1-206ENST00000519321 EPS15P42566 896 aa27.82■■■□□ 2.04
SKP1-206ENST00000519321 GORABQ5T7V8 394 aa27.82■■■□□ 2.04
SKP1-206ENST00000519321 SEMA3EO15041 775 aa27.81■■■□□ 2.04
SKP1-206ENST00000519321 USP50Q70EL3 339 aaPredicted RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms