RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 COL4A1P02462 1669 aa16.3■□□□□ 0.2
DDX41-215ENST00000512431 POTEFA5A3E0 1075 aa16.29■□□□□ 0.2
DDX41-215ENST00000512431 OTOP1Q7RTM1 612 aa16.29■□□□□ 0.2
DDX41-215ENST00000512431 SLC10A4Q96EP9 437 aa16.29■□□□□ 0.2
DDX41-215ENST00000512431 ERO1AQ96HE7 468 aa16.29■□□□□ 0.2
DDX41-215ENST00000512431 CDC5LQ99459 802 aaKnown RBP16.29■□□□□ 0.2
DDX41-215ENST00000512431 ANGEL1Q9UNK9 670 aaKnown RBP16.29■□□□□ 0.2
DDX41-215ENST00000512431 PCCAP05165 728 aaPredicted RBP16.28■□□□□ 0.2
DDX41-215ENST00000512431 DACT2Q5SW24 774 aa16.28■□□□□ 0.2
DDX41-215ENST00000512431 STRIP1Q5VSL9 837 aa16.28■□□□□ 0.2
DDX41-215ENST00000512431 IFNL1Q8IU54 200 aa16.28■□□□□ 0.2
DDX41-215ENST00000512431 CCDC191Q8NCU4 936 aa16.28■□□□□ 0.2
DDX41-215ENST00000512431 MYD88Q99836 296 aa16.28■□□□□ 0.2
DDX41-215ENST00000512431 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
DDX41-215ENST00000512431 SASH1O94885 1247 aa16.27■□□□□ 0.2
DDX41-215ENST00000512431 LDLRAD1Q5T700 205 aa16.27■□□□□ 0.2
DDX41-215ENST00000512431 OTUD7BQ6GQQ9 843 aa16.27■□□□□ 0.2
DDX41-215ENST00000512431 COA1Q9GZY4 146 aa16.27■□□□□ 0.2
DDX41-215ENST00000512431 CWC25Q9NXE8 425 aaPredicted RBP16.27■□□□□ 0.2
DDX41-215ENST00000512431 MED23Q9ULK4 1368 aa16.26■□□□□ 0.19
DDX41-215ENST00000512431 ZBTB48P10074 688 aaPredicted RBP16.26■□□□□ 0.19
DDX41-215ENST00000512431 DUSP27Q5VZP5 1158 aa16.26■□□□□ 0.19
DDX41-215ENST00000512431 TMEM106CQ9BVX2 250 aa16.26■□□□□ 0.19
DDX41-215ENST00000512431 MXD3Q9BW11 206 aa16.26■□□□□ 0.19
DDX41-215ENST00000512431 PTPN22Q9Y2R2 807 aa16.26■□□□□ 0.19
DDX41-215ENST00000512431 PSME4Q14997 1843 aa16.25■□□□□ 0.19
DDX41-215ENST00000512431 PPP1R12BO60237 982 aaPredicted RBP16.25■□□□□ 0.19
DDX41-215ENST00000512431 TTLL5Q6EMB2 1281 aa16.25■□□□□ 0.19
DDX41-215ENST00000512431 CCT4P50991 539 aaKnown RBP16.24■□□□□ 0.19
DDX41-215ENST00000512431 FXR1P51114 621 aaKnown RBP eCLIP16.24■□□□□ 0.19
DDX41-215ENST00000512431 JARID2Q92833 1246 aaPredicted RBP16.24■□□□□ 0.19
DDX41-215ENST00000512431 EFCC1Q9HA90 598 aa16.24■□□□□ 0.19
DDX41-215ENST00000512431 BSDC1Q9NW68 430 aaPredicted RBP16.24■□□□□ 0.19
DDX41-215ENST00000512431 MINPP1Q9UNW1 487 aa16.24■□□□□ 0.19
DDX41-215ENST00000512431 DDX58O95786 925 aaKnown RBP16.23■□□□□ 0.19
DDX41-215ENST00000512431 EN2P19622 333 aaPredicted RBP16.23■□□□□ 0.19
DDX41-215ENST00000512431 ARHGEF6Q15052 776 aa16.23■□□□□ 0.19
DDX41-215ENST00000512431 KIAA0825Q8IV33 1275 aa16.23■□□□□ 0.19
DDX41-215ENST00000512431 CCDC146Q8IYE0 955 aa16.23■□□□□ 0.19
DDX41-215ENST00000512431 CD99L2Q8TCZ2 262 aa16.23■□□□□ 0.19
DDX41-215ENST00000512431 DEFB129Q9H1M3 183 aa16.23■□□□□ 0.19
DDX41-215ENST00000512431 PHAXQ9H814 394 aaKnown RBP16.23■□□□□ 0.19
DDX41-215ENST00000512431 LEMD3Q9Y2U8 911 aa16.23■□□□□ 0.19
DDX41-215ENST00000512431 WTIPA6NIX2 430 aaPredicted RBP16.22■□□□□ 0.19
DDX41-215ENST00000512431 UNCXA6NJT0 531 aa16.22■□□□□ 0.19
DDX41-215ENST00000512431 CTSWP56202 376 aa16.22■□□□□ 0.19
DDX41-215ENST00000512431 DLGAP5Q15398 846 aa16.22■□□□□ 0.19
DDX41-215ENST00000512431 MAP3K11Q16584 847 aa16.22■□□□□ 0.19
DDX41-215ENST00000512431 ARMC5Q96C12 935 aa16.22■□□□□ 0.19
DDX41-215ENST00000512431 WNK4Q96J92 1243 aa16.22■□□□□ 0.19
DDX41-215ENST00000512431 TRIM35Q9UPQ4 493 aa16.22■□□□□ 0.19
DDX41-215ENST00000512431 COL1A1P02452 1464 aaPredicted RBP16.22■□□□□ 0.19
DDX41-215ENST00000512431 IGF2BP3O00425 579 aaKnown RBP eCLIP16.21■□□□□ 0.19
DDX41-215ENST00000512431 SP3Q02447 781 aa16.21■□□□□ 0.19
DDX41-215ENST00000512431 SUPT20HL1Q3ZLR7 823 aa16.21■□□□□ 0.19
DDX41-215ENST00000512431 NBPF11Q86T75 865 aa16.21■□□□□ 0.19
DDX41-215ENST00000512431 RUNDC1Q96C34 613 aa16.21■□□□□ 0.19
DDX41-215ENST00000512431 METTL22Q9BUU2 404 aaPredicted RBP16.21■□□□□ 0.19
DDX41-215ENST00000512431 CHMP4AQ9BY43 222 aa16.21■□□□□ 0.19
DDX41-215ENST00000512431 FZD1Q9UP38 647 aa16.21■□□□□ 0.19
DDX41-215ENST00000512431 PPP2R3BQ9Y5P8 575 aa16.21■□□□□ 0.19
DDX41-215ENST00000512431 MYO1BO43795 1136 aa16.2■□□□□ 0.18
DDX41-215ENST00000512431 IGHMBP2P38935 993 aaKnown RBP16.2■□□□□ 0.18
DDX41-215ENST00000512431 GTF2IP78347 998 aa16.2■□□□□ 0.18
DDX41-215ENST00000512431 CRHR2Q13324 411 aa16.2■□□□□ 0.18
DDX41-215ENST00000512431 COLQQ9Y215 455 aaPredicted RBP16.2■□□□□ 0.18
DDX41-215ENST00000512431 IREB2P48200 963 aaKnown RBP16.19■□□□□ 0.18
DDX41-215ENST00000512431 TTLL11Q8NHH1 800 aa16.19■□□□□ 0.18
DDX41-215ENST00000512431 CLMNQ96JQ2 1002 aa16.19■□□□□ 0.18
DDX41-215ENST00000512431 ANKRD2Q9GZV1 360 aa16.19■□□□□ 0.18
DDX41-215ENST00000512431 GREM2Q9H772 168 aa16.19■□□□□ 0.18
DDX41-215ENST00000512431 MBIPQ9NS73 344 aa16.19■□□□□ 0.18
DDX41-215ENST00000512431 MKI67P46013 3256 aaKnown RBP16.19■□□□□ 0.18
DDX41-215ENST00000512431 ZNF804BA4D1E1 1349 aa16.19■□□□□ 0.18
DDX41-215ENST00000512431 KCNJ4P48050 445 aa16.18■□□□□ 0.18
DDX41-215ENST00000512431 WDR43Q15061 677 aaKnown RBP eCLIP16.18■□□□□ 0.18
DDX41-215ENST00000512431 RALBP1Q15311 655 aa16.18■□□□□ 0.18
DDX41-215ENST00000512431 SLC4A8Q2Y0W8 1093 aa16.18■□□□□ 0.18
DDX41-215ENST00000512431 TXNRD3Q86VQ6 643 aa16.18■□□□□ 0.18
DDX41-215ENST00000512431 ZBED3Q96IU2 234 aaPredicted RBP16.18■□□□□ 0.18
DDX41-215ENST00000512431 ELL2O00472 640 aaPredicted RBP16.17■□□□□ 0.18
DDX41-215ENST00000512431 NEXNQ0ZGT2 675 aa16.17■□□□□ 0.18
DDX41-215ENST00000512431 SLC9C1Q4G0N8 1177 aa16.17■□□□□ 0.18
DDX41-215ENST00000512431 ANKRD13AQ8IZ07 590 aa16.17■□□□□ 0.18
DDX41-215ENST00000512431 MPHOSPH8Q99549 860 aa16.17■□□□□ 0.18
DDX41-215ENST00000512431 MTMR14Q8NCE2 650 aa16.16■□□□□ 0.18
DDX41-215ENST00000512431 ZNF333Q96JL9 665 aa16.16■□□□□ 0.18
DDX41-215ENST00000512431 MAP3K2Q9Y2U5 619 aa16.16■□□□□ 0.18
DDX41-215ENST00000512431 HTTP42858 3142 aa16.15■□□□□ 0.18
DDX41-215ENST00000512431 CCDC30Q5VVM6 783 aa16.15■□□□□ 0.18
DDX41-215ENST00000512431 VEZTQ9HBM0 779 aa16.15■□□□□ 0.18
DDX41-215ENST00000512431 CD209Q9NNX6 404 aa16.15■□□□□ 0.18
DDX41-215ENST00000512431 RBBP6Q7Z6E9 1792 aaKnown RBP16.15■□□□□ 0.18
DDX41-215ENST00000512431 CLRN2A0PK11 232 aa16.14■□□□□ 0.17
DDX41-215ENST00000512431 TESPA1A2RU30 521 aaPredicted RBP16.14■□□□□ 0.17
DDX41-215ENST00000512431 USP2O75604 605 aaPredicted RBP16.14■□□□□ 0.17
DDX41-215ENST00000512431 WDHD1O75717 1129 aaPredicted RBP16.14■□□□□ 0.17
DDX41-215ENST00000512431 GNAI1P63096 354 aa16.14■□□□□ 0.17
DDX41-215ENST00000512431 CALD1Q05682 793 aaKnown RBP16.14■□□□□ 0.17
DDX41-215ENST00000512431 NBPF12Q5TAG4 269 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms