RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 AOX1Q06278 1338 aa8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 ETF1P62495 437 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 TERF2Q15554 542 aa8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 ICE2Q659A1 982 aa8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 Q6ZUG5 572 aa8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 MCM10Q7L590 875 aa8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 IFT81Q8WYA0 676 aa8.28□□□□□ -1.08
UBE2D3-224ENST00000508474 BICDL2A1A5D9 508 aa8.27□□□□□ -1.08
UBE2D3-224ENST00000508474 IDEP14735 1019 aa8.27□□□□□ -1.08
UBE2D3-224ENST00000508474 NLRP5P59047 1200 aa8.27□□□□□ -1.08
UBE2D3-224ENST00000508474 MXRA7P84157 204 aa8.27□□□□□ -1.08
UBE2D3-224ENST00000508474 C8orf74Q6P047 294 aa8.27□□□□□ -1.08
UBE2D3-224ENST00000508474 CCDC26Q8TAB7 109 aa8.27□□□□□ -1.08
UBE2D3-224ENST00000508474 RABGGTAQ92696 567 aa8.27□□□□□ -1.08
UBE2D3-224ENST00000508474 NAP1L3Q99457 506 aaPredicted RBP8.27□□□□□ -1.08
UBE2D3-224ENST00000508474 ALG1Q9BT22 464 aa8.27□□□□□ -1.08
UBE2D3-224ENST00000508474 HOMER2Q9NSB8 354 aa8.27□□□□□ -1.08
UBE2D3-224ENST00000508474 IKBKGQ9Y6K9 419 aa8.27□□□□□ -1.08
UBE2D3-224ENST00000508474 IDH1O75874 414 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 NLRP12P59046 1061 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 IKQ13123 557 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 NEDD9Q14511 834 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 FCHSD1Q86WN1 690 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 IQCA1Q86XH1 822 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 LLPHQ9BRT6 129 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 ANTXR1Q9H6X2 564 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 MRVI1Q9Y6F6 885 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 PRG4Q92954 1404 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 NOL3O60936 208 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 ZBTB16Q05516 673 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 PAK2Q13177 524 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 MTMR3Q13615 1198 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 ZNF287Q9HBT7 754 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 SLC52A1Q9NWF4 448 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 KLF18A0A0U1RQI7 1052 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 GADD45BO75293 160 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 PPP1R2P41236 205 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 EVA1CP58658 441 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 UBXN1Q04323 297 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 SNCBQ16143 134 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 MCTP2Q6DN12 878 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 CEP85Q6P2H3 762 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 CATIPQ7Z7H3 387 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 IGSF22Q8N9C0 903 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 CCDC51Q96ER9 411 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 STRN4Q9NRL3 753 aa8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 SEC63Q9UGP8 760 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-224ENST00000508474 CIB2O75838 187 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 APBA1Q02410 837 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 TSHZ3Q63HK5 1081 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 LRRC8AQ8IWT6 810 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 NLRP2Q9NX02 1062 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 TSKSQ9UJT2 592 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 FAM135AQ9P2D6 1515 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 TTF1Q15361 905 aaPredicted RBP8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 TMEM67Q5HYA8 995 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 CREB3L3Q68CJ9 461 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 CEP128Q6ZU80 1094 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 TMTC2Q8N394 836 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 CCDC110Q8TBZ0 833 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 MEIS3Q99687 375 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 NKIRAS1Q9NYS0 192 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 EIF2AK4Q9P2K8 1649 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 ATP2A1O14983 1001 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 KIF1CO43896 1103 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 BRD2P25440 801 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 CCDC174Q6PII3 467 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 MICAL1Q8TDZ2 1067 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 LEO1Q8WVC0 666 aaPredicted RBP8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 SREK1Q8WXA9 508 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 SPAG5Q96R06 1193 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 CAPS2Q9BXY5 557 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 IQCGQ9H095 443 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 VIMP08670 466 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 TATP17735 454 aaPredicted RBP8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 MAGEA9P43362 315 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 GNGT1P63211 74 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 RRS1Q15050 365 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 C16orf71Q8IYS4 520 aaPredicted RBP8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 ABTB2Q8N961 1025 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 MLKLQ8NB16 471 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 SMARCC2Q8TAQ2 1214 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 UBLCP1Q8WVY7 318 aaPredicted RBP8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 SLC26A6Q9BXS9 759 aa8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 DBF4Q9UBU7 674 aaPredicted RBP8.26□□□□□ -1.09
UBE2D3-224ENST00000508474 AFMP43652 599 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 LIG3P49916 1009 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 MAP3K12Q12852 859 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 MCMDC2Q4G0Z9 681 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 PNMA8AQ86V59 439 aaPredicted RBP8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 ARHGAP24Q8N264 748 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 RNF10Q8N5U6 811 aaKnown RBP8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 GPT2Q8TD30 523 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 VCX3BQ9H321 246 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 PLCB1Q9NQ66 1216 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 SSH2Q76I76 1423 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 NBPF7P0C2Y1 421 aaPredicted RBP8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 MARCKSP29966 332 aaPredicted RBP8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 HPDP32754 393 aaPredicted RBP8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 STAT6P42226 847 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms