RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 GPRC5DQ9NZD1 345 aa24.08■■□□□ 1.45
LMNA-221ENST00000506981 FBXO3Q9UK99 471 aa24.08■■□□□ 1.45
LMNA-221ENST00000506981 ADAMTSL1Q8N6G6 1762 aa24.08■■□□□ 1.44
LMNA-221ENST00000506981 SRGAP3O43295 1099 aa24.07■■□□□ 1.44
LMNA-221ENST00000506981 RPS12P25398 132 aaKnown RBP24.07■■□□□ 1.44
LMNA-221ENST00000506981 KLRK1P26718 216 aa24.07■■□□□ 1.44
LMNA-221ENST00000506981 PTPN12Q05209 780 aaKnown RBP24.07■■□□□ 1.44
LMNA-221ENST00000506981 C15orf52Q6ZUT6 534 aaKnown RBP24.07■■□□□ 1.44
LMNA-221ENST00000506981 TXNRD3Q86VQ6 643 aa24.07■■□□□ 1.44
LMNA-221ENST00000506981 FBXW7Q969H0 707 aa24.07■■□□□ 1.44
LMNA-221ENST00000506981 SNAP23O00161 211 aa24.06■■□□□ 1.44
LMNA-221ENST00000506981 MTX1Q13505 466 aa24.06■■□□□ 1.44
LMNA-221ENST00000506981 LDHDQ86WU2 507 aa24.06■■□□□ 1.44
LMNA-221ENST00000506981 SIL1Q9H173 461 aa24.06■■□□□ 1.44
LMNA-221ENST00000506981 KCNQ5Q9NR82 932 aa24.06■■□□□ 1.44
LMNA-221ENST00000506981 CLEC11AQ9Y240 323 aa24.06■■□□□ 1.44
LMNA-221ENST00000506981 USP17L3A6NCW0 530 aa24.05■■□□□ 1.44
LMNA-221ENST00000506981 USP17L4A6NCW7 530 aa24.05■■□□□ 1.44
LMNA-221ENST00000506981 CIAO1O76071 339 aa24.05■■□□□ 1.44
LMNA-221ENST00000506981 EPS15P42566 896 aa24.05■■□□□ 1.44
LMNA-221ENST00000506981 USP17L1Q7RTZ2 530 aa24.05■■□□□ 1.44
LMNA-221ENST00000506981 ADARB2Q9NS39 739 aaKnown RBP24.05■■□□□ 1.44
LMNA-221ENST00000506981 ZBTB12Q9Y330 459 aaPredicted RBP24.05■■□□□ 1.44
LMNA-221ENST00000506981 H7C1D1 291 aa24.04■■□□□ 1.44
LMNA-221ENST00000506981 PDE8BO95263 885 aa24.04■■□□□ 1.44
LMNA-221ENST00000506981 VIL1P09327 827 aaKnown RBP24.04■■□□□ 1.44
LMNA-221ENST00000506981 CHADLQ6NUI6 762 aa24.04■■□□□ 1.44
LMNA-221ENST00000506981 DPF2Q92785 391 aa24.04■■□□□ 1.44
LMNA-221ENST00000506981 CNOT7Q9UIV1 285 aaKnown RBP24.04■■□□□ 1.44
LMNA-221ENST00000506981 RSBN1LQ6PCB5 846 aaPredicted RBP24.03■■□□□ 1.44
LMNA-221ENST00000506981 USP50Q70EL3 339 aaPredicted RBP24.03■■□□□ 1.44
LMNA-221ENST00000506981 MICALL2Q8IY33 904 aa24.03■■□□□ 1.44
LMNA-221ENST00000506981 CD209Q9NNX6 404 aa24.03■■□□□ 1.44
LMNA-221ENST00000506981 COPRSQ9NQ92 184 aa24.03■■□□□ 1.44
LMNA-221ENST00000506981 ZNF609O15014 1411 aa24.02■■□□□ 1.44
LMNA-221ENST00000506981 ARAP2Q8WZ64 1704 aa24.02■■□□□ 1.44
LMNA-221ENST00000506981 ZBTB7BO15156 539 aaPredicted RBP24.02■■□□□ 1.44
LMNA-221ENST00000506981 MVPQ14764 893 aaKnown RBP24.02■■□□□ 1.44
LMNA-221ENST00000506981 PUM3Q15397 648 aaKnown RBP24.02■■□□□ 1.44
LMNA-221ENST00000506981 CHMP4BQ9H444 224 aaKnown RBP24.02■■□□□ 1.44
LMNA-221ENST00000506981 DDX19BQ9UMR2 479 aa24.02■■□□□ 1.44
LMNA-221ENST00000506981 PA2G4Q9UQ80 394 aaKnown RBP24.02■■□□□ 1.44
LMNA-221ENST00000506981 IRS2Q9Y4H2 1338 aa24.02■■□□□ 1.44
LMNA-221ENST00000506981 IFIT1P09914 478 aaKnown RBP24.01■■□□□ 1.43
LMNA-221ENST00000506981 POTEIP0CG38 1075 aa24.01■■□□□ 1.43
LMNA-221ENST00000506981 POTEJP0CG39 1038 aa24.01■■□□□ 1.43
LMNA-221ENST00000506981 IL15P40933 162 aaPredicted RBP24.01■■□□□ 1.43
LMNA-221ENST00000506981 VPS37DQ86XT2 251 aa24.01■■□□□ 1.43
LMNA-221ENST00000506981 VGLL2Q8N8G2 317 aa24.01■■□□□ 1.43
LMNA-221ENST00000506981 AGBL3Q8NEM8 1001 aa24.01■■□□□ 1.43
LMNA-221ENST00000506981 C1orf115Q9H7X2 142 aa24.01■■□□□ 1.43
LMNA-221ENST00000506981 CEP126Q9P2H0 1117 aa24.01■■□□□ 1.43
LMNA-221ENST00000506981 COG6Q9Y2V7 657 aa24.01■■□□□ 1.43
LMNA-221ENST00000506981 MYO3BQ8WXR4 1341 aa24.01■■□□□ 1.43
LMNA-221ENST00000506981 CAVIN4Q5BKX8 364 aa24■■□□□ 1.43
LMNA-221ENST00000506981 STRIP1Q5VSL9 837 aa24■■□□□ 1.43
LMNA-221ENST00000506981 ATG9AQ7Z3C6 839 aa24■■□□□ 1.43
LMNA-221ENST00000506981 POLR2AP24928 1970 aaKnown RBP24■■□□□ 1.43
LMNA-221ENST00000506981 SLC5A1P13866 664 aa23.99■■□□□ 1.43
LMNA-221ENST00000506981 HSPA6P17066 643 aa23.99■■□□□ 1.43
LMNA-221ENST00000506981 HIBADHP31937 336 aaKnown RBP23.99■■□□□ 1.43
LMNA-221ENST00000506981 PDE3AQ14432 1141 aa23.99■■□□□ 1.43
LMNA-221ENST00000506981 TTLL5Q6EMB2 1281 aa23.99■■□□□ 1.43
LMNA-221ENST00000506981 TRPM7Q96QT4 1865 aa23.98■■□□□ 1.43
LMNA-221ENST00000506981 PNMA6EA0A0J9YXQ4 647 aa23.98■■□□□ 1.43
LMNA-221ENST00000506981 IL1R1P14778 569 aa23.98■■□□□ 1.43
LMNA-221ENST00000506981 GYG1P46976 350 aa23.98■■□□□ 1.43
LMNA-221ENST00000506981 GTF2IP78347 998 aa23.98■■□□□ 1.43
LMNA-221ENST00000506981 ATP8B2P98198 1209 aa23.97■■□□□ 1.43
LMNA-221ENST00000506981 DACT2Q5SW24 774 aa23.97■■□□□ 1.43
LMNA-221ENST00000506981 LPIN2Q92539 896 aa23.97■■□□□ 1.43
LMNA-221ENST00000506981 SHTN1A0MZ66 631 aa23.96■■□□□ 1.43
LMNA-221ENST00000506981 G3BP1Q13283 466 aaKnown RBP eCLIP23.96■■□□□ 1.431e-10■■□□□ 11.5
LMNA-221ENST00000506981 ATP2B3Q16720 1220 aa23.96■■□□□ 1.43
LMNA-221ENST00000506981 FAM84BQ96KN1 310 aaPredicted RBP23.96■■□□□ 1.43
LMNA-221ENST00000506981 FRAT2O75474 233 aaPredicted RBP23.95■■□□□ 1.42
LMNA-221ENST00000506981 USP17L8P0C7I0 530 aa23.95■■□□□ 1.42
LMNA-221ENST00000506981 FGFR2P21802 821 aa23.95■■□□□ 1.42
LMNA-221ENST00000506981 ECM29Q5VYK3 1845 aa23.95■■□□□ 1.42
LMNA-221ENST00000506981 APLP1P51693 650 aa23.94■■□□□ 1.42
LMNA-221ENST00000506981 OS9Q13438 667 aaPredicted RBP23.94■■□□□ 1.42
LMNA-221ENST00000506981 KIF4BQ2VIQ3 1234 aa23.94■■□□□ 1.42
LMNA-221ENST00000506981 TBC1D10BQ4KMP7 808 aaPredicted RBP23.94■■□□□ 1.42
LMNA-221ENST00000506981 MAP1SQ66K74 1059 aaPredicted RBP23.94■■□□□ 1.42
LMNA-221ENST00000506981 SAMD7Q7Z3H4 446 aa23.94■■□□□ 1.42
LMNA-221ENST00000506981 OGFOD1Q8N543 542 aa23.94■■□□□ 1.42
LMNA-221ENST00000506981 TRPM4Q8TD43 1214 aa23.94■■□□□ 1.42
LMNA-221ENST00000506981 SSH3Q8TE77 659 aa23.94■■□□□ 1.42
LMNA-221ENST00000506981 POLA2Q14181 598 aa23.93■■□□□ 1.42
LMNA-221ENST00000506981 RBM26Q5T8P6 1007 aaKnown RBP23.93■■□□□ 1.42
LMNA-221ENST00000506981 TDRD7Q8NHU6 1098 aaKnown RBP23.93■■□□□ 1.42
LMNA-221ENST00000506981 GMLQ99445 158 aa23.93■■□□□ 1.42
LMNA-221ENST00000506981 MXD3Q9BW11 206 aa23.93■■□□□ 1.42
LMNA-221ENST00000506981 HDAC9Q9UKV0 1011 aa23.93■■□□□ 1.42
LMNA-221ENST00000506981 AKAP2Q9Y2D5 859 aa23.93■■□□□ 1.42
LMNA-221ENST00000506981 SASH1O94885 1247 aa23.92■■□□□ 1.42
LMNA-221ENST00000506981 ZNF280AP59817 542 aaPredicted RBP23.92■■□□□ 1.42
LMNA-221ENST00000506981 C20orf194Q5TEA3 1177 aa23.92■■□□□ 1.42
LMNA-221ENST00000506981 CEP85Q6P2H3 762 aa23.92■■□□□ 1.42
LMNA-221ENST00000506981 FBXO33Q7Z6M2 555 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms