RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 VIRMAQ69YN4 1812 aaKnown RBP9.02□□□□□ -0.97
ATP2C1-208ENST00000504948 SHTN1A0MZ66 631 aa9.02□□□□□ -0.97
ATP2C1-208ENST00000504948 WDHD1O75717 1129 aaPredicted RBP9.02□□□□□ -0.97
ATP2C1-208ENST00000504948 KCNA6P17658 529 aa9.02□□□□□ -0.97
ATP2C1-208ENST00000504948 GBP2P32456 591 aaPredicted RBP9.02□□□□□ -0.97
ATP2C1-208ENST00000504948 CLCN6P51797 869 aa9.02□□□□□ -0.97
ATP2C1-208ENST00000504948 TAF7Q15545 349 aaPredicted RBP9.02□□□□□ -0.97
ATP2C1-208ENST00000504948 NME9Q86XW9 330 aa9.02□□□□□ -0.97
ATP2C1-208ENST00000504948 EDC3Q96F86 508 aaKnown RBP9.02□□□□□ -0.97
ATP2C1-208ENST00000504948 PDE11AQ9HCR9 933 aa9.02□□□□□ -0.97
ATP2C1-208ENST00000504948 SAMM50Q9Y512 469 aa9.02□□□□□ -0.97
ATP2C1-208ENST00000504948 ZPR1O75312 459 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 NBPF7P0C2Y1 421 aaPredicted RBP9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 CTNNA3Q9UI47 895 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 CFAP45Q9UL16 551 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 RRP15Q9Y3B9 282 aaKnown RBP9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 ATP7BP35670 1465 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 A0A1B0GUL7 405 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 ADKP55263 362 aaKnown RBP9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 STX1AQ16623 288 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 ZNF569Q5MCW4 686 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 CCDC181Q5TID7 509 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 VPS53Q5VIR6 699 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 NUP133Q8WUM0 1156 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 SMARCE1Q969G3 411 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 AK9Q5TCS8 1911 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 FOXO3O43524 673 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 KIF5CO60282 957 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 PPP1R42Q7Z4L9 355 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 WAPLQ7Z5K2 1190 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 JADE2Q9NQC1 790 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 LTN1O94822 1766 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 ADAMTS7Q9UKP4 1686 aa9.01□□□□□ -0.97
ATP2C1-208ENST00000504948 CCDC171Q6TFL3 1326 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 SMIM23A6NLE4 172 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 E2F5Q15329 346 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 PTPROQ16827 1216 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 GBP6Q6ZN66 633 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 KIAA1328Q86T90 577 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 TRMT44Q8IYL2 757 aaKnown RBP9□□□□□ -0.97
ATP2C1-208ENST00000504948 DDX19AQ9NUU7 478 aaKnown RBP9□□□□□ -0.97
ATP2C1-208ENST00000504948 PAPPAQ13219 1627 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 AFMP43652 599 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 NFE2L2Q16236 605 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 CCDC144BQ3MJ40 725 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 KCNF1Q9H3M0 494 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 GUCA1BQ9UMX6 200 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 WDR3Q9UNX4 943 aaKnown RBP eCLIP9□□□□□ -0.97
ATP2C1-208ENST00000504948 JRKLQ9Y4A0 524 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 NUP188Q5SRE5 1749 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 LARGE1O95461 756 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 CHMLP26374 656 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 MAP2K2P36507 400 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 DDX46Q7L014 1031 aaKnown RBP9□□□□□ -0.97
ATP2C1-208ENST00000504948 RIC3Q7Z5B4 369 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 TACO1Q9BSH4 297 aaKnown RBP9□□□□□ -0.97
ATP2C1-208ENST00000504948 MAPK8IP1Q9UQF2 711 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 ZBTB12Q9Y330 459 aaPredicted RBP9□□□□□ -0.97
ATP2C1-208ENST00000504948 CSB-PGBD3P0DP91 1061 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 HPDP32754 393 aaPredicted RBP9□□□□□ -0.97
ATP2C1-208ENST00000504948 XPO4Q9C0E2 1151 aaKnown RBP9□□□□□ -0.97
ATP2C1-208ENST00000504948 RBM8AQ9Y5S9 174 aaKnown RBP9□□□□□ -0.97
ATP2C1-208ENST00000504948 NINLQ9Y2I6 1382 aa9□□□□□ -0.97
ATP2C1-208ENST00000504948 VAMP4O75379 141 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 ATP1A2P50993 1020 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 CEP85Q6P2H3 762 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 RASEFQ8IZ41 740 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 KLHDC4Q8TBB5 520 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 PDLIM2Q96JY6 352 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 ZNF396Q96N95 335 aaPredicted RBP8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 KIF2CQ99661 725 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 SERPINA10Q9UK55 444 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 C1orf167Q5SNV9 1468 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 RGPD5Q99666 1765 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 NF2P35240 595 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 TRDNQ13061 729 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 HLTFQ14527 1009 aaKnown RBP eCLIP8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 SLC4A8Q2Y0W8 1093 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 SAMD1Q6SPF0 538 aaPredicted RBP8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 CCDC129Q6ZRS4 1044 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 CNPY4Q8N129 248 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 STAMQ92783 540 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 NUP88Q99567 741 aaPredicted RBP8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 DDX41Q9UJV9 622 aaKnown RBP8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 CASZ1Q86V15 1759 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 PNMA6EA0A0J9YXQ4 647 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 JPH2Q9BR39 696 aaPredicted RBP8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 HYPKQ9NX55 129 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 LRRC37A3O60309 1634 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 GOLGA6L7A0A1B0GV03 622 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 ZNF827Q17R98 1081 aa8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 CPLX2Q6PUV4 134 aaKnown RBP8.99□□□□□ -0.97
ATP2C1-208ENST00000504948 PKD1L3Q7Z443 1732 aa8.98□□□□□ -0.97
ATP2C1-208ENST00000504948 ZSCAN12O43309 604 aa8.98□□□□□ -0.97
ATP2C1-208ENST00000504948 CCT5P48643 541 aa8.98□□□□□ -0.97
ATP2C1-208ENST00000504948 KIRREL3Q8IZU9 778 aa8.98□□□□□ -0.97
ATP2C1-208ENST00000504948 RGS22Q8NE09 1264 aa8.98□□□□□ -0.97
ATP2C1-208ENST00000504948 FAN1Q9Y2M0 1017 aa8.98□□□□□ -0.97
ATP2C1-208ENST00000504948 EBAG9O00559 213 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms