RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 SNAP23O00161 211 aa14.97□□□□□ -0.01
CSNK1E-213ENST00000495232 RAD17O75943 681 aa14.97□□□□□ -0.01
CSNK1E-213ENST00000495232 IFIT1P09914 478 aaKnown RBP14.97□□□□□ -0.01
CSNK1E-213ENST00000495232 CXCL9Q07325 125 aa14.97□□□□□ -0.01
CSNK1E-213ENST00000495232 POLA2Q14181 598 aa14.97□□□□□ -0.01
CSNK1E-213ENST00000495232 PUM3Q15397 648 aaKnown RBP14.97□□□□□ -0.01
CSNK1E-213ENST00000495232 VPS37DQ86XT2 251 aa14.97□□□□□ -0.01
CSNK1E-213ENST00000495232 RRAGCQ9HB90 399 aa14.97□□□□□ -0.01
CSNK1E-213ENST00000495232 YDJCA8MPS7 323 aa14.96□□□□□ -0.01
CSNK1E-213ENST00000495232 SURF6O75683 361 aaKnown RBP14.96□□□□□ -0.01
CSNK1E-213ENST00000495232 SLC5A1P13866 664 aa14.96□□□□□ -0.01
CSNK1E-213ENST00000495232 CAVIN4Q5BKX8 364 aa14.96□□□□□ -0.01
CSNK1E-213ENST00000495232 C15orf52Q6ZUT6 534 aaKnown RBP14.96□□□□□ -0.01
CSNK1E-213ENST00000495232 C16orf71Q8IYS4 520 aaPredicted RBP14.96□□□□□ -0.01
CSNK1E-213ENST00000495232 VGLL2Q8N8G2 317 aa14.96□□□□□ -0.01
CSNK1E-213ENST00000495232 FBXW7Q969H0 707 aa14.96□□□□□ -0.01
CSNK1E-213ENST00000495232 IQCA1LA6NCM1 817 aa14.95□□□□□ -0.02
CSNK1E-213ENST00000495232 VEGFAP15692 232 aaPredicted RBP14.95□□□□□ -0.02
CSNK1E-213ENST00000495232 KLRK1P26718 216 aa14.95□□□□□ -0.02
CSNK1E-213ENST00000495232 LMOD1P29536 600 aaPredicted RBP14.95□□□□□ -0.02
CSNK1E-213ENST00000495232 HIBADHP31937 336 aaKnown RBP14.95□□□□□ -0.02
CSNK1E-213ENST00000495232 TXNRD3Q86VQ6 643 aa14.95□□□□□ -0.02
CSNK1E-213ENST00000495232 LPIN2Q92539 896 aa14.95□□□□□ -0.02
CSNK1E-213ENST00000495232 CRBNQ96SW2 442 aa14.95□□□□□ -0.02
CSNK1E-213ENST00000495232 NMRK2Q9NPI5 230 aa14.95□□□□□ -0.02
CSNK1E-213ENST00000495232 AKAP2Q9Y2D5 859 aa14.95□□□□□ -0.02
CSNK1E-213ENST00000495232 FRAT2O75474 233 aaPredicted RBP14.94□□□□□ -0.02
CSNK1E-213ENST00000495232 TFCP2Q12800 502 aa14.94□□□□□ -0.02
CSNK1E-213ENST00000495232 ATP2B3Q16720 1220 aa14.94□□□□□ -0.02
CSNK1E-213ENST00000495232 HSP90AB4PQ58FF6 505 aa14.94□□□□□ -0.02
CSNK1E-213ENST00000495232 CD209Q9NNX6 404 aa14.94□□□□□ -0.02
CSNK1E-213ENST00000495232 WDR90Q96KV7 1748 aa14.93□□□□□ -0.02
CSNK1E-213ENST00000495232 USP17L3A6NCW0 530 aa14.93□□□□□ -0.02
CSNK1E-213ENST00000495232 USP17L4A6NCW7 530 aa14.93□□□□□ -0.02
CSNK1E-213ENST00000495232 PSMD14O00487 310 aa14.93□□□□□ -0.02
CSNK1E-213ENST00000495232 GYG1P46976 350 aa14.93□□□□□ -0.02
CSNK1E-213ENST00000495232 USP17L1Q7RTZ2 530 aa14.93□□□□□ -0.02
CSNK1E-213ENST00000495232 ERC1Q8IUD2 1116 aa14.93□□□□□ -0.02
CSNK1E-213ENST00000495232 L3MBTL3Q96JM7 780 aaPredicted RBP14.93□□□□□ -0.02
CSNK1E-213ENST00000495232 KCNQ5Q9NR82 932 aa14.93□□□□□ -0.02
CSNK1E-213ENST00000495232 HACL1Q9UJ83 578 aa14.93□□□□□ -0.02
CSNK1E-213ENST00000495232 FGFR2P21802 821 aa14.92□□□□□ -0.02
CSNK1E-213ENST00000495232 AAMPQ13685 434 aa14.92□□□□□ -0.02
CSNK1E-213ENST00000495232 TTLL5Q6EMB2 1281 aa14.92□□□□□ -0.02
CSNK1E-213ENST00000495232 FAM84BQ96KN1 310 aaPredicted RBP14.92□□□□□ -0.02
CSNK1E-213ENST00000495232 NEUROD6Q96NK8 337 aa14.92□□□□□ -0.02
CSNK1E-213ENST00000495232 NOP58Q9Y2X3 529 aaKnown RBP14.92□□□□□ -0.02
CSNK1E-213ENST00000495232 IRS2Q9Y4H2 1338 aa14.92□□□□□ -0.02
CSNK1E-213ENST00000495232 VIL1P09327 827 aaKnown RBP14.91□□□□□ -0.02
CSNK1E-213ENST00000495232 IL1R1P14778 569 aa14.91□□□□□ -0.02
CSNK1E-213ENST00000495232 RPS12P25398 132 aaKnown RBP14.91□□□□□ -0.02
CSNK1E-213ENST00000495232 GMPSP49915 693 aaPredicted RBP14.91□□□□□ -0.02
CSNK1E-213ENST00000495232 GTF2IP78347 998 aa14.91□□□□□ -0.02
CSNK1E-213ENST00000495232 STRIP1Q5VSL9 837 aa14.91□□□□□ -0.02
CSNK1E-213ENST00000495232 GNL3LQ9NVN8 582 aaKnown RBP14.91□□□□□ -0.02
CSNK1E-213ENST00000495232 EXOC6BQ9Y2D4 811 aa14.91□□□□□ -0.02
CSNK1E-213ENST00000495232 SCN4AP35499 1836 aa14.91□□□□□ -0.02
CSNK1E-213ENST00000495232 A0A1B0GUL7 405 aa14.9□□□□□ -0.02
CSNK1E-213ENST00000495232 H7C1D1 291 aa14.9□□□□□ -0.02
CSNK1E-213ENST00000495232 SASH1O94885 1247 aa14.9□□□□□ -0.02
CSNK1E-213ENST00000495232 EPHX2P34913 555 aa14.9□□□□□ -0.02
CSNK1E-213ENST00000495232 BCAMP50895 628 aa14.9□□□□□ -0.02
CSNK1E-213ENST00000495232 TIMM10P62072 90 aa14.9□□□□□ -0.02
CSNK1E-213ENST00000495232 GORABQ5T7V8 394 aa14.9□□□□□ -0.02
CSNK1E-213ENST00000495232 RSBN1LQ6PCB5 846 aaPredicted RBP14.9□□□□□ -0.02
CSNK1E-213ENST00000495232 FBXO33Q7Z6M2 555 aa14.9□□□□□ -0.02
CSNK1E-213ENST00000495232 SIRT2Q8IXJ6 389 aa14.9□□□□□ -0.02
CSNK1E-213ENST00000495232 ZBTB12Q9Y330 459 aaPredicted RBP14.9□□□□□ -0.02
CSNK1E-213ENST00000495232 MYO3BQ8WXR4 1341 aa14.9□□□□□ -0.02
CSNK1E-213ENST00000495232 SCN9AQ15858 1988 aa14.89□□□□□ -0.03
CSNK1E-213ENST00000495232 SCNN1DP51172 638 aa14.89□□□□□ -0.03
CSNK1E-213ENST00000495232 EAPPQ56P03 285 aaPredicted RBP14.89□□□□□ -0.03
CSNK1E-213ENST00000495232 PNMA8AQ86V59 439 aaPredicted RBP14.89□□□□□ -0.03
CSNK1E-213ENST00000495232 AGBL3Q8NEM8 1001 aa14.89□□□□□ -0.03
CSNK1E-213ENST00000495232 DPF2Q92785 391 aa14.89□□□□□ -0.03
CSNK1E-213ENST00000495232 TAF1DQ9H5J8 278 aaPredicted RBP14.89□□□□□ -0.03
CSNK1E-213ENST00000495232 GPRC5DQ9NZD1 345 aa14.89□□□□□ -0.03
CSNK1E-213ENST00000495232 CNOT7Q9UIV1 285 aaKnown RBP14.89□□□□□ -0.03
CSNK1E-213ENST00000495232 PSME4Q14997 1843 aa14.89□□□□□ -0.03
CSNK1E-213ENST00000495232 POTECB2RU33 542 aa14.88□□□□□ -0.03
CSNK1E-213ENST00000495232 APBB1O00213 710 aa14.88□□□□□ -0.03
CSNK1E-213ENST00000495232 KIF3CO14782 793 aa14.88□□□□□ -0.03
CSNK1E-213ENST00000495232 RAB11FIP3O75154 756 aa14.88□□□□□ -0.03
CSNK1E-213ENST00000495232 CENPBP07199 599 aaPredicted RBP14.88□□□□□ -0.03
CSNK1E-213ENST00000495232 DACT2Q5SW24 774 aa14.88□□□□□ -0.03
CSNK1E-213ENST00000495232 OGFOD1Q8N543 542 aa14.88□□□□□ -0.03
CSNK1E-213ENST00000495232 TDRD7Q8NHU6 1098 aaKnown RBP14.88□□□□□ -0.03
CSNK1E-213ENST00000495232 XAGE2Q96GT9 111 aa14.88□□□□□ -0.03
CSNK1E-213ENST00000495232 GPR108Q9NPR9 543 aa14.88□□□□□ -0.03
CSNK1E-213ENST00000495232 ADARB2Q9NS39 739 aaKnown RBP14.88□□□□□ -0.03
CSNK1E-213ENST00000495232 IQSEC3Q9UPP2 1182 aaPredicted RBP14.88□□□□□ -0.03
CSNK1E-213ENST00000495232 TOMM70O94826 608 aa14.87□□□□□ -0.03
CSNK1E-213ENST00000495232 EPS15P42566 896 aa14.87□□□□□ -0.03
CSNK1E-213ENST00000495232 CHAF1AQ13111 956 aaPredicted RBP14.87□□□□□ -0.03
CSNK1E-213ENST00000495232 TNNI3KQ59H18 835 aa14.87□□□□□ -0.03
CSNK1E-213ENST00000495232 MICALL2Q8IY33 904 aa14.87□□□□□ -0.03
CSNK1E-213ENST00000495232 EXOC6Q8TAG9 804 aa14.87□□□□□ -0.03
CSNK1E-213ENST00000495232 KIF1BPQ96EK5 621 aa14.87□□□□□ -0.03
CSNK1E-213ENST00000495232 BCL11AQ9H165 835 aa14.87□□□□□ -0.03
CSNK1E-213ENST00000495232 HDAC9Q9UKV0 1011 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms