RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 HIRAP54198 1017 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-224ENST00000494132 RBM26Q5T8P6 1007 aaKnown RBP18.47■□□□□ 0.55
ATG4B-224ENST00000494132 CLUAP1Q96AJ1 413 aa18.47■□□□□ 0.55
ATG4B-224ENST00000494132 MXD3Q9BW11 206 aa18.47■□□□□ 0.55
ATG4B-224ENST00000494132 H7C1D1 291 aa18.46■□□□□ 0.55
ATG4B-224ENST00000494132 VIL1P09327 827 aaKnown RBP18.46■□□□□ 0.55
ATG4B-224ENST00000494132 UBTFL1P0CB47 393 aaPredicted RBP18.46■□□□□ 0.55
ATG4B-224ENST00000494132 TBC1D10BQ4KMP7 808 aaPredicted RBP18.46■□□□□ 0.55
ATG4B-224ENST00000494132 LRRC24Q50LG9 513 aa18.46■□□□□ 0.55
ATG4B-224ENST00000494132 PODNQ7Z5L7 613 aa18.46■□□□□ 0.55
ATG4B-224ENST00000494132 DNAJC5GQ8N7S2 189 aa18.46■□□□□ 0.55
ATG4B-224ENST00000494132 MEIS3Q99687 375 aa18.46■□□□□ 0.55
ATG4B-224ENST00000494132 RSBN1LQ6PCB5 846 aaPredicted RBP18.45■□□□□ 0.54
ATG4B-224ENST00000494132 DPF2Q92785 391 aa18.45■□□□□ 0.54
ATG4B-224ENST00000494132 LRRFIP2Q9Y608 721 aaKnown RBP18.45■□□□□ 0.54
ATG4B-224ENST00000494132 IRS2Q9Y4H2 1338 aa18.45■□□□□ 0.54
ATG4B-224ENST00000494132 USP17L3A6NCW0 530 aa18.44■□□□□ 0.54
ATG4B-224ENST00000494132 USP17L4A6NCW7 530 aa18.44■□□□□ 0.54
ATG4B-224ENST00000494132 TRAF5O00463 557 aa18.44■□□□□ 0.54
ATG4B-224ENST00000494132 RPS12P25398 132 aaKnown RBP18.44■□□□□ 0.54
ATG4B-224ENST00000494132 ATF7IPQ6VMQ6 1270 aa18.44■□□□□ 0.54
ATG4B-224ENST00000494132 USP17L1Q7RTZ2 530 aa18.44■□□□□ 0.54
ATG4B-224ENST00000494132 ARHGAP45Q92619 1136 aa18.44■□□□□ 0.54
ATG4B-224ENST00000494132 COA1Q9GZY4 146 aa18.44■□□□□ 0.54
ATG4B-224ENST00000494132 MYH13Q9UKX3 1938 aa18.44■□□□□ 0.54
ATG4B-224ENST00000494132 GLIS2Q9BZE0 524 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-224ENST00000494132 IPO8O15397 1037 aaKnown RBP18.42■□□□□ 0.54
ATG4B-224ENST00000494132 RFX5P48382 616 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-224ENST00000494132 INTS3Q68E01 1043 aaKnown RBP18.42■□□□□ 0.54
ATG4B-224ENST00000494132 DLK2Q6UY11 383 aa18.42■□□□□ 0.54
ATG4B-224ENST00000494132 KLRG1Q96E93 195 aa18.42■□□□□ 0.54
ATG4B-224ENST00000494132 CD209Q9NNX6 404 aa18.42■□□□□ 0.54
ATG4B-224ENST00000494132 JAG2Q9Y219 1238 aa18.42■□□□□ 0.54
ATG4B-224ENST00000494132 RIPOR2Q9Y4F9 1068 aa18.42■□□□□ 0.54
ATG4B-224ENST00000494132 GTF2IP78347 998 aa18.41■□□□□ 0.54
ATG4B-224ENST00000494132 KIF4BQ2VIQ3 1234 aa18.41■□□□□ 0.54
ATG4B-224ENST00000494132 METTL24Q5JXM2 366 aa18.41■□□□□ 0.54
ATG4B-224ENST00000494132 DACT2Q5SW24 774 aa18.41■□□□□ 0.54
ATG4B-224ENST00000494132 ZKSCAN2Q63HK3 967 aa18.41■□□□□ 0.54
ATG4B-224ENST00000494132 AGBL3Q8NEM8 1001 aa18.41■□□□□ 0.54
ATG4B-224ENST00000494132 MKRN1Q9UHC7 482 aaKnown RBP18.41■□□□□ 0.54
ATG4B-224ENST00000494132 ASTN2O75129 1339 aaPredicted RBP18.41■□□□□ 0.54
ATG4B-224ENST00000494132 GYG1P46976 350 aa18.4■□□□□ 0.54
ATG4B-224ENST00000494132 TTLL5Q6EMB2 1281 aa18.4■□□□□ 0.54
ATG4B-224ENST00000494132 TMEM57Q8N5G2 664 aa18.4■□□□□ 0.54
ATG4B-224ENST00000494132 GMLQ99445 158 aa18.4■□□□□ 0.54
ATG4B-224ENST00000494132 SIL1Q9H173 461 aa18.4■□□□□ 0.54
ATG4B-224ENST00000494132 CREBZFQ9NS37 354 aa18.4■□□□□ 0.54
ATG4B-224ENST00000494132 ZNF609O15014 1411 aa18.4■□□□□ 0.54
ATG4B-224ENST00000494132 TMEM88BA6NKF7 163 aa18.39■□□□□ 0.53
ATG4B-224ENST00000494132 USP17L8P0C7I0 530 aa18.39■□□□□ 0.53
ATG4B-224ENST00000494132 PTPN12Q05209 780 aaKnown RBP18.39■□□□□ 0.53
ATG4B-224ENST00000494132 STRIP1Q5VSL9 837 aa18.39■□□□□ 0.53
ATG4B-224ENST00000494132 ZNF804AQ7Z570 1209 aa18.39■□□□□ 0.53
ATG4B-224ENST00000494132 MROH5Q6ZUA9 1318 aa18.39■□□□□ 0.53
ATG4B-224ENST00000494132 ARAP2Q8WZ64 1704 aa18.38■□□□□ 0.53
ATG4B-224ENST00000494132 C15orf52Q6ZUT6 534 aaKnown RBP18.38■□□□□ 0.53
ATG4B-224ENST00000494132 ZNF408Q9H9D4 720 aa18.38■□□□□ 0.53
ATG4B-224ENST00000494132 PA2G4Q9UQ80 394 aaKnown RBP18.38■□□□□ 0.53
ATG4B-224ENST00000494132 ECM29Q5VYK3 1845 aa18.37■□□□□ 0.53
ATG4B-224ENST00000494132 EYA2O00167 538 aa18.37■□□□□ 0.53
ATG4B-224ENST00000494132 ZNF280AP59817 542 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-224ENST00000494132 UBE4AQ14139 1066 aa18.37■□□□□ 0.53
ATG4B-224ENST00000494132 USP48Q86UV5 1035 aa18.37■□□□□ 0.53
ATG4B-224ENST00000494132 KIAA0825Q8IV33 1275 aa18.37■□□□□ 0.53
ATG4B-224ENST00000494132 VGLL2Q8N8G2 317 aa18.37■□□□□ 0.53
ATG4B-224ENST00000494132 ZC3H15Q8WU90 426 aaKnown RBP18.37■□□□□ 0.53
ATG4B-224ENST00000494132 MYOZ2Q9NPC6 264 aa18.37■□□□□ 0.53
ATG4B-224ENST00000494132 GGA3Q9NZ52 723 aa18.37■□□□□ 0.53
ATG4B-224ENST00000494132 PGAP2Q9UHJ9 254 aa18.37■□□□□ 0.53
ATG4B-224ENST00000494132 SCAF8Q9UPN6 1271 aaKnown RBP18.37■□□□□ 0.53
ATG4B-224ENST00000494132 IQSEC3Q9UPP2 1182 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-224ENST00000494132 ADM5C9JUS6 153 aa18.36■□□□□ 0.53
ATG4B-224ENST00000494132 GNAI3P08754 354 aa18.36■□□□□ 0.53
ATG4B-224ENST00000494132 RLBP1P12271 317 aa18.36■□□□□ 0.53
ATG4B-224ENST00000494132 CERS5Q8N5B7 392 aa18.36■□□□□ 0.53
ATG4B-224ENST00000494132 FAM84BQ96KN1 310 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-224ENST00000494132 ABT1Q9ULW3 272 aaKnown RBP18.36■□□□□ 0.53
ATG4B-224ENST00000494132 MYO3BQ8WXR4 1341 aa18.35■□□□□ 0.53
ATG4B-224ENST00000494132 F8W031 263 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-224ENST00000494132 PDE8BO95263 885 aa18.35■□□□□ 0.53
ATG4B-224ENST00000494132 CELF2O95319 508 aaKnown RBP18.35■□□□□ 0.53
ATG4B-224ENST00000494132 IL1R1P14778 569 aa18.35■□□□□ 0.53
ATG4B-224ENST00000494132 SCARF1Q14162 830 aa18.35■□□□□ 0.53
ATG4B-224ENST00000494132 CST9Q5W186 159 aa18.35■□□□□ 0.53
ATG4B-224ENST00000494132 CDC37L1Q7L3B6 337 aa18.35■□□□□ 0.53
ATG4B-224ENST00000494132 ATG9AQ7Z3C6 839 aa18.35■□□□□ 0.53
ATG4B-224ENST00000494132 FTSJ3Q8IY81 847 aaKnown RBP18.35■□□□□ 0.53
ATG4B-224ENST00000494132 SASH1O94885 1247 aa18.34■□□□□ 0.53
ATG4B-224ENST00000494132 HIBADHP31937 336 aaKnown RBP18.34■□□□□ 0.53
ATG4B-224ENST00000494132 NBPF9Q3BBW0 867 aa18.34■□□□□ 0.53
ATG4B-224ENST00000494132 ANGEL2Q5VTE6 544 aaKnown RBP18.34■□□□□ 0.53
ATG4B-224ENST00000494132 KRT26Q7Z3Y9 468 aa18.34■□□□□ 0.53
ATG4B-224ENST00000494132 DZIP1LQ8IYY4 767 aaKnown RBP18.34■□□□□ 0.53
ATG4B-224ENST00000494132 DCPSQ96C86 337 aaKnown RBP18.34■□□□□ 0.53
ATG4B-224ENST00000494132 CNTNAP1P78357 1384 aa18.33■□□□□ 0.53
ATG4B-224ENST00000494132 SRGAP3O43295 1099 aa18.33■□□□□ 0.52
ATG4B-224ENST00000494132 ITPRIPQ8IWB1 547 aa18.33■□□□□ 0.52
ATG4B-224ENST00000494132 OGFOD1Q8N543 542 aa18.33■□□□□ 0.52
ATG4B-224ENST00000494132 C1orf115Q9H7X2 142 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms