RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 WDR33Q9C0J8 1336 aaKnown RBP22.82■■□□□ 1.24
HMGN1-219ENST00000491183 KIF4BQ2VIQ3 1234 aa22.81■■□□□ 1.24
HMGN1-219ENST00000491183 TRMT2AQ8IZ69 625 aaKnown RBP22.81■■□□□ 1.24
HMGN1-219ENST00000491183 COA1Q9GZY4 146 aa22.81■■□□□ 1.24
HMGN1-219ENST00000491183 CHMP3Q9Y3E7 222 aa22.81■■□□□ 1.24
HMGN1-219ENST00000491183 ZNF646O15015 1829 aaPredicted RBP22.8■■□□□ 1.24
HMGN1-219ENST00000491183 SNAP23O00161 211 aa22.8■■□□□ 1.24
HMGN1-219ENST00000491183 KAZALD1Q96I82 304 aa22.8■■□□□ 1.24
HMGN1-219ENST00000491183 ZNF594Q96JF6 807 aaPredicted RBP22.8■■□□□ 1.24
HMGN1-219ENST00000491183 ASTN2O75129 1339 aaPredicted RBP22.8■■□□□ 1.24
HMGN1-219ENST00000491183 TAF5LO75529 589 aa22.79■■□□□ 1.24
HMGN1-219ENST00000491183 NBPF7P0C2Y1 421 aaPredicted RBP22.79■■□□□ 1.24
HMGN1-219ENST00000491183 DACT2Q5SW24 774 aa22.79■■□□□ 1.24
HMGN1-219ENST00000491183 CYP4F22Q6NT55 531 aa22.79■■□□□ 1.24
HMGN1-219ENST00000491183 SAPCD2Q86UD0 394 aa22.79■■□□□ 1.24
HMGN1-219ENST00000491183 HELBQ8NG08 1087 aaPredicted RBP22.79■■□□□ 1.24
HMGN1-219ENST00000491183 SUCLG2Q96I99 432 aa22.79■■□□□ 1.24
HMGN1-219ENST00000491183 MXD3Q9BW11 206 aa22.79■■□□□ 1.24
HMGN1-219ENST00000491183 ZNF408Q9H9D4 720 aa22.79■■□□□ 1.24
HMGN1-219ENST00000491183 FOXN1O15353 648 aa22.78■■□□□ 1.24
HMGN1-219ENST00000491183 USP17L8P0C7I0 530 aa22.78■■□□□ 1.24
HMGN1-219ENST00000491183 KRT26Q7Z3Y9 468 aa22.78■■□□□ 1.24
HMGN1-219ENST00000491183 DCPSQ96C86 337 aaKnown RBP22.78■■□□□ 1.24
HMGN1-219ENST00000491183 CAPNS2Q96L46 248 aa22.78■■□□□ 1.24
HMGN1-219ENST00000491183 WBP1LQ9NX94 342 aa22.78■■□□□ 1.24
HMGN1-219ENST00000491183 A0A1B0GUL6 1792 aa22.78■■□□□ 1.24
HMGN1-219ENST00000491183 UTYO14607 1347 aa22.78■■□□□ 1.24
HMGN1-219ENST00000491183 IRS2Q9Y4H2 1338 aa22.78■■□□□ 1.24
HMGN1-219ENST00000491183 CCDC57Q2TAC2 916 aa22.77■■□□□ 1.24
HMGN1-219ENST00000491183 PTPRCP08575 1304 aa22.77■■□□□ 1.24
HMGN1-219ENST00000491183 ADM5C9JUS6 153 aa22.76■■□□□ 1.23
HMGN1-219ENST00000491183 STRIP1Q5VSL9 837 aa22.76■■□□□ 1.23
HMGN1-219ENST00000491183 PAXIP1Q6ZW49 1069 aaPredicted RBP22.76■■□□□ 1.23
HMGN1-219ENST00000491183 GGA3Q9NZ52 723 aa22.76■■□□□ 1.23
HMGN1-219ENST00000491183 ECE1P42892 770 aa22.75■■□□□ 1.23
HMGN1-219ENST00000491183 KCNJ4P48050 445 aa22.75■■□□□ 1.23
HMGN1-219ENST00000491183 SCARF1Q14162 830 aa22.75■■□□□ 1.23
HMGN1-219ENST00000491183 LDHAL6AQ6ZMR3 332 aa22.75■■□□□ 1.23
HMGN1-219ENST00000491183 MYOZ2Q9NPC6 264 aa22.75■■□□□ 1.23
HMGN1-219ENST00000491183 GRM1Q13255 1194 aa22.74■■□□□ 1.23
HMGN1-219ENST00000491183 ALDH1L2Q3SY69 923 aa22.74■■□□□ 1.23
HMGN1-219ENST00000491183 TTLL5Q6EMB2 1281 aa22.74■■□□□ 1.23
HMGN1-219ENST00000491183 C15orf52Q6ZUT6 534 aaKnown RBP22.74■■□□□ 1.23
HMGN1-219ENST00000491183 FBXW7Q969H0 707 aa22.74■■□□□ 1.23
HMGN1-219ENST00000491183 CD209Q9NNX6 404 aa22.74■■□□□ 1.23
HMGN1-219ENST00000491183 TAF7LQ5H9L4 462 aa22.73■■□□□ 1.23
HMGN1-219ENST00000491183 ANGEL2Q5VTE6 544 aaKnown RBP22.73■■□□□ 1.23
HMGN1-219ENST00000491183 HHIPL1Q96JK4 782 aa22.73■■□□□ 1.23
HMGN1-219ENST00000491183 THSD7BQ9C0I4 1608 aa22.72■■□□□ 1.23
HMGN1-219ENST00000491183 PLIN1O60240 522 aa22.72■■□□□ 1.23
HMGN1-219ENST00000491183 AOC2O75106 756 aa22.72■■□□□ 1.23
HMGN1-219ENST00000491183 GTF2IP78347 998 aa22.72■■□□□ 1.23
HMGN1-219ENST00000491183 SULF1Q8IWU6 871 aa22.72■■□□□ 1.23
HMGN1-219ENST00000491183 AIDAQ96BJ3 306 aa22.72■■□□□ 1.23
HMGN1-219ENST00000491183 PUS3Q9BZE2 481 aaKnown RBP22.72■■□□□ 1.23
HMGN1-219ENST00000491183 BICC1Q9H694 974 aaKnown RBP22.72■■□□□ 1.23
HMGN1-219ENST00000491183 CNNM1Q9NRU3 951 aa22.72■■□□□ 1.23
HMGN1-219ENST00000491183 MAP2K1Q02750 393 aaPredicted RBP22.71■■□□□ 1.23
HMGN1-219ENST00000491183 RABL6Q3YEC7 729 aaPredicted RBP22.71■■□□□ 1.23
HMGN1-219ENST00000491183 USP44Q9H0E7 712 aa22.71■■□□□ 1.23
HMGN1-219ENST00000491183 MYO3BQ8WXR4 1341 aa22.71■■□□□ 1.23
HMGN1-219ENST00000491183 NBPF9Q3BBW0 867 aa22.7■■□□□ 1.22
HMGN1-219ENST00000491183 ANKRD44Q8N8A2 993 aa22.7■■□□□ 1.22
HMGN1-219ENST00000491183 GBA2Q9HCG7 927 aaPredicted RBP22.7■■□□□ 1.22
HMGN1-219ENST00000491183 SMC4Q9NTJ3 1288 aa22.7■■□□□ 1.22
HMGN1-219ENST00000491183 MAP2K2P36507 400 aa22.69■■□□□ 1.22
HMGN1-219ENST00000491183 CTCFP49711 727 aaPredicted RBP22.69■■□□□ 1.22
HMGN1-219ENST00000491183 TNS4Q8IZW8 715 aa22.69■■□□□ 1.22
HMGN1-219ENST00000491183 OGFOD1Q8N543 542 aa22.69■■□□□ 1.22
HMGN1-219ENST00000491183 RIPOR2Q9Y4F9 1068 aa22.69■■□□□ 1.22
HMGN1-219ENST00000491183 CT47B1P0C2W7 299 aaPredicted RBP22.68■■□□□ 1.22
HMGN1-219ENST00000491183 IL1R1P14778 569 aa22.68■■□□□ 1.22
HMGN1-219ENST00000491183 HUNKP57058 714 aa22.68■■□□□ 1.22
HMGN1-219ENST00000491183 KIAA0825Q8IV33 1275 aa22.68■■□□□ 1.22
HMGN1-219ENST00000491183 CDCA5Q96FF9 252 aa22.68■■□□□ 1.22
HMGN1-219ENST00000491183 SCAF8Q9UPN6 1271 aaKnown RBP22.68■■□□□ 1.22
HMGN1-219ENST00000491183 PITPNM2Q9BZ72 1349 aa22.67■■□□□ 1.22
HMGN1-219ENST00000491183 WNT10BO00744 389 aa22.67■■□□□ 1.22
HMGN1-219ENST00000491183 LBX1P52954 281 aa22.67■■□□□ 1.22
HMGN1-219ENST00000491183 CERS5Q8N5B7 392 aa22.67■■□□□ 1.22
HMGN1-219ENST00000491183 C2orf69Q8N8R5 385 aa22.67■■□□□ 1.22
HMGN1-219ENST00000491183 PRDM10Q9NQV6 1147 aa22.67■■□□□ 1.22
HMGN1-219ENST00000491183 HSPA8P11142 646 aaKnown RBP22.66■■□□□ 1.22
HMGN1-219ENST00000491183 ZNF804AQ7Z570 1209 aa22.66■■□□□ 1.22
HMGN1-219ENST00000491183 NOB1Q9ULX3 412 aaKnown RBP22.66■■□□□ 1.22
HMGN1-219ENST00000491183 MMP14P50281 582 aa22.65■■□□□ 1.22
HMGN1-219ENST00000491183 BRPF1P55201 1214 aaPredicted RBP22.65■■□□□ 1.22
HMGN1-219ENST00000491183 UBE4AQ14139 1066 aa22.65■■□□□ 1.22
HMGN1-219ENST00000491183 ZIC5Q96T25 663 aa22.65■■□□□ 1.22
HMGN1-219ENST00000491183 SASH1O94885 1247 aa22.64■■□□□ 1.21
HMGN1-219ENST00000491183 LRRC24Q50LG9 513 aa22.64■■□□□ 1.21
HMGN1-219ENST00000491183 ZBED3Q96IU2 234 aaPredicted RBP22.64■■□□□ 1.21
HMGN1-219ENST00000491183 FAM155AB1AL88 458 aaPredicted RBP22.63■■□□□ 1.21
HMGN1-219ENST00000491183 PRAMEF18Q5VWM3 479 aa22.63■■□□□ 1.21
HMGN1-219ENST00000491183 RGMBQ6NW40 437 aa22.63■■□□□ 1.21
HMGN1-219ENST00000491183 MIER1Q8N108 512 aa22.63■■□□□ 1.21
HMGN1-219ENST00000491183 KLHDC4Q8TBB5 520 aa22.63■■□□□ 1.21
HMGN1-219ENST00000491183 HDAC9Q9UKV0 1011 aa22.63■■□□□ 1.21
HMGN1-219ENST00000491183 MROH5Q6ZUA9 1318 aa22.62■■□□□ 1.21
HMGN1-219ENST00000491183 GYG1P46976 350 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms