RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 USP44Q9H0E7 712 aa31.52■■■□□ 2.64
HMGN1-217ENST00000489072 BICC1Q9H694 974 aaKnown RBP31.52■■■□□ 2.64
HMGN1-217ENST00000489072 NOB1Q9ULX3 412 aaKnown RBP31.52■■■□□ 2.64
HMGN1-217ENST00000489072 CNTNAP1P78357 1384 aa31.52■■■□□ 2.64
HMGN1-217ENST00000489072 RARSP54136 660 aaKnown RBP31.51■■■□□ 2.63
HMGN1-217ENST00000489072 BRPF1P55201 1214 aaPredicted RBP31.51■■■□□ 2.63
HMGN1-217ENST00000489072 TAF7LQ5H9L4 462 aa31.51■■■□□ 2.63
HMGN1-217ENST00000489072 ANKRD44Q8N8A2 993 aa31.51■■■□□ 2.63
HMGN1-217ENST00000489072 GMLQ99445 158 aa31.51■■■□□ 2.63
HMGN1-217ENST00000489072 COA1Q9GZY4 146 aa31.51■■■□□ 2.63
HMGN1-217ENST00000489072 IRS2Q9Y4H2 1338 aa31.5■■■□□ 2.63
HMGN1-217ENST00000489072 KCNJ4P48050 445 aa31.5■■■□□ 2.63
HMGN1-217ENST00000489072 RABL6Q3YEC7 729 aaPredicted RBP31.5■■■□□ 2.63
HMGN1-217ENST00000489072 LDHAL6AQ6ZMR3 332 aa31.5■■■□□ 2.63
HMGN1-217ENST00000489072 AGBL3Q8NEM8 1001 aa31.5■■■□□ 2.63
HMGN1-217ENST00000489072 RBM26Q5T8P6 1007 aaKnown RBP31.49■■■□□ 2.63
HMGN1-217ENST00000489072 CST9Q5W186 159 aa31.48■■■□□ 2.63
HMGN1-217ENST00000489072 CNNM1Q9NRU3 951 aa31.48■■■□□ 2.63
HMGN1-217ENST00000489072 ZNF280AP59817 542 aaPredicted RBP31.47■■■□□ 2.63
HMGN1-217ENST00000489072 HNRNPUQ00839 825 aaKnown RBP eCLIP31.47■■■□□ 2.63
HMGN1-217ENST00000489072 KIF4BQ2VIQ3 1234 aa31.47■■■□□ 2.63
HMGN1-217ENST00000489072 DACT2Q5SW24 774 aa31.47■■■□□ 2.63
HMGN1-217ENST00000489072 MXD3Q9BW11 206 aa31.47■■■□□ 2.63
HMGN1-217ENST00000489072 PUS3Q9BZE2 481 aaKnown RBP31.47■■■□□ 2.63
HMGN1-217ENST00000489072 C15orf52Q6ZUT6 534 aaKnown RBP31.45■■■□□ 2.63
HMGN1-217ENST00000489072 RASSF10A6NK89 507 aa31.44■■■□□ 2.62
HMGN1-217ENST00000489072 PLIN1O60240 522 aa31.44■■■□□ 2.62
HMGN1-217ENST00000489072 STRIP1Q5VSL9 837 aa31.44■■■□□ 2.62
HMGN1-217ENST00000489072 CDC37L1Q7L3B6 337 aa31.44■■■□□ 2.62
HMGN1-217ENST00000489072 FBXW7Q969H0 707 aa31.44■■■□□ 2.62
HMGN1-217ENST00000489072 API5Q9BZZ5 524 aaKnown RBP31.44■■■□□ 2.62
HMGN1-217ENST00000489072 ABT1Q9ULW3 272 aaKnown RBP31.44■■■□□ 2.62
HMGN1-217ENST00000489072 USP17L8P0C7I0 530 aa31.43■■■□□ 2.62
HMGN1-217ENST00000489072 VEGFBP49765 207 aa31.43■■■□□ 2.62
HMGN1-217ENST00000489072 DLK2Q6UY11 383 aa31.43■■■□□ 2.62
HMGN1-217ENST00000489072 CD209Q9NNX6 404 aa31.43■■■□□ 2.62
HMGN1-217ENST00000489072 ASTN2O75129 1339 aaPredicted RBP31.43■■■□□ 2.62
HMGN1-217ENST00000489072 USP48Q86UV5 1035 aa31.42■■■□□ 2.62
HMGN1-217ENST00000489072 CELF2O95319 508 aaKnown RBP31.41■■■□□ 2.62
HMGN1-217ENST00000489072 DEFB115Q30KQ5 88 aa31.41■■■□□ 2.62
HMGN1-217ENST00000489072 RIPOR2Q9Y4F9 1068 aa31.41■■■□□ 2.62
HMGN1-217ENST00000489072 TTLL5Q6EMB2 1281 aa31.4■■■□□ 2.62
HMGN1-217ENST00000489072 MYOZ2Q9NPC6 264 aa31.4■■■□□ 2.62
HMGN1-217ENST00000489072 KIF16BQ96L93 1317 aa31.4■■■□□ 2.62
HMGN1-217ENST00000489072 GTF2IP78347 998 aa31.39■■■□□ 2.62
HMGN1-217ENST00000489072 KRT26Q7Z3Y9 468 aa31.39■■■□□ 2.62
HMGN1-217ENST00000489072 GGA3Q9NZ52 723 aa31.39■■■□□ 2.62
HMGN1-217ENST00000489072 LRRC24Q50LG9 513 aa31.38■■■□□ 2.61
HMGN1-217ENST00000489072 KLHDC4Q8TBB5 520 aa31.38■■■□□ 2.61
HMGN1-217ENST00000489072 DCPSQ96C86 337 aaKnown RBP31.38■■■□□ 2.61
HMGN1-217ENST00000489072 MYO3BQ8WXR4 1341 aa31.38■■■□□ 2.61
HMGN1-217ENST00000489072 ADM5C9JUS6 153 aa31.37■■■□□ 2.61
HMGN1-217ENST00000489072 HSPA1AP0DMV8 641 aaKnown RBP31.37■■■□□ 2.61
HMGN1-217ENST00000489072 HSPA1BP0DMV9 641 aaKnown RBP31.37■■■□□ 2.61
HMGN1-217ENST00000489072 SCARF1Q14162 830 aa31.37■■■□□ 2.61
HMGN1-217ENST00000489072 ZNF804AQ7Z570 1209 aa31.37■■■□□ 2.61
HMGN1-217ENST00000489072 ARHGAP45Q92619 1136 aa31.37■■■□□ 2.61
HMGN1-217ENST00000489072 ZNF408Q9H9D4 720 aa31.37■■■□□ 2.61
HMGN1-217ENST00000489072 TLL2Q9Y6L7 1015 aa31.37■■■□□ 2.61
HMGN1-217ENST00000489072 MROH5Q6ZUA9 1318 aa31.36■■■□□ 2.61
HMGN1-217ENST00000489072 IL1R1P14778 569 aa31.36■■■□□ 2.61
HMGN1-217ENST00000489072 UBE4AQ14139 1066 aa31.36■■■□□ 2.61
HMGN1-217ENST00000489072 BCAR3O75815 825 aa31.35■■■□□ 2.61
HMGN1-217ENST00000489072 UBTFL1P0CB47 393 aaPredicted RBP31.35■■■□□ 2.61
HMGN1-217ENST00000489072 RFX5P48382 616 aaPredicted RBP31.34■■■□□ 2.61
HMGN1-217ENST00000489072 ANGEL2Q5VTE6 544 aaKnown RBP31.34■■■□□ 2.61
HMGN1-217ENST00000489072 SAPCD2Q86UD0 394 aa31.33■■■□□ 2.61
HMGN1-217ENST00000489072 CERS5Q8N5B7 392 aa31.33■■■□□ 2.61
HMGN1-217ENST00000489072 TNNQ9UQP3 1299 aa31.33■■■□□ 2.61
HMGN1-217ENST00000489072 WDR33Q9C0J8 1336 aaKnown RBP31.32■■■□□ 2.6
HMGN1-217ENST00000489072 INTS3Q68E01 1043 aaKnown RBP31.32■■■□□ 2.6
HMGN1-217ENST00000489072 KIAA0825Q8IV33 1275 aa31.32■■■□□ 2.6
HMGN1-217ENST00000489072 OGFOD1Q8N543 542 aa31.32■■■□□ 2.6
HMGN1-217ENST00000489072 VGLL2Q8N8G2 317 aa31.32■■■□□ 2.6
HMGN1-217ENST00000489072 GYG1P46976 350 aa31.31■■■□□ 2.6
HMGN1-217ENST00000489072 NBPF9Q3BBW0 867 aa31.31■■■□□ 2.6
HMGN1-217ENST00000489072 METTL24Q5JXM2 366 aa31.31■■■□□ 2.6
HMGN1-217ENST00000489072 SULF1Q8IWU6 871 aa31.31■■■□□ 2.6
HMGN1-217ENST00000489072 MEIS3Q99687 375 aa31.31■■■□□ 2.6
HMGN1-217ENST00000489072 TRIM27P14373 513 aa31.3■■■□□ 2.6
HMGN1-217ENST00000489072 CYP4F22Q6NT55 531 aa31.3■■■□□ 2.6
HMGN1-217ENST00000489072 FAM84BQ96KN1 310 aaPredicted RBP31.3■■■□□ 2.6
HMGN1-217ENST00000489072 CAPNS2Q96L46 248 aa31.3■■■□□ 2.6
HMGN1-217ENST00000489072 LRRFIP2Q9Y608 721 aaKnown RBP31.3■■■□□ 2.6
HMGN1-217ENST00000489072 ZBED9Q6R2W3 1325 aa31.29■■■□□ 2.6
HMGN1-217ENST00000489072 THSD7BQ9C0I4 1608 aa31.29■■■□□ 2.6
HMGN1-217ENST00000489072 PTPN12Q05209 780 aaKnown RBP31.29■■■□□ 2.6
HMGN1-217ENST00000489072 PAXIP1Q6ZW49 1069 aaPredicted RBP31.29■■■□□ 2.6
HMGN1-217ENST00000489072 FRAT1Q92837 279 aaPredicted RBP31.29■■■□□ 2.6
HMGN1-217ENST00000489072 JAG2Q9Y219 1238 aa31.29■■■□□ 2.6
HMGN1-217ENST00000489072 IPO8O15397 1037 aaKnown RBP31.28■■■□□ 2.6
HMGN1-217ENST00000489072 PITPNM2Q9BZ72 1349 aa31.27■■■□□ 2.6
HMGN1-217ENST00000489072 WNT10BO00744 389 aa31.27■■■□□ 2.6
HMGN1-217ENST00000489072 PDE8BO95263 885 aa31.27■■■□□ 2.6
HMGN1-217ENST00000489072 HIBADHP31937 336 aaKnown RBP31.27■■■□□ 2.6
HMGN1-217ENST00000489072 MMP14P50281 582 aa31.27■■■□□ 2.6
HMGN1-217ENST00000489072 ATF7IPQ6VMQ6 1270 aa31.27■■■□□ 2.6
HMGN1-217ENST00000489072 TDRD7Q8NHU6 1098 aaKnown RBP31.27■■■□□ 2.6
HMGN1-217ENST00000489072 SCAF8Q9UPN6 1271 aaKnown RBP31.27■■■□□ 2.6
HMGN1-217ENST00000489072 EYA2O00167 538 aa31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms