RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 USP27XA6NNY8 438 aa22.79■■□□□ 1.24
HMG20B-213ENST00000488973 SLIT3O75094 1523 aa22.79■■□□□ 1.24
HMG20B-213ENST00000488973 CTDNEP1O95476 244 aa22.79■■□□□ 1.24
HMG20B-213ENST00000488973 STOX1Q6ZVD7 989 aa22.79■■□□□ 1.24
HMG20B-213ENST00000488973 SEC62Q99442 399 aaKnown RBP22.79■■□□□ 1.24
HMG20B-213ENST00000488973 AGXT2Q9BYV1 514 aa22.79■■□□□ 1.24
HMG20B-213ENST00000488973 SCN11AQ9UI33 1791 aa22.79■■□□□ 1.24
HMG20B-213ENST00000488973 PTPDC1A2A3K4 754 aa22.79■■□□□ 1.24
HMG20B-213ENST00000488973 CEP57L1Q8IYX8 460 aa22.79■■□□□ 1.24
HMG20B-213ENST00000488973 LRRC2Q9BYS8 371 aa22.79■■□□□ 1.24
HMG20B-213ENST00000488973 NAT10Q9H0A0 1025 aaKnown RBP22.79■■□□□ 1.24
HMG20B-213ENST00000488973 USP16Q9Y5T5 823 aa22.79■■□□□ 1.24
HMG20B-213ENST00000488973 GSDMDP57764 484 aa22.78■■□□□ 1.24
HMG20B-213ENST00000488973 IRX5P78411 483 aaPredicted RBP22.78■■□□□ 1.24
HMG20B-213ENST00000488973 ARHGEF25Q86VW2 580 aa22.78■■□□□ 1.24
HMG20B-213ENST00000488973 KIF18AQ8NI77 898 aa22.78■■□□□ 1.24
HMG20B-213ENST00000488973 MYD88Q99836 296 aa22.78■■□□□ 1.24
HMG20B-213ENST00000488973 KIF2AO00139 706 aaPredicted RBP22.78■■□□□ 1.24
HMG20B-213ENST00000488973 ATF3P18847 181 aa22.78■■□□□ 1.24
HMG20B-213ENST00000488973 CCAR2Q8N163 923 aaKnown RBP22.78■■□□□ 1.24
HMG20B-213ENST00000488973 ZNF397Q8NF99 534 aaPredicted RBP22.78■■□□□ 1.24
HMG20B-213ENST00000488973 SALL1Q9NSC2 1324 aa22.77■■□□□ 1.24
HMG20B-213ENST00000488973 RABL6Q3YEC7 729 aaPredicted RBP22.77■■□□□ 1.24
HMG20B-213ENST00000488973 KRT28Q7Z3Y7 464 aa22.77■■□□□ 1.24
HMG20B-213ENST00000488973 KBTBD3Q8NAB2 608 aa22.77■■□□□ 1.24
HMG20B-213ENST00000488973 XAGE3Q8WTP9 111 aa22.77■■□□□ 1.24
HMG20B-213ENST00000488973 FTOQ9C0B1 505 aaKnown RBP eCLIP22.77■■□□□ 1.24
HMG20B-213ENST00000488973 HSPA2P54652 639 aa22.77■■□□□ 1.24
HMG20B-213ENST00000488973 EXOSC10Q01780 885 aaKnown RBP22.77■■□□□ 1.24
HMG20B-213ENST00000488973 FILIP1Q7Z7B0 1213 aa22.77■■□□□ 1.24
HMG20B-213ENST00000488973 TICAM2Q86XR7 235 aa22.77■■□□□ 1.24
HMG20B-213ENST00000488973 ANKRD24Q8TF21 1146 aa22.77■■□□□ 1.24
HMG20B-213ENST00000488973 CHMP4CQ96CF2 233 aa22.77■■□□□ 1.24
HMG20B-213ENST00000488973 TRPM3Q9HCF6 1732 aaPredicted RBP22.77■■□□□ 1.23
HMG20B-213ENST00000488973 ZNF790Q6PG37 636 aa22.76■■□□□ 1.23
HMG20B-213ENST00000488973 FSIP1Q8NA03 581 aa22.76■■□□□ 1.23
HMG20B-213ENST00000488973 ERO1AQ96HE7 468 aa22.76■■□□□ 1.23
HMG20B-213ENST00000488973 DBNDD2Q9BQY9 259 aa22.76■■□□□ 1.23
HMG20B-213ENST00000488973 IMPACTQ9P2X3 320 aa22.76■■□□□ 1.23
HMG20B-213ENST00000488973 NDUFB9Q9Y6M9 179 aa22.76■■□□□ 1.23
HMG20B-213ENST00000488973 PALLDQ8WX93 1383 aa22.76■■□□□ 1.23
HMG20B-213ENST00000488973 CHGBP05060 677 aa22.76■■□□□ 1.23
HMG20B-213ENST00000488973 COPS6Q7L5N1 327 aa22.76■■□□□ 1.23
HMG20B-213ENST00000488973 DSCC1Q9BVC3 393 aa22.76■■□□□ 1.23
HMG20B-213ENST00000488973 OSBPL5Q9H0X9 879 aaPredicted RBP22.76■■□□□ 1.23
HMG20B-213ENST00000488973 ZNF215Q9UL58 517 aaPredicted RBP22.76■■□□□ 1.23
HMG20B-213ENST00000488973 STRCP1A6NGW2 1772 aa22.75■■□□□ 1.23
HMG20B-213ENST00000488973 ZBTB22O15209 634 aa22.75■■□□□ 1.23
HMG20B-213ENST00000488973 GCP02774 474 aa22.75■■□□□ 1.23
HMG20B-213ENST00000488973 MYL6BP14649 208 aa22.75■■□□□ 1.23
HMG20B-213ENST00000488973 APOBRQ0VD83 1088 aa22.75■■□□□ 1.23
HMG20B-213ENST00000488973 HELLSQ9NRZ9 838 aa22.75■■□□□ 1.23
HMG20B-213ENST00000488973 ABCC6O95255 1503 aa22.75■■□□□ 1.23
HMG20B-213ENST00000488973 KDM4FA0A1W2PPD8 638 aa22.74■■□□□ 1.23
HMG20B-213ENST00000488973 ME1P48163 572 aa22.74■■□□□ 1.23
HMG20B-213ENST00000488973 DDX46Q7L014 1031 aaKnown RBP22.74■■□□□ 1.23
HMG20B-213ENST00000488973 AOPEPQ8N6M6 819 aa22.74■■□□□ 1.23
HMG20B-213ENST00000488973 ARFGEF2Q9Y6D5 1785 aa22.74■■□□□ 1.23
HMG20B-213ENST00000488973 SLFNL1Q499Z3 407 aa22.73■■□□□ 1.23
HMG20B-213ENST00000488973 ANKRD13DQ6ZTN6 518 aa22.73■■□□□ 1.23
HMG20B-213ENST00000488973 CADPS2Q86UW7 1296 aa22.73■■□□□ 1.23
HMG20B-213ENST00000488973 FMR1NBQ8N0W7 255 aaPredicted RBP22.73■■□□□ 1.23
HMG20B-213ENST00000488973 MRPS27Q92552 414 aaKnown RBP22.73■■□□□ 1.23
HMG20B-213ENST00000488973 ZNF274Q96GC6 653 aaPredicted RBP22.73■■□□□ 1.23
HMG20B-213ENST00000488973 BPIFA3Q9BQP9 254 aa22.73■■□□□ 1.23
HMG20B-213ENST00000488973 A0A1W2PQ27 194 aa22.72■■□□□ 1.23
HMG20B-213ENST00000488973 A0A1W2PQ64 194 aa22.72■■□□□ 1.23
HMG20B-213ENST00000488973 A0A1W2PQD8 194 aa22.72■■□□□ 1.23
HMG20B-213ENST00000488973 FOSBP53539 338 aa22.72■■□□□ 1.23
HMG20B-213ENST00000488973 KMT5BQ4FZB7 885 aa22.72■■□□□ 1.23
HMG20B-213ENST00000488973 ADALQ6DHV7 355 aa22.72■■□□□ 1.23
HMG20B-213ENST00000488973 ILDR1Q86SU0 546 aaPredicted RBP22.72■■□□□ 1.23
HMG20B-213ENST00000488973 NBPF11Q86T75 865 aa22.72■■□□□ 1.23
HMG20B-213ENST00000488973 RTEL1Q9NZ71 1219 aa22.72■■□□□ 1.23
HMG20B-213ENST00000488973 RGPD5Q99666 1765 aa22.72■■□□□ 1.23
HMG20B-213ENST00000488973 SLU7O95391 586 aaKnown RBP22.71■■□□□ 1.23
HMG20B-213ENST00000488973 CCT2P78371 535 aaKnown RBP22.71■■□□□ 1.23
HMG20B-213ENST00000488973 TRMT1Q9NXH9 659 aaKnown RBP22.71■■□□□ 1.23
HMG20B-213ENST00000488973 PCDHA7Q9UN72 937 aa22.71■■□□□ 1.23
HMG20B-213ENST00000488973 CARMIL3Q8ND23 1372 aa22.71■■□□□ 1.23
HMG20B-213ENST00000488973 SLC39A6Q13433 755 aa22.71■■□□□ 1.23
HMG20B-213ENST00000488973 DHX8Q14562 1220 aaKnown RBP22.71■■□□□ 1.23
HMG20B-213ENST00000488973 ZNF771Q7L3S4 317 aaPredicted RBP22.71■■□□□ 1.23
HMG20B-213ENST00000488973 KRT222Q8N1A0 295 aa22.71■■□□□ 1.23
HMG20B-213ENST00000488973 SLC52A2Q9HAB3 445 aa22.71■■□□□ 1.23
HMG20B-213ENST00000488973 FAM53CQ9NYF3 392 aa22.71■■□□□ 1.23
HMG20B-213ENST00000488973 A0A087WWV3 80 aa22.7■■□□□ 1.22
HMG20B-213ENST00000488973 PDIA3P30101 505 aaKnown RBP22.7■■□□□ 1.22
HMG20B-213ENST00000488973 LRP10Q7Z4F1 713 aa22.7■■□□□ 1.22
HMG20B-213ENST00000488973 E7EWF7 191 aa22.7■■□□□ 1.22
HMG20B-213ENST00000488973 UBE3BQ7Z3V4 1068 aa22.7■■□□□ 1.22
HMG20B-213ENST00000488973 SDF4Q9BRK5 362 aa22.7■■□□□ 1.22
HMG20B-213ENST00000488973 SPEF2Q9C093 1822 aa22.69■■□□□ 1.22
HMG20B-213ENST00000488973 IGSF3O75054 1194 aa22.69■■□□□ 1.22
HMG20B-213ENST00000488973 KCNJ6P48051 423 aa22.69■■□□□ 1.22
HMG20B-213ENST00000488973 FBXL16Q8N461 479 aa22.69■■□□□ 1.22
HMG20B-213ENST00000488973 CCDC150Q8NCX0 1101 aa22.69■■□□□ 1.22
HMG20B-213ENST00000488973 NCOA5Q9HCD5 579 aaKnown RBP22.69■■□□□ 1.22
HMG20B-213ENST00000488973 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.69■■□□□ 1.22
HMG20B-213ENST00000488973 SLFN14P0C7P3 912 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms