RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 HHIPQ96QV1 700 aa8.94□□□□□ -0.98
SMC4-219ENST00000487747 SRA1Q9HD15 236 aaKnown RBP8.94□□□□□ -0.98
SMC4-219ENST00000487747 SALL4Q9UJQ4 1053 aa8.94□□□□□ -0.98
SMC4-219ENST00000487747 C8orf34Q49A92 452 aa8.93□□□□□ -0.98
SMC4-219ENST00000487747 XKR5Q6UX68 686 aa8.93□□□□□ -0.98
SMC4-219ENST00000487747 Q6ZS46 218 aa8.93□□□□□ -0.98
SMC4-219ENST00000487747 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.93□□□□□ -0.98
SMC4-219ENST00000487747 UBL7Q96S82 380 aaPredicted RBP8.93□□□□□ -0.98
SMC4-219ENST00000487747 MUC3BQ9H195 1237 aa8.93□□□□□ -0.98
SMC4-219ENST00000487747 CHRDQ9H2X0 955 aa8.93□□□□□ -0.98
SMC4-219ENST00000487747 ZFP64Q9NPA5 681 aa8.93□□□□□ -0.98
SMC4-219ENST00000487747 NFKBIEO00221 500 aa8.92□□□□□ -0.98
SMC4-219ENST00000487747 FSCN2O14926 492 aa8.92□□□□□ -0.98
SMC4-219ENST00000487747 DDX3YO15523 660 aaKnown RBP8.92□□□□□ -0.98
SMC4-219ENST00000487747 CD68P34810 354 aaPredicted RBP8.92□□□□□ -0.98
SMC4-219ENST00000487747 CACTIN-AS1Q8N1I8 211 aa8.92□□□□□ -0.98
SMC4-219ENST00000487747 POLIQ9UNA4 740 aa8.92□□□□□ -0.98
SMC4-219ENST00000487747 ADAM11O75078 769 aa8.91□□□□□ -0.98
SMC4-219ENST00000487747 GLB1P16278 677 aa8.91□□□□□ -0.98
SMC4-219ENST00000487747 CES1P23141 567 aa8.91□□□□□ -0.98
SMC4-219ENST00000487747 MZF1P28698 734 aaPredicted RBP8.91□□□□□ -0.98
SMC4-219ENST00000487747 LCE3BQ5TA77 95 aa8.91□□□□□ -0.98
SMC4-219ENST00000487747 PPP1R15AO75807 674 aaPredicted RBP8.9□□□□□ -0.98
SMC4-219ENST00000487747 FOXD4L4Q8WXT5 416 aaPredicted RBP8.9□□□□□ -0.98
SMC4-219ENST00000487747 KLHDC7BQ96G42 594 aa8.9□□□□□ -0.98
SMC4-219ENST00000487747 ADAM19Q9H013 955 aa8.9□□□□□ -0.98
SMC4-219ENST00000487747 DZANK1Q9NVP4 752 aa8.9□□□□□ -0.98
SMC4-219ENST00000487747 HYAL3O43820 417 aaPredicted RBP8.89□□□□□ -0.99
SMC4-219ENST00000487747 HGSNATQ68CP4 663 aa8.89□□□□□ -0.99
SMC4-219ENST00000487747 KIAA1211Q6ZU35 1233 aa8.89□□□□□ -0.99
SMC4-219ENST00000487747 ACAD11Q709F0 780 aa8.89□□□□□ -0.99
SMC4-219ENST00000487747 ANO2Q9NQ90 1003 aa8.89□□□□□ -0.99
SMC4-219ENST00000487747 NPR3P17342 541 aa8.88□□□□□ -0.99
SMC4-219ENST00000487747 PTPRAP18433 802 aa8.88□□□□□ -0.99
SMC4-219ENST00000487747 LRP8Q14114 963 aa8.88□□□□□ -0.99
SMC4-219ENST00000487747 UBASH3BQ8TF42 649 aa8.88□□□□□ -0.99
SMC4-219ENST00000487747 KRTAP4-12Q9BQ66 201 aa8.88□□□□□ -0.99
SMC4-219ENST00000487747 EREGO14944 169 aa8.87□□□□□ -0.99
SMC4-219ENST00000487747 FZD6O60353 706 aa8.87□□□□□ -0.99
SMC4-219ENST00000487747 RPLP1P05386 114 aaKnown RBP8.87□□□□□ -0.99
SMC4-219ENST00000487747 FSTP19883 344 aa8.87□□□□□ -0.99
SMC4-219ENST00000487747 ARMC10Q8N2F6 343 aa8.87□□□□□ -0.99
SMC4-219ENST00000487747 FOXD3Q9UJU5 478 aaPredicted RBP8.87□□□□□ -0.99
SMC4-219ENST00000487747 PDE2AO00408 941 aaPredicted RBP8.86□□□□□ -0.99
SMC4-219ENST00000487747 TNFRSF21O75509 655 aa8.86□□□□□ -0.99
SMC4-219ENST00000487747 PCSK2P16519 638 aa8.86□□□□□ -0.99
SMC4-219ENST00000487747 ZNF211Q13398 564 aaPredicted RBP8.86□□□□□ -0.99
SMC4-219ENST00000487747 AAMPQ13685 434 aa8.86□□□□□ -0.99
SMC4-219ENST00000487747 DUOXA2Q1HG44 320 aa8.86□□□□□ -0.99
SMC4-219ENST00000487747 DCAF11Q8TEB1 546 aa8.86□□□□□ -0.99
SMC4-219ENST00000487747 CCDC87Q9NVE4 849 aa8.86□□□□□ -0.99
SMC4-219ENST00000487747 FAM117BQ6P1L5 589 aa8.85□□□□□ -0.99
SMC4-219ENST00000487747 KLHL23Q8NBE8 558 aa8.85□□□□□ -0.99
SMC4-219ENST00000487747 ZKSCAN3Q9BRR0 538 aa8.85□□□□□ -0.99
SMC4-219ENST00000487747 SEC31BQ9NQW1 1179 aa8.85□□□□□ -0.99
SMC4-219ENST00000487747 RNF112Q9ULX5 631 aa8.85□□□□□ -0.99
SMC4-219ENST00000487747 H3BRJ5 948 aa8.84□□□□□ -0.99
SMC4-219ENST00000487747 ABL1P00519 1130 aa8.84□□□□□ -0.99
SMC4-219ENST00000487747 FKBP4Q02790 459 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMC4-219ENST00000487747 ALKBH2Q6NS38 261 aa8.84□□□□□ -0.99
SMC4-219ENST00000487747 TTC16Q8NEE8 873 aa8.84□□□□□ -0.99
SMC4-219ENST00000487747 OSMRQ99650 979 aa8.84□□□□□ -0.99
SMC4-219ENST00000487747 SOX13Q9UN79 622 aa8.84□□□□□ -0.99
SMC4-219ENST00000487747 NLRP12P59046 1061 aa8.83□□□□□ -1
SMC4-219ENST00000487747 SLC7A3Q8WY07 619 aa8.83□□□□□ -1
SMC4-219ENST00000487747 NXPE3Q969Y0 559 aa8.83□□□□□ -1
SMC4-219ENST00000487747 LATS2Q9NRM7 1088 aa8.83□□□□□ -1
SMC4-219ENST00000487747 RAXQ9Y2V3 346 aa8.83□□□□□ -1
SMC4-219ENST00000487747 PHACTR2O75167 634 aa8.82□□□□□ -1
SMC4-219ENST00000487747 FAM13AO94988 1023 aa8.82□□□□□ -1
SMC4-219ENST00000487747 C14orf37Q86TY3 774 aa8.82□□□□□ -1
SMC4-219ENST00000487747 TMEM102Q8N9M5 508 aaPredicted RBP8.82□□□□□ -1
SMC4-219ENST00000487747 FAM46AQ96IP4 442 aaKnown RBP8.82□□□□□ -1
SMC4-219ENST00000487747 SOX1O00570 391 aaPredicted RBP8.81□□□□□ -1
SMC4-219ENST00000487747 PIP4K2BP78356 416 aa8.81□□□□□ -1
SMC4-219ENST00000487747 PEAR1Q5VY43 1037 aaPredicted RBP8.81□□□□□ -1
SMC4-219ENST00000487747 VN1R5Q7Z5H4 357 aa8.81□□□□□ -1
SMC4-219ENST00000487747 NBPF11Q86T75 865 aa8.81□□□□□ -1
SMC4-219ENST00000487747 PMEPA1Q969W9 287 aa8.81□□□□□ -1
SMC4-219ENST00000487747 FAM177BA6PVY3 158 aa8.8□□□□□ -1
SMC4-219ENST00000487747 POLR3DP05423 398 aaPredicted RBP8.8□□□□□ -1
SMC4-219ENST00000487747 CABP4P57796 275 aa8.8□□□□□ -1
SMC4-219ENST00000487747 SF3B2Q13435 895 aaKnown RBP8.8□□□□□ -1
SMC4-219ENST00000487747 GJD3Q8N144 294 aa8.8□□□□□ -1
SMC4-219ENST00000487747 UTP4Q969X6 686 aaKnown RBP8.8□□□□□ -1
SMC4-219ENST00000487747 CEP41Q9BYV8 373 aa8.8□□□□□ -1
SMC4-219ENST00000487747 STOML1Q9UBI4 398 aa8.8□□□□□ -1
SMC4-219ENST00000487747 MED26O95402 600 aa8.79□□□□□ -1
SMC4-219ENST00000487747 SSTR4P31391 388 aa8.79□□□□□ -1
SMC4-219ENST00000487747 PREPP48147 710 aa8.79□□□□□ -1
SMC4-219ENST00000487747 ECM1Q16610 540 aa8.79□□□□□ -1
SMC4-219ENST00000487747 SNX29Q8TEQ0 813 aa8.79□□□□□ -1
SMC4-219ENST00000487747 WNT8BQ93098 351 aa8.79□□□□□ -1
SMC4-219ENST00000487747 OSGEPQ9NPF4 335 aa8.79□□□□□ -1
SMC4-219ENST00000487747 HMX2A2RU54 273 aa8.78□□□□□ -1
SMC4-219ENST00000487747 METTL12A8MUP2 240 aa8.78□□□□□ -1
SMC4-219ENST00000487747 DHX15O43143 795 aaKnown RBP8.78□□□□□ -1
SMC4-219ENST00000487747 IGLV1-40P01703 118 aa8.78□□□□□ -1
SMC4-219ENST00000487747 TRIM42Q8IWZ5 723 aa8.78□□□□□ -1
SMC4-219ENST00000487747 BSNDQ8WZ55 320 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms