RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 SUV39H2Q9H5I1 410 aa10.09□□□□□ -0.79
RTN4-214ENST00000486085 MRS2Q9HD23 443 aa10.09□□□□□ -0.79
RTN4-214ENST00000486085 NFKBIEO00221 500 aa10.08□□□□□ -0.8
RTN4-214ENST00000486085 GRM2Q14416 872 aa10.08□□□□□ -0.8
RTN4-214ENST00000486085 BTBD6Q96KE9 485 aa10.08□□□□□ -0.8
RTN4-214ENST00000486085 STARD13Q9Y3M8 1113 aa10.08□□□□□ -0.8
RTN4-214ENST00000486085 AK5Q9Y6K8 562 aa10.08□□□□□ -0.8
RTN4-214ENST00000486085 SHISA8B8ZZ34 492 aa10.07□□□□□ -0.8
RTN4-214ENST00000486085 PDE2AO00408 941 aaPredicted RBP10.07□□□□□ -0.8
RTN4-214ENST00000486085 RGS9O75916 674 aaPredicted RBP10.07□□□□□ -0.8
RTN4-214ENST00000486085 SMNDC1O75940 238 aaKnown RBP eCLIP10.07□□□□□ -0.82e-15■■■□□ 16
RTN4-214ENST00000486085 CHSY3Q70JA7 882 aa10.07□□□□□ -0.8
RTN4-214ENST00000486085 GIPC1O14908 333 aa10.06□□□□□ -0.8
RTN4-214ENST00000486085 SORBS3O60504 671 aa10.06□□□□□ -0.8
RTN4-214ENST00000486085 AMPD1P23109 780 aa10.06□□□□□ -0.8
RTN4-214ENST00000486085 EIF4BP23588 611 aaKnown RBP10.06□□□□□ -0.8
RTN4-214ENST00000486085 TMEM102Q8N9M5 508 aaPredicted RBP10.06□□□□□ -0.8
RTN4-214ENST00000486085 NXPE3Q969Y0 559 aa10.06□□□□□ -0.8
RTN4-214ENST00000486085 TCF12Q99081 682 aa10.06□□□□□ -0.8
RTN4-214ENST00000486085 POP1Q99575 1024 aaKnown RBP10.06□□□□□ -0.8
RTN4-214ENST00000486085 C12orf49Q9H741 205 aa10.06□□□□□ -0.8
RTN4-214ENST00000486085 PPP4R2Q9NY27 417 aa10.06□□□□□ -0.8
RTN4-214ENST00000486085 FRRS1LQ9P0K9 344 aa10.06□□□□□ -0.8
RTN4-214ENST00000486085 VTI1BQ9UEU0 232 aa10.06□□□□□ -0.8
RTN4-214ENST00000486085 ALBP02768 609 aa10.05□□□□□ -0.8
RTN4-214ENST00000486085 MAP3K10Q02779 954 aa10.05□□□□□ -0.8
RTN4-214ENST00000486085 GLIS3Q8NEA6 775 aa10.05□□□□□ -0.8
RTN4-214ENST00000486085 ASAP3Q8TDY4 903 aa10.05□□□□□ -0.8
RTN4-214ENST00000486085 JPH1Q9HDC5 661 aaPredicted RBP10.05□□□□□ -0.8
RTN4-214ENST00000486085 KIAA1522Q9P206 1035 aaPredicted RBP10.05□□□□□ -0.8
RTN4-214ENST00000486085 TRIM33Q9UPN9 1127 aa10.05□□□□□ -0.8
RTN4-214ENST00000486085 TRAK1Q9UPV9 953 aa10.05□□□□□ -0.8
RTN4-214ENST00000486085 METTL12A8MUP2 240 aa10.04□□□□□ -0.8
RTN4-214ENST00000486085 E9PSI1 815 aa10.04□□□□□ -0.8
RTN4-214ENST00000486085 ZNF385CQ66K41 422 aaPredicted RBP10.04□□□□□ -0.8
RTN4-214ENST00000486085 GDF6Q6KF10 455 aaPredicted RBP10.04□□□□□ -0.8
RTN4-214ENST00000486085 C8orf86Q6ZUL3 223 aa10.04□□□□□ -0.8
RTN4-214ENST00000486085 CCNJLQ8IV13 435 aa10.04□□□□□ -0.8
RTN4-214ENST00000486085 SVOPQ8N4V2 548 aa10.04□□□□□ -0.8
RTN4-214ENST00000486085 LACRTQ9GZZ8 138 aa10.04□□□□□ -0.8
RTN4-214ENST00000486085 LRRC4BQ9NT99 713 aa10.04□□□□□ -0.8
RTN4-214ENST00000486085 M0R082 166 aa10.03□□□□□ -0.8
RTN4-214ENST00000486085 GRIA4P48058 902 aa10.03□□□□□ -0.8
RTN4-214ENST00000486085 FCGRTP55899 365 aa10.03□□□□□ -0.8
RTN4-214ENST00000486085 SPRED3Q2MJR0 410 aa10.03□□□□□ -0.8
RTN4-214ENST00000486085 C20orf204Q6ZNR8 217 aa10.03□□□□□ -0.8
RTN4-214ENST00000486085 NEDD1Q8NHV4 660 aa10.03□□□□□ -0.8
RTN4-214ENST00000486085 ZNF417Q8TAU3 575 aa10.03□□□□□ -0.8
RTN4-214ENST00000486085 ZNF587Q96SQ5 575 aaPredicted RBP10.03□□□□□ -0.8
RTN4-214ENST00000486085 TMEM238LA0A1B0GVL6 79 aa10.02□□□□□ -0.81
RTN4-214ENST00000486085 USP17L7P0C7H9 530 aa10.02□□□□□ -0.81
RTN4-214ENST00000486085 MRPL58Q14197 206 aaKnown RBP10.02□□□□□ -0.81
RTN4-214ENST00000486085 KANK3Q6NY19 840 aa10.02□□□□□ -0.81
RTN4-214ENST00000486085 ADAMTSL4Q6UY14 1074 aa10.02□□□□□ -0.81
RTN4-214ENST00000486085 TTC9Q92623 222 aa10.02□□□□□ -0.81
RTN4-214ENST00000486085 BHLHE41Q9C0J9 482 aaPredicted RBP10.02□□□□□ -0.81
RTN4-214ENST00000486085 ABCB6Q9NP58 842 aa10.02□□□□□ -0.81
RTN4-214ENST00000486085 LILRB5O75023 590 aa10.01□□□□□ -0.81
RTN4-214ENST00000486085 ITGAEP38570 1179 aa10.01□□□□□ -0.81
RTN4-214ENST00000486085 PRPF40BQ6NWY9 871 aaKnown RBP10.01□□□□□ -0.81
RTN4-214ENST00000486085 SRCIN1Q9C0H9 1055 aa10.01□□□□□ -0.81
RTN4-214ENST00000486085 RRAGCQ9HB90 399 aa10.01□□□□□ -0.81
RTN4-214ENST00000486085 ENAMQ9NRM1 1142 aa10.01□□□□□ -0.81
RTN4-214ENST00000486085 FAM8A1Q9UBU6 413 aa10.01□□□□□ -0.81
RTN4-214ENST00000486085 A0A096LPE4 126 aa10□□□□□ -0.81
RTN4-214ENST00000486085 A0A1W2PPZ6 126 aa10□□□□□ -0.81
RTN4-214ENST00000486085 WIPF1O43516 503 aa10□□□□□ -0.81
RTN4-214ENST00000486085 PTPRAP18433 802 aa10□□□□□ -0.81
RTN4-214ENST00000486085 TSNAXIP1Q2TAA8 658 aa10□□□□□ -0.81
RTN4-214ENST00000486085 DTHD1Q6ZMT9 781 aa10□□□□□ -0.81
RTN4-214ENST00000486085 AKAP2Q9Y2D5 859 aa10□□□□□ -0.81
RTN4-214ENST00000486085 GSTT1P30711 240 aa9.99□□□□□ -0.81
RTN4-214ENST00000486085 AFF1P51825 1210 aaKnown RBP9.99□□□□□ -0.81
RTN4-214ENST00000486085 GRIK5Q16478 980 aa9.99□□□□□ -0.81
RTN4-214ENST00000486085 BACH2Q9BYV9 841 aa9.99□□□□□ -0.81
RTN4-214ENST00000486085 MUC3BQ9H195 1237 aa9.99□□□□□ -0.81
RTN4-214ENST00000486085 SH2B1Q9NRF2 756 aaPredicted RBP9.99□□□□□ -0.81
RTN4-214ENST00000486085 FAM177BA6PVY3 158 aa9.98□□□□□ -0.81
RTN4-214ENST00000486085 CTSHP09668 335 aa9.98□□□□□ -0.81
RTN4-214ENST00000486085 VAMP1P23763 118 aa9.98□□□□□ -0.81
RTN4-214ENST00000486085 CDC27P30260 824 aa9.98□□□□□ -0.81
RTN4-214ENST00000486085 IL22RA1Q8N6P7 574 aa9.98□□□□□ -0.81
RTN4-214ENST00000486085 BSNDQ8WZ55 320 aa9.98□□□□□ -0.81
RTN4-214ENST00000486085 ADAM19Q9H013 955 aa9.98□□□□□ -0.81
RTN4-214ENST00000486085 CDC25BP30305 580 aa9.97□□□□□ -0.81
RTN4-214ENST00000486085 TMEM87AQ8NBN3 555 aa9.97□□□□□ -0.81
RTN4-214ENST00000486085 C3orf58Q8NDZ4 430 aa9.97□□□□□ -0.81
RTN4-214ENST00000486085 ARHGEF15O94989 841 aa9.96□□□□□ -0.82
RTN4-214ENST00000486085 ITPKAP23677 461 aa9.96□□□□□ -0.82
RTN4-214ENST00000486085 SOX13Q9UN79 622 aa9.96□□□□□ -0.82
RTN4-214ENST00000486085 RECKO95980 971 aa9.95□□□□□ -0.82
RTN4-214ENST00000486085 XRCC5P13010 732 aaKnown RBP9.95□□□□□ -0.82
RTN4-214ENST00000486085 MEI1Q5TIA1 1274 aa9.95□□□□□ -0.82
RTN4-214ENST00000486085 WFDC8Q8IUA0 241 aa9.95□□□□□ -0.82
RTN4-214ENST00000486085 CACTIN-AS1Q8N1I8 211 aa9.95□□□□□ -0.82
RTN4-214ENST00000486085 ZSCAN1Q8NBB4 408 aa9.95□□□□□ -0.82
RTN4-214ENST00000486085 CRELD1Q96HD1 420 aa9.95□□□□□ -0.82
RTN4-214ENST00000486085 PRDM6Q9NQX0 595 aa9.95□□□□□ -0.82
RTN4-214ENST00000486085 HOXB4P17483 251 aaPredicted RBP9.94□□□□□ -0.82
RTN4-214ENST00000486085 EPHA1P21709 976 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms