RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 BCAMP50895 628 aa12.25□□□□□ -0.45
HDAC6-226ENST00000483656 NMIQ13287 307 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-226ENST00000483656 KBTBD3Q8NAB2 608 aa12.25□□□□□ -0.45
HDAC6-226ENST00000483656 SLC16A10Q8TF71 515 aa12.25□□□□□ -0.45
HDAC6-226ENST00000483656 FAM227BQ96M60 508 aa12.25□□□□□ -0.45
HDAC6-226ENST00000483656 FSD1Q9BTV5 496 aa12.25□□□□□ -0.45
HDAC6-226ENST00000483656 UPF2Q9HAU5 1272 aaKnown RBP12.25□□□□□ -0.45
HDAC6-226ENST00000483656 COL11A2P13942 1736 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-226ENST00000483656 ZNF804BA4D1E1 1349 aa12.24□□□□□ -0.45
HDAC6-226ENST00000483656 UQCRFS1P1P0C7P4 283 aa12.24□□□□□ -0.45
HDAC6-226ENST00000483656 NPR1P16066 1061 aa12.24□□□□□ -0.45
HDAC6-226ENST00000483656 GPSM2P81274 684 aa12.24□□□□□ -0.45
HDAC6-226ENST00000483656 FKBP4Q02790 459 aaKnown RBP eCLIP12.24□□□□□ -0.45
HDAC6-226ENST00000483656 RFX7Q2KHR2 1363 aa12.24□□□□□ -0.45
HDAC6-226ENST00000483656 CWC27Q6UX04 472 aaKnown RBP12.24□□□□□ -0.45
HDAC6-226ENST00000483656 FAM84BQ96KN1 310 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-226ENST00000483656 KIF2CQ99661 725 aa12.24□□□□□ -0.45
HDAC6-226ENST00000483656 DIAPH3Q9NSV4 1193 aa12.24□□□□□ -0.45
HDAC6-226ENST00000483656 HMG20BQ9P0W2 317 aa12.24□□□□□ -0.45
HDAC6-226ENST00000483656 A0A0D9SFI3 127 aa12.23□□□□□ -0.45
HDAC6-226ENST00000483656 HIP1O00291 1037 aa12.23□□□□□ -0.45
HDAC6-226ENST00000483656 EIF5BO60841 1220 aaKnown RBP12.23□□□□□ -0.45
HDAC6-226ENST00000483656 REC8O95072 547 aa12.23□□□□□ -0.45
HDAC6-226ENST00000483656 CYP2E1P05181 493 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-226ENST00000483656 GYG1P46976 350 aa12.23□□□□□ -0.45
HDAC6-226ENST00000483656 RASGRF1Q13972 1273 aa12.23□□□□□ -0.45
HDAC6-226ENST00000483656 SLFNL1Q499Z3 407 aa12.23□□□□□ -0.45
HDAC6-226ENST00000483656 FBXO33Q7Z6M2 555 aa12.23□□□□□ -0.45
HDAC6-226ENST00000483656 LSG1Q9H089 658 aaKnown RBP12.23□□□□□ -0.45
HDAC6-226ENST00000483656 PIH1D3Q9NQM4 214 aaKnown RBP12.23□□□□□ -0.45
HDAC6-226ENST00000483656 XDHP47989 1333 aa12.22□□□□□ -0.45
HDAC6-226ENST00000483656 ANP32AP39687 249 aaKnown RBP12.22□□□□□ -0.45
HDAC6-226ENST00000483656 TXNRD3Q86VQ6 643 aa12.22□□□□□ -0.45
HDAC6-226ENST00000483656 TICAM2Q86XR7 235 aa12.22□□□□□ -0.45
HDAC6-226ENST00000483656 C2CD5Q86YS7 1000 aa12.22□□□□□ -0.45
HDAC6-226ENST00000483656 SP8Q8IXZ3 490 aa12.22□□□□□ -0.45
HDAC6-226ENST00000483656 MASTLQ96GX5 879 aa12.22□□□□□ -0.45
HDAC6-226ENST00000483656 LEMD3Q9Y2U8 911 aa12.22□□□□□ -0.45
HDAC6-226ENST00000483656 LRRC37AA6NMS7 1700 aa12.22□□□□□ -0.45
HDAC6-226ENST00000483656 C10orf71Q711Q0 1435 aa12.21□□□□□ -0.45
HDAC6-226ENST00000483656 MED23Q9ULK4 1368 aa12.21□□□□□ -0.45
HDAC6-226ENST00000483656 PPEF1O14829 653 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-226ENST00000483656 ZMYM1Q5SVZ6 1142 aa12.21□□□□□ -0.45
HDAC6-226ENST00000483656 STYK1Q6J9G0 422 aa12.21□□□□□ -0.45
HDAC6-226ENST00000483656 C15orf52Q6ZUT6 534 aaKnown RBP12.21□□□□□ -0.45
HDAC6-226ENST00000483656 TMC4Q7Z404 712 aa12.21□□□□□ -0.45
HDAC6-226ENST00000483656 SPATA5Q8NB90 893 aa12.21□□□□□ -0.45
HDAC6-226ENST00000483656 RUFY2Q8WXA3 655 aa12.21□□□□□ -0.45
HDAC6-226ENST00000483656 GPR101Q96P66 508 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-226ENST00000483656 SEC62Q99442 399 aaKnown RBP12.21□□□□□ -0.45
HDAC6-226ENST00000483656 ANO2Q9NQ90 1003 aa12.21□□□□□ -0.45
HDAC6-226ENST00000483656 PODXL2Q9NZ53 605 aa12.21□□□□□ -0.45
HDAC6-226ENST00000483656 ATP6V0A2Q9Y487 856 aa12.21□□□□□ -0.45
HDAC6-226ENST00000483656 COL1A1P02452 1464 aaPredicted RBP12.21□□□□□ -0.46
HDAC6-226ENST00000483656 LTBP1Q14766 1721 aa12.2□□□□□ -0.46
HDAC6-226ENST00000483656 RAD50Q92878 1312 aa12.2□□□□□ -0.46
HDAC6-226ENST00000483656 H0YIN7 160 aa12.2□□□□□ -0.46
HDAC6-226ENST00000483656 ZBTB22O15209 634 aa12.2□□□□□ -0.46
HDAC6-226ENST00000483656 RNF113AO15541 343 aaKnown RBP12.2□□□□□ -0.46
HDAC6-226ENST00000483656 EPB41L2O43491 1005 aaKnown RBP12.2□□□□□ -0.46
HDAC6-226ENST00000483656 ZBTB7AO95365 584 aa12.2□□□□□ -0.46
HDAC6-226ENST00000483656 CHRNA5P30532 468 aa12.2□□□□□ -0.46
HDAC6-226ENST00000483656 ALDH1B1P30837 517 aa12.2□□□□□ -0.46
HDAC6-226ENST00000483656 KCNJ4P48050 445 aa12.2□□□□□ -0.46
HDAC6-226ENST00000483656 PTH1RQ03431 593 aa12.2□□□□□ -0.46
HDAC6-226ENST00000483656 R3HDM1Q15032 1099 aaKnown RBP12.2□□□□□ -0.46
HDAC6-226ENST00000483656 OLFM4Q6UX06 510 aa12.2□□□□□ -0.46
HDAC6-226ENST00000483656 ZNF589Q86UQ0 364 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-226ENST00000483656 ANKIB1Q9P2G1 1089 aa12.2□□□□□ -0.46
HDAC6-226ENST00000483656 IQSEC3Q9UPP2 1182 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-226ENST00000483656 ATP2B4P23634 1241 aa12.19□□□□□ -0.46
HDAC6-226ENST00000483656 HIBADHP31937 336 aaKnown RBP12.19□□□□□ -0.46
HDAC6-226ENST00000483656 CAVIN4Q5BKX8 364 aa12.19□□□□□ -0.46
HDAC6-226ENST00000483656 CCDC129Q6ZRS4 1044 aa12.19□□□□□ -0.46
HDAC6-226ENST00000483656 TBC1D16Q8TBP0 767 aa12.19□□□□□ -0.46
HDAC6-226ENST00000483656 ZNF622Q969S3 477 aaKnown RBP eCLIP12.19□□□□□ -0.461e-7■□□□□ 10.9
HDAC6-226ENST00000483656 HELLSQ9NRZ9 838 aa12.19□□□□□ -0.46
HDAC6-226ENST00000483656 POLLQ9UGP5 575 aa12.19□□□□□ -0.46
HDAC6-226ENST00000483656 NSFL1CQ9UNZ2 370 aaKnown RBP12.19□□□□□ -0.46
HDAC6-226ENST00000483656 UFL1O94874 794 aa12.18□□□□□ -0.46
HDAC6-226ENST00000483656 ADD2P35612 726 aa12.18□□□□□ -0.46
HDAC6-226ENST00000483656 TTF1Q15361 905 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-226ENST00000483656 MCMDC2Q4G0Z9 681 aa12.18□□□□□ -0.46
HDAC6-226ENST00000483656 C7orf43Q8WVR3 580 aa12.18□□□□□ -0.46
HDAC6-226ENST00000483656 OSBP2Q969R2 916 aa12.18□□□□□ -0.46
HDAC6-226ENST00000483656 IL17RAQ96F46 866 aa12.18□□□□□ -0.46
HDAC6-226ENST00000483656 IPO9Q96P70 1041 aaKnown RBP12.18□□□□□ -0.46
HDAC6-226ENST00000483656 GNL3LQ9NVN8 582 aaKnown RBP12.18□□□□□ -0.46
HDAC6-226ENST00000483656 GGA1Q9UJY5 639 aa12.18□□□□□ -0.46
HDAC6-226ENST00000483656 PALD1Q9ULE6 856 aa12.18□□□□□ -0.46
HDAC6-226ENST00000483656 ATF5Q9Y2D1 282 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-226ENST00000483656 DUOX1Q9NRD9 1551 aa12.18□□□□□ -0.46
HDAC6-226ENST00000483656 MAST3O60307 1309 aa12.17□□□□□ -0.46
HDAC6-226ENST00000483656 CCDC171Q6TFL3 1326 aa12.17□□□□□ -0.46
HDAC6-226ENST00000483656 MYO5AQ9Y4I1 1855 aaKnown RBP12.17□□□□□ -0.46
HDAC6-226ENST00000483656 SLX4Q8IY92 1834 aa12.17□□□□□ -0.46
HDAC6-226ENST00000483656 TCRBV5S4A2TA0A5A2 114 aa12.17□□□□□ -0.46
HDAC6-226ENST00000483656 M0R2C6 588 aa12.17□□□□□ -0.46
HDAC6-226ENST00000483656 SEMA3EO15041 775 aa12.17□□□□□ -0.46
HDAC6-226ENST00000483656 ZFYP08048 801 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms