RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 DHX32Q7L7V1 743 aaKnown RBP5.89□□□□□ -1.47
VPS41-212ENST00000482217 GALNT12Q8IXK2 581 aa5.89□□□□□ -1.47
VPS41-212ENST00000482217 CCDC74AQ96AQ1 378 aa5.89□□□□□ -1.47
VPS41-212ENST00000482217 UBE2OQ9C0C9 1292 aaKnown RBP5.89□□□□□ -1.47
VPS41-212ENST00000482217 WWC3Q9ULE0 1092 aa5.89□□□□□ -1.47
VPS41-212ENST00000482217 M0R082 166 aa5.88□□□□□ -1.47
VPS41-212ENST00000482217 GIPC1O14908 333 aa5.88□□□□□ -1.47
VPS41-212ENST00000482217 CLSTN1O94985 981 aa5.88□□□□□ -1.47
VPS41-212ENST00000482217 VAMP1P23763 118 aa5.88□□□□□ -1.47
VPS41-212ENST00000482217 COL8A1P27658 744 aa5.88□□□□□ -1.47
VPS41-212ENST00000482217 GPLD1P80108 840 aa5.88□□□□□ -1.47
VPS41-212ENST00000482217 TAGLNQ01995 201 aaKnown RBP5.88□□□□□ -1.47
VPS41-212ENST00000482217 USPL1Q5W0Q7 1092 aa5.88□□□□□ -1.47
VPS41-212ENST00000482217 ZNF417Q8TAU3 575 aa5.88□□□□□ -1.47
VPS41-212ENST00000482217 TRPM4Q8TD43 1214 aa5.88□□□□□ -1.47
VPS41-212ENST00000482217 ZNF587Q96SQ5 575 aaPredicted RBP5.88□□□□□ -1.47
VPS41-212ENST00000482217 DUSP9Q99956 384 aaKnown RBP5.88□□□□□ -1.47
VPS41-212ENST00000482217 PARP2Q9UGN5 583 aa5.88□□□□□ -1.47
VPS41-212ENST00000482217 SALL4Q9UJQ4 1053 aa5.88□□□□□ -1.47
VPS41-212ENST00000482217 LILRB5O75023 590 aa5.87□□□□□ -1.47
VPS41-212ENST00000482217 CYP2E1P05181 493 aaPredicted RBP5.87□□□□□ -1.47
VPS41-212ENST00000482217 GNA15P30679 374 aa5.87□□□□□ -1.47
VPS41-212ENST00000482217 DAB2P98082 770 aa5.87□□□□□ -1.47
VPS41-212ENST00000482217 PLA2G4EQ3MJ16 856 aa5.87□□□□□ -1.47
VPS41-212ENST00000482217 GPAT2Q6NUI2 795 aa5.87□□□□□ -1.47
VPS41-212ENST00000482217 C20orf204Q6ZNR8 217 aa5.87□□□□□ -1.47
VPS41-212ENST00000482217 TMC4Q7Z404 712 aa5.87□□□□□ -1.47
VPS41-212ENST00000482217 MICALL1Q8N3F8 863 aa5.87□□□□□ -1.47
VPS41-212ENST00000482217 MRRFQ96E11 262 aaKnown RBP5.87□□□□□ -1.47
VPS41-212ENST00000482217 CCDC136Q96JN2 1154 aa5.87□□□□□ -1.47
VPS41-212ENST00000482217 SETDB2Q96T68 719 aa5.87□□□□□ -1.47
VPS41-212ENST00000482217 NLRP2Q9NX02 1062 aa5.87□□□□□ -1.47
VPS41-212ENST00000482217 SLC6A14Q9UN76 642 aa5.87□□□□□ -1.47
VPS41-212ENST00000482217 SPG7Q9UQ90 795 aa5.87□□□□□ -1.47
VPS41-212ENST00000482217 STARD13Q9Y3M8 1113 aa5.87□□□□□ -1.47
VPS41-212ENST00000482217 A0A0U1RQG5 324 aaPredicted RBP5.86□□□□□ -1.47
VPS41-212ENST00000482217 ALBP02768 609 aa5.86□□□□□ -1.47
VPS41-212ENST00000482217 SPATA31C1P0DKV0 1188 aa5.86□□□□□ -1.47
VPS41-212ENST00000482217 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.86□□□□□ -1.47
VPS41-212ENST00000482217 KIAA0319Q5VV43 1072 aa5.86□□□□□ -1.47
VPS41-212ENST00000482217 NCAPG2Q86XI2 1143 aa5.86□□□□□ -1.47
VPS41-212ENST00000482217 TRIM11Q96F44 468 aa5.86□□□□□ -1.47
VPS41-212ENST00000482217 SPACA7Q96KW9 195 aa5.86□□□□□ -1.47
VPS41-212ENST00000482217 PLVAPQ9BX97 442 aa5.86□□□□□ -1.47
VPS41-212ENST00000482217 SRCIN1Q9C0H9 1055 aa5.86□□□□□ -1.47
VPS41-212ENST00000482217 SUV39H2Q9H5I1 410 aa5.86□□□□□ -1.47
VPS41-212ENST00000482217 MRS2Q9HD23 443 aa5.86□□□□□ -1.47
VPS41-212ENST00000482217 NPHS2Q9NP85 383 aa5.86□□□□□ -1.47
VPS41-212ENST00000482217 DNAJB12Q9NXW2 375 aaKnown RBP5.86□□□□□ -1.47
VPS41-212ENST00000482217 FRRS1LQ9P0K9 344 aa5.86□□□□□ -1.47
VPS41-212ENST00000482217 KANSL3Q9P2N6 904 aa5.86□□□□□ -1.47
VPS41-212ENST00000482217 LOC102724428A0A0B4J2F2 783 aa5.85□□□□□ -1.47
VPS41-212ENST00000482217 MSTNO14793 375 aa5.85□□□□□ -1.47
VPS41-212ENST00000482217 POLR3DP05423 398 aaPredicted RBP5.85□□□□□ -1.47
VPS41-212ENST00000482217 SIK1P57059 783 aa5.85□□□□□ -1.47
VPS41-212ENST00000482217 TBC1D8BQ0IIM8 1120 aa5.85□□□□□ -1.47
VPS41-212ENST00000482217 PSMD2Q13200 908 aa5.85□□□□□ -1.47
VPS41-212ENST00000482217 MRPL58Q14197 206 aaKnown RBP5.85□□□□□ -1.47
VPS41-212ENST00000482217 PRRT3Q5FWE3 981 aa5.85□□□□□ -1.47
VPS41-212ENST00000482217 EPS8L3Q8TE67 593 aaKnown RBP5.85□□□□□ -1.47
VPS41-212ENST00000482217 SPATA32Q96LK8 384 aa5.85□□□□□ -1.47
VPS41-212ENST00000482217 IGFLR1Q9H665 355 aa5.85□□□□□ -1.47
VPS41-212ENST00000482217 KIAA1522Q9P206 1035 aaPredicted RBP5.85□□□□□ -1.47
VPS41-212ENST00000482217 A0A1W2PP55 124 aa5.84□□□□□ -1.47
VPS41-212ENST00000482217 KRBA1A5PL33 1030 aa5.84□□□□□ -1.47
VPS41-212ENST00000482217 ZBTB42B2RXF5 422 aa5.84□□□□□ -1.47
VPS41-212ENST00000482217 SORBS3O60504 671 aa5.84□□□□□ -1.47
VPS41-212ENST00000482217 GADD45BO75293 160 aaPredicted RBP5.84□□□□□ -1.47
VPS41-212ENST00000482217 NID1P14543 1247 aa5.84□□□□□ -1.47
VPS41-212ENST00000482217 COL13A1Q5TAT6 717 aaPredicted RBP5.84□□□□□ -1.47
VPS41-212ENST00000482217 PEAR1Q5VY43 1037 aaPredicted RBP5.84□□□□□ -1.47
VPS41-212ENST00000482217 CEP120Q8N960 986 aa5.84□□□□□ -1.47
VPS41-212ENST00000482217 PKNOX2Q96KN3 472 aa5.84□□□□□ -1.47
VPS41-212ENST00000482217 NSUN5Q96P11 429 aaKnown RBP5.84□□□□□ -1.47
VPS41-212ENST00000482217 RBSNQ9H1K0 784 aa5.84□□□□□ -1.47
VPS41-212ENST00000482217 PPP4R2Q9NY27 417 aa5.84□□□□□ -1.47
VPS41-212ENST00000482217 TRAK1Q9UPV9 953 aa5.84□□□□□ -1.47
VPS41-212ENST00000482217 AK5Q9Y6K8 562 aa5.84□□□□□ -1.47
VPS41-212ENST00000482217 RGS9O75916 674 aaPredicted RBP5.83□□□□□ -1.48
VPS41-212ENST00000482217 GHRHP01286 108 aa5.83□□□□□ -1.48
VPS41-212ENST00000482217 EIF4BP23588 611 aaKnown RBP5.83□□□□□ -1.48
VPS41-212ENST00000482217 COL9A3Q14050 684 aaPredicted RBP5.83□□□□□ -1.48
VPS41-212ENST00000482217 PSAPL1Q6NUJ1 521 aa5.83□□□□□ -1.48
VPS41-212ENST00000482217 FAM35AQ86V20 835 aa5.83□□□□□ -1.48
VPS41-212ENST00000482217 TTC9Q92623 222 aa5.83□□□□□ -1.48
VPS41-212ENST00000482217 C12orf49Q9H741 205 aa5.83□□□□□ -1.48
VPS41-212ENST00000482217 JPH1Q9HDC5 661 aaPredicted RBP5.83□□□□□ -1.48
VPS41-212ENST00000482217 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.83□□□□□ -1.48
VPS41-212ENST00000482217 MLLT1Q03111 559 aaPredicted RBP5.82□□□□□ -1.48
VPS41-212ENST00000482217 TRIM28Q13263 835 aaKnown RBP5.82□□□□□ -1.48
VPS41-212ENST00000482217 SUZ12Q15022 739 aaKnown RBP5.82□□□□□ -1.48
VPS41-212ENST00000482217 PRPF40BQ6NWY9 871 aaKnown RBP5.82□□□□□ -1.48
VPS41-212ENST00000482217 PI16Q6UXB8 463 aa5.82□□□□□ -1.48
VPS41-212ENST00000482217 TMEM102Q8N9M5 508 aaPredicted RBP5.82□□□□□ -1.48
VPS41-212ENST00000482217 NACC1Q96RE7 527 aa5.82□□□□□ -1.48
VPS41-212ENST00000482217 OSMRQ99650 979 aa5.82□□□□□ -1.48
VPS41-212ENST00000482217 SPOCK3Q9BQ16 436 aa5.82□□□□□ -1.48
VPS41-212ENST00000482217 ZKSCAN3Q9BRR0 538 aa5.82□□□□□ -1.48
VPS41-212ENST00000482217 BCO2Q9BYV7 579 aa5.82□□□□□ -1.48
VPS41-212ENST00000482217 EHD4Q9H223 541 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms