RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 CXXC1Q9P0U4 656 aaPredicted RBP5.61□□□□□ -1.51
KDM1A-204ENST00000481879 STIM2Q9P246 746 aa5.61□□□□□ -1.51
KDM1A-204ENST00000481879 TM4SF5O14894 197 aa5.6□□□□□ -1.51
KDM1A-204ENST00000481879 FSCN2O14926 492 aa5.6□□□□□ -1.51
KDM1A-204ENST00000481879 KIF4AO95239 1232 aa5.6□□□□□ -1.51
KDM1A-204ENST00000481879 TGFB1P01137 390 aa5.6□□□□□ -1.51
KDM1A-204ENST00000481879 DUOXA2Q1HG44 320 aa5.6□□□□□ -1.51
KDM1A-204ENST00000481879 UVSSAQ2YD98 709 aa5.6□□□□□ -1.51
KDM1A-204ENST00000481879 STK32AQ8WU08 396 aa5.6□□□□□ -1.51
KDM1A-204ENST00000481879 CARD10Q9BWT7 1032 aa5.6□□□□□ -1.51
KDM1A-204ENST00000481879 PBX4Q9BYU1 374 aa5.6□□□□□ -1.51
KDM1A-204ENST00000481879 ABI2Q9NYB9 513 aaPredicted RBP5.6□□□□□ -1.51
KDM1A-204ENST00000481879 OAS3Q9Y6K5 1087 aaKnown RBP5.6□□□□□ -1.51
KDM1A-204ENST00000481879 FAM177BA6PVY3 158 aa5.59□□□□□ -1.51
KDM1A-204ENST00000481879 KIAA1324LA8MWY0 1029 aaPredicted RBP5.59□□□□□ -1.51
KDM1A-204ENST00000481879 NFIAQ12857 509 aa5.59□□□□□ -1.51
KDM1A-204ENST00000481879 ADAMTSL4Q6UY14 1074 aa5.59□□□□□ -1.51
KDM1A-204ENST00000481879 KIAA1211Q6ZU35 1233 aa5.59□□□□□ -1.51
KDM1A-204ENST00000481879 NCAPG2Q86XI2 1143 aa5.59□□□□□ -1.51
KDM1A-204ENST00000481879 ZDHHC13Q8IUH4 622 aa5.59□□□□□ -1.51
KDM1A-204ENST00000481879 CEP120Q8N960 986 aa5.59□□□□□ -1.51
KDM1A-204ENST00000481879 UTP4Q969X6 686 aaKnown RBP5.59□□□□□ -1.51
KDM1A-204ENST00000481879 FAM46AQ96IP4 442 aaKnown RBP5.59□□□□□ -1.51
KDM1A-204ENST00000481879 SH2B1Q9NRF2 756 aaPredicted RBP5.59□□□□□ -1.51
KDM1A-204ENST00000481879 ZBTB39O15060 712 aa5.58□□□□□ -1.52
KDM1A-204ENST00000481879 DDX3YO15523 660 aaKnown RBP5.58□□□□□ -1.52
KDM1A-204ENST00000481879 CYP2E1P05181 493 aaPredicted RBP5.58□□□□□ -1.52
KDM1A-204ENST00000481879 PTPRAP18433 802 aa5.58□□□□□ -1.52
KDM1A-204ENST00000481879 EPHA1P21709 976 aa5.58□□□□□ -1.52
KDM1A-204ENST00000481879 GRIK1P39086 918 aa5.58□□□□□ -1.52
KDM1A-204ENST00000481879 RNF43Q68DV7 783 aa5.58□□□□□ -1.52
KDM1A-204ENST00000481879 INTS5Q6P9B9 1019 aaKnown RBP5.58□□□□□ -1.52
KDM1A-204ENST00000481879 TRIM42Q8IWZ5 723 aa5.58□□□□□ -1.52
KDM1A-204ENST00000481879 ABTB2Q8N961 1025 aa5.58□□□□□ -1.52
KDM1A-204ENST00000481879 POP1Q99575 1024 aaKnown RBP5.58□□□□□ -1.52
KDM1A-204ENST00000481879 ADAM19Q9H013 955 aa5.58□□□□□ -1.52
KDM1A-204ENST00000481879 C7orf69Q9H7B7 122 aa5.58□□□□□ -1.52
KDM1A-204ENST00000481879 SEC31BQ9NQW1 1179 aa5.58□□□□□ -1.52
KDM1A-204ENST00000481879 HMX2A2RU54 273 aa5.57□□□□□ -1.52
KDM1A-204ENST00000481879 GP2P55259 537 aaKnown RBP5.57□□□□□ -1.52
KDM1A-204ENST00000481879 SRPK2P78362 688 aaKnown RBP5.57□□□□□ -1.52
KDM1A-204ENST00000481879 PDE12Q6L8Q7 609 aaKnown RBP5.57□□□□□ -1.52
KDM1A-204ENST00000481879 CLEC10AQ8IUN9 316 aa5.57□□□□□ -1.52
KDM1A-204ENST00000481879 FOXD4L4Q8WXT5 416 aaPredicted RBP5.57□□□□□ -1.52
KDM1A-204ENST00000481879 KLHDC7BQ96G42 594 aa5.57□□□□□ -1.52
KDM1A-204ENST00000481879 MYRFLQ96LU7 910 aa5.57□□□□□ -1.52
KDM1A-204ENST00000481879 KRTAP9-8Q9BYQ0 159 aa5.57□□□□□ -1.52
KDM1A-204ENST00000481879 ELP3Q9H9T3 547 aa5.57□□□□□ -1.52
KDM1A-204ENST00000481879 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.56□□□□□ -1.52
KDM1A-204ENST00000481879 SART1O43290 800 aaKnown RBP5.56□□□□□ -1.52
KDM1A-204ENST00000481879 ADAM11O75078 769 aa5.56□□□□□ -1.52
KDM1A-204ENST00000481879 ATG7O95352 703 aa5.56□□□□□ -1.52
KDM1A-204ENST00000481879 CABP4P57796 275 aa5.56□□□□□ -1.52
KDM1A-204ENST00000481879 TMEM164Q5U3C3 297 aa5.56□□□□□ -1.52
KDM1A-204ENST00000481879 FAM20CQ8IXL6 584 aa5.56□□□□□ -1.52
KDM1A-204ENST00000481879 CCER1Q8TC90 406 aaPredicted RBP5.56□□□□□ -1.52
KDM1A-204ENST00000481879 UBASH3BQ8TF42 649 aa5.56□□□□□ -1.52
KDM1A-204ENST00000481879 CLP1Q92989 425 aaKnown RBP5.56□□□□□ -1.52
KDM1A-204ENST00000481879 WNT8BQ93098 351 aa5.56□□□□□ -1.52
KDM1A-204ENST00000481879 FAM83CQ9BQN1 747 aa5.56□□□□□ -1.52
KDM1A-204ENST00000481879 DBNDD2Q9BQY9 259 aa5.56□□□□□ -1.52
KDM1A-204ENST00000481879 TMEM63CQ9P1W3 806 aa5.56□□□□□ -1.52
KDM1A-204ENST00000481879 PRR19A6NJB7 356 aa5.55□□□□□ -1.52
KDM1A-204ENST00000481879 H3BRJ5 948 aa5.55□□□□□ -1.52
KDM1A-204ENST00000481879 RPLP1P05386 114 aaKnown RBP5.55□□□□□ -1.52
KDM1A-204ENST00000481879 BMP3P12645 472 aa5.55□□□□□ -1.52
KDM1A-204ENST00000481879 PIP4K2BP78356 416 aa5.55□□□□□ -1.52
KDM1A-204ENST00000481879 ZNF438Q7Z4V0 828 aa5.55□□□□□ -1.52
KDM1A-204ENST00000481879 NUDT16Q96DE0 195 aaKnown RBP5.55□□□□□ -1.52
KDM1A-204ENST00000481879 KCNF1Q9H3M0 494 aa5.55□□□□□ -1.52
KDM1A-204ENST00000481879 OSGEPQ9NPF4 335 aa5.55□□□□□ -1.52
KDM1A-204ENST00000481879 CNTN3Q9P232 1028 aa5.55□□□□□ -1.52
KDM1A-204ENST00000481879 SALL4Q9UJQ4 1053 aa5.55□□□□□ -1.52
KDM1A-204ENST00000481879 ADAMTS4O75173 837 aa5.54□□□□□ -1.52
KDM1A-204ENST00000481879 ANKRD34AQ69YU3 496 aa5.54□□□□□ -1.52
KDM1A-204ENST00000481879 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.54□□□□□ -1.52
KDM1A-204ENST00000481879 BEND4Q6ZU67 534 aa5.54□□□□□ -1.52
KDM1A-204ENST00000481879 DTX1Q86Y01 620 aa5.54□□□□□ -1.52
KDM1A-204ENST00000481879 RNF208Q9H0X6 261 aa5.54□□□□□ -1.52
KDM1A-204ENST00000481879 KANSL3Q9P2N6 904 aa5.54□□□□□ -1.52
KDM1A-204ENST00000481879 NFKBIEO00221 500 aa5.53□□□□□ -1.52
KDM1A-204ENST00000481879 SPINK2P20155 84 aa5.53□□□□□ -1.52
KDM1A-204ENST00000481879 CES1P23141 567 aa5.53□□□□□ -1.52
KDM1A-204ENST00000481879 ARL4DP49703 201 aa5.53□□□□□ -1.52
KDM1A-204ENST00000481879 XKR5Q6UX68 686 aa5.53□□□□□ -1.52
KDM1A-204ENST00000481879 ATCAYQ86WG3 371 aa5.53□□□□□ -1.52
KDM1A-204ENST00000481879 C1orf127Q8N9H9 656 aa5.53□□□□□ -1.52
KDM1A-204ENST00000481879 SHKBP1Q8TBC3 707 aa5.53□□□□□ -1.52
KDM1A-204ENST00000481879 RUSC1Q9BVN2 902 aa5.53□□□□□ -1.52
KDM1A-204ENST00000481879 ZMYND15Q9H091 742 aa5.53□□□□□ -1.52
KDM1A-204ENST00000481879 SEPT3Q9UH03 358 aa5.53□□□□□ -1.52
KDM1A-204ENST00000481879 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.53□□□□□ -1.52
KDM1A-204ENST00000481879 PDE2AO00408 941 aaPredicted RBP5.52□□□□□ -1.53
KDM1A-204ENST00000481879 WNT11O96014 354 aa5.52□□□□□ -1.53
KDM1A-204ENST00000481879 PCSK2P16519 638 aa5.52□□□□□ -1.53
KDM1A-204ENST00000481879 PREPP48147 710 aa5.52□□□□□ -1.53
KDM1A-204ENST00000481879 NLRP12P59046 1061 aa5.52□□□□□ -1.53
KDM1A-204ENST00000481879 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
KDM1A-204ENST00000481879 FDX2Q6P4F2 183 aa5.52□□□□□ -1.53
KDM1A-204ENST00000481879 TTC16Q8NEE8 873 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms