RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 BEGAINQ9BUH8 593 aa15.41■□□□□ 0.06
SQSTM1-207ENST00000481335 CA12O43570 354 aa15.4■□□□□ 0.06
SQSTM1-207ENST00000481335 USP17L8P0C7I0 530 aa15.4■□□□□ 0.06
SQSTM1-207ENST00000481335 STRIP1Q5VSL9 837 aa15.4■□□□□ 0.06
SQSTM1-207ENST00000481335 CYP4F22Q6NT55 531 aa15.4■□□□□ 0.06
SQSTM1-207ENST00000481335 SULF1Q8IWU6 871 aa15.4■□□□□ 0.06
SQSTM1-207ENST00000481335 ZNF804BA4D1E1 1349 aa15.4■□□□□ 0.06
SQSTM1-207ENST00000481335 GRM8O00222 908 aa15.39■□□□□ 0.05
SQSTM1-207ENST00000481335 EGFRP00533 1210 aa15.39■□□□□ 0.05
SQSTM1-207ENST00000481335 IFIT5Q13325 482 aaKnown RBP15.39■□□□□ 0.05
SQSTM1-207ENST00000481335 USP48Q86UV5 1035 aa15.39■□□□□ 0.05
SQSTM1-207ENST00000481335 MYOZ2Q9NPC6 264 aa15.39■□□□□ 0.05
SQSTM1-207ENST00000481335 GGA3Q9NZ52 723 aa15.39■□□□□ 0.05
SQSTM1-207ENST00000481335 E9PSI1 815 aa15.38■□□□□ 0.05
SQSTM1-207ENST00000481335 F6X3S4 739 aa15.38■□□□□ 0.05
SQSTM1-207ENST00000481335 BRPF1P55201 1214 aaPredicted RBP15.38■□□□□ 0.05
SQSTM1-207ENST00000481335 NOGQ13253 232 aa15.38■□□□□ 0.05
SQSTM1-207ENST00000481335 C15orf52Q6ZUT6 534 aaKnown RBP15.38■□□□□ 0.05
SQSTM1-207ENST00000481335 OGFOD1Q8N543 542 aa15.38■□□□□ 0.05
SQSTM1-207ENST00000481335 ZNF408Q9H9D4 720 aa15.38■□□□□ 0.05
SQSTM1-207ENST00000481335 PAPPA2Q9BXP8 1791 aa15.38■□□□□ 0.05
SQSTM1-207ENST00000481335 ECM29Q5VYK3 1845 aa15.38■□□□□ 0.05
SQSTM1-207ENST00000481335 CAPN15O75808 1086 aa15.37■□□□□ 0.05
SQSTM1-207ENST00000481335 HSPA8P11142 646 aaKnown RBP15.37■□□□□ 0.05
SQSTM1-207ENST00000481335 KCNJ4P48050 445 aa15.37■□□□□ 0.05
SQSTM1-207ENST00000481335 FKBP1BP68106 108 aa15.37■□□□□ 0.05
SQSTM1-207ENST00000481335 FOXO4P98177 505 aa15.37■□□□□ 0.05
SQSTM1-207ENST00000481335 CHRNDQ07001 517 aa15.37■□□□□ 0.05
SQSTM1-207ENST00000481335 DACT2Q5SW24 774 aa15.37■□□□□ 0.05
SQSTM1-207ENST00000481335 RBM26Q5T8P6 1007 aaKnown RBP15.37■□□□□ 0.05
SQSTM1-207ENST00000481335 C2orf69Q8N8R5 385 aa15.37■□□□□ 0.05
SQSTM1-207ENST00000481335 SRCIN1Q9C0H9 1055 aa15.37■□□□□ 0.05
SQSTM1-207ENST00000481335 GBA2Q9HCG7 927 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-207ENST00000481335 PTPRCP08575 1304 aa15.37■□□□□ 0.05
SQSTM1-207ENST00000481335 HUNKP57058 714 aa15.36■□□□□ 0.05
SQSTM1-207ENST00000481335 CCDC57Q2TAC2 916 aa15.36■□□□□ 0.05
SQSTM1-207ENST00000481335 C9orf78Q9NZ63 289 aaPredicted RBP15.36■□□□□ 0.05
SQSTM1-207ENST00000481335 ADM5C9JUS6 153 aa15.35■□□□□ 0.05
SQSTM1-207ENST00000481335 LBX1P52954 281 aa15.35■□□□□ 0.05
SQSTM1-207ENST00000481335 SCARF1Q14162 830 aa15.35■□□□□ 0.05
SQSTM1-207ENST00000481335 CCDC102AQ96A19 550 aa15.35■□□□□ 0.05
SQSTM1-207ENST00000481335 UTYO14607 1347 aa15.35■□□□□ 0.05
SQSTM1-207ENST00000481335 AKAP11Q9UKA4 1901 aa15.35■□□□□ 0.05
SQSTM1-207ENST00000481335 GRM1Q13255 1194 aa15.34■□□□□ 0.05
SQSTM1-207ENST00000481335 ANGEL2Q5VTE6 544 aaKnown RBP15.34■□□□□ 0.05
SQSTM1-207ENST00000481335 TTLL5Q6EMB2 1281 aa15.34■□□□□ 0.05
SQSTM1-207ENST00000481335 RGMBQ6NW40 437 aa15.34■□□□□ 0.05
SQSTM1-207ENST00000481335 LMBR1LQ6UX01 489 aa15.34■□□□□ 0.05
SQSTM1-207ENST00000481335 TXNRD3Q86VQ6 643 aa15.34■□□□□ 0.05
SQSTM1-207ENST00000481335 HDAC9Q9UKV0 1011 aa15.34■□□□□ 0.05
SQSTM1-207ENST00000481335 CHMP3Q9Y3E7 222 aa15.34■□□□□ 0.05
SQSTM1-207ENST00000481335 IRS2Q9Y4H2 1338 aa15.34■□□□□ 0.05
SQSTM1-207ENST00000481335 ARAP2Q8WZ64 1704 aa15.34■□□□□ 0.05
SQSTM1-207ENST00000481335 COL1A1P02452 1464 aaPredicted RBP15.33■□□□□ 0.05
SQSTM1-207ENST00000481335 WTIPA6NIX2 430 aaPredicted RBP15.33■□□□□ 0.04
SQSTM1-207ENST00000481335 TAF7LQ5H9L4 462 aa15.33■□□□□ 0.04
SQSTM1-207ENST00000481335 SLC4A10Q6U841 1118 aa15.33■□□□□ 0.04
SQSTM1-207ENST00000481335 ZNF804AQ7Z570 1209 aa15.33■□□□□ 0.04
SQSTM1-207ENST00000481335 CDCA5Q96FF9 252 aa15.33■□□□□ 0.04
SQSTM1-207ENST00000481335 CD209Q9NNX6 404 aa15.33■□□□□ 0.04
SQSTM1-207ENST00000481335 AOC2O75106 756 aa15.32■□□□□ 0.04
SQSTM1-207ENST00000481335 CT47B1P0C2W7 299 aaPredicted RBP15.32■□□□□ 0.04
SQSTM1-207ENST00000481335 FKBP1AP62942 108 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-207ENST00000481335 ALDH1L2Q3SY69 923 aa15.32■□□□□ 0.04
SQSTM1-207ENST00000481335 LDHAL6AQ6ZMR3 332 aa15.32■□□□□ 0.04
SQSTM1-207ENST00000481335 REM2Q8IYK8 340 aaPredicted RBP15.32■□□□□ 0.04
SQSTM1-207ENST00000481335 MRPL50Q8N5N7 158 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-207ENST00000481335 CCER2I3L3R5 266 aa15.31■□□□□ 0.04
SQSTM1-207ENST00000481335 WNT10BO00744 389 aa15.31■□□□□ 0.04
SQSTM1-207ENST00000481335 IL1R1P14778 569 aa15.31■□□□□ 0.04
SQSTM1-207ENST00000481335 SLFN5Q08AF3 891 aa15.31■□□□□ 0.04
SQSTM1-207ENST00000481335 RABL6Q3YEC7 729 aaPredicted RBP15.31■□□□□ 0.04
SQSTM1-207ENST00000481335 FBXW7Q969H0 707 aa15.31■□□□□ 0.04
SQSTM1-207ENST00000481335 CNNM1Q9NRU3 951 aa15.31■□□□□ 0.04
SQSTM1-207ENST00000481335 SAGE1Q9NXZ1 904 aa15.31■□□□□ 0.04
SQSTM1-207ENST00000481335 ASTN2O75129 1339 aaPredicted RBP15.31■□□□□ 0.04
SQSTM1-207ENST00000481335 FAM155AB1AL88 458 aaPredicted RBP15.3■□□□□ 0.04
SQSTM1-207ENST00000481335 SLC10A3P09131 477 aa15.3■□□□□ 0.04
SQSTM1-207ENST00000481335 KLRK1P26718 216 aa15.3■□□□□ 0.04
SQSTM1-207ENST00000481335 GTF2IP78347 998 aa15.3■□□□□ 0.04
SQSTM1-207ENST00000481335 UBE4AQ14139 1066 aa15.3■□□□□ 0.04
SQSTM1-207ENST00000481335 EPHA10Q5JZY3 1008 aa15.3■□□□□ 0.04
SQSTM1-207ENST00000481335 APOBEC3FQ8IUX4 373 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-207ENST00000481335 MTMR14Q8NCE2 650 aa15.3■□□□□ 0.04
SQSTM1-207ENST00000481335 MROH5Q6ZUA9 1318 aa15.29■□□□□ 0.04
SQSTM1-207ENST00000481335 TAF5LO75529 589 aa15.29■□□□□ 0.04
SQSTM1-207ENST00000481335 NF2P35240 595 aa15.29■□□□□ 0.04
SQSTM1-207ENST00000481335 ZNF157P51786 506 aaPredicted RBP15.29■□□□□ 0.04
SQSTM1-207ENST00000481335 NBPF9Q3BBW0 867 aa15.29■□□□□ 0.04
SQSTM1-207ENST00000481335 ZBED3Q96IU2 234 aaPredicted RBP15.29■□□□□ 0.04
SQSTM1-207ENST00000481335 CASP8AP2Q9UKL3 1982 aa15.28■□□□□ 0.04
SQSTM1-207ENST00000481335 NBPF7P0C2Y1 421 aaPredicted RBP15.28■□□□□ 0.04
SQSTM1-207ENST00000481335 DLK2Q6UY11 383 aa15.28■□□□□ 0.04
SQSTM1-207ENST00000481335 KIAA0825Q8IV33 1275 aa15.28■□□□□ 0.04
SQSTM1-207ENST00000481335 KAZALD1Q96I82 304 aa15.28■□□□□ 0.04
SQSTM1-207ENST00000481335 SUCLG2Q96I99 432 aa15.28■□□□□ 0.04
SQSTM1-207ENST00000481335 MXD3Q9BW11 206 aa15.28■□□□□ 0.04
SQSTM1-207ENST00000481335 LAMB1P07942 1786 aa15.27■□□□□ 0.04
SQSTM1-207ENST00000481335 TRMT2AQ8IZ69 625 aaKnown RBP15.27■□□□□ 0.04
SQSTM1-207ENST00000481335 HELBQ8NG08 1087 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms