RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 C16orf71Q8IYS4 520 aaPredicted RBP15.29■□□□□ 0.04
PTPRF-213ENST00000481019 SIL1Q9H173 461 aa15.29■□□□□ 0.04
PTPRF-213ENST00000481019 GPRC5DQ9NZD1 345 aa15.29■□□□□ 0.04
PTPRF-213ENST00000481019 EYA2O00167 538 aa15.28■□□□□ 0.04
PTPRF-213ENST00000481019 GNAI2P04899 355 aa15.28■□□□□ 0.04
PTPRF-213ENST00000481019 NEFLP07196 543 aa15.28■□□□□ 0.04
PTPRF-213ENST00000481019 VIL1P09327 827 aaKnown RBP15.28■□□□□ 0.04
PTPRF-213ENST00000481019 MTX1Q13505 466 aa15.28■□□□□ 0.04
PTPRF-213ENST00000481019 TNIP1Q15025 636 aa15.28■□□□□ 0.04
PTPRF-213ENST00000481019 EAPPQ56P03 285 aaPredicted RBP15.28■□□□□ 0.04
PTPRF-213ENST00000481019 C15orf52Q6ZUT6 534 aaKnown RBP15.28■□□□□ 0.04
PTPRF-213ENST00000481019 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.28■□□□□ 0.04
PTPRF-213ENST00000481019 MROH5Q6ZUA9 1318 aa15.27■□□□□ 0.04
PTPRF-213ENST00000481019 IQCA1LA6NCM1 817 aa15.27■□□□□ 0.04
PTPRF-213ENST00000481019 G3V3G9 751 aa15.27■□□□□ 0.04
PTPRF-213ENST00000481019 EGFRP00533 1210 aa15.27■□□□□ 0.04
PTPRF-213ENST00000481019 METTL24Q5JXM2 366 aa15.27■□□□□ 0.04
PTPRF-213ENST00000481019 DCAF8Q5TAQ9 597 aa15.27■□□□□ 0.04
PTPRF-213ENST00000481019 TRPM4Q8TD43 1214 aa15.27■□□□□ 0.04
PTPRF-213ENST00000481019 SRGAP3O43295 1099 aa15.26■□□□□ 0.03
PTPRF-213ENST00000481019 GYG1P46976 350 aa15.26■□□□□ 0.03
PTPRF-213ENST00000481019 HIRAP54198 1017 aaPredicted RBP15.26■□□□□ 0.03
PTPRF-213ENST00000481019 PODNQ7Z5L7 613 aa15.26■□□□□ 0.03
PTPRF-213ENST00000481019 MICALL2Q8IY33 904 aa15.26■□□□□ 0.03
PTPRF-213ENST00000481019 GMLQ99445 158 aa15.26■□□□□ 0.03
PTPRF-213ENST00000481019 COA1Q9GZY4 146 aa15.26■□□□□ 0.03
PTPRF-213ENST00000481019 CD209Q9NNX6 404 aa15.26■□□□□ 0.03
PTPRF-213ENST00000481019 CNOT7Q9UIV1 285 aaKnown RBP15.26■□□□□ 0.03
PTPRF-213ENST00000481019 COG6Q9Y2V7 657 aa15.26■□□□□ 0.03
PTPRF-213ENST00000481019 USP17L3A6NCW0 530 aa15.25■□□□□ 0.03
PTPRF-213ENST00000481019 USP17L4A6NCW7 530 aa15.25■□□□□ 0.03
PTPRF-213ENST00000481019 PDE8BO95263 885 aa15.25■□□□□ 0.03
PTPRF-213ENST00000481019 FGFR2P21802 821 aa15.25■□□□□ 0.03
PTPRF-213ENST00000481019 LMOD1P29536 600 aaPredicted RBP15.25■□□□□ 0.03
PTPRF-213ENST00000481019 UBE4AQ14139 1066 aa15.25■□□□□ 0.03
PTPRF-213ENST00000481019 DACT2Q5SW24 774 aa15.25■□□□□ 0.03
PTPRF-213ENST00000481019 RSBN1LQ6PCB5 846 aaPredicted RBP15.25■□□□□ 0.03
PTPRF-213ENST00000481019 USP17L1Q7RTZ2 530 aa15.25■□□□□ 0.03
PTPRF-213ENST00000481019 SMC1BQ8NDV3 1235 aa15.25■□□□□ 0.03
PTPRF-213ENST00000481019 FAM84BQ96KN1 310 aaPredicted RBP15.25■□□□□ 0.03
PTPRF-213ENST00000481019 COPRSQ9NQ92 184 aa15.25■□□□□ 0.03
PTPRF-213ENST00000481019 JAG2Q9Y219 1238 aa15.25■□□□□ 0.03
PTPRF-213ENST00000481019 HTRA3P83110 453 aa15.24■□□□□ 0.03
PTPRF-213ENST00000481019 FSTL1Q12841 308 aa15.24■□□□□ 0.03
PTPRF-213ENST00000481019 MVPQ14764 893 aaKnown RBP15.24■□□□□ 0.03
PTPRF-213ENST00000481019 CHADLQ6NUI6 762 aa15.24■□□□□ 0.03
PTPRF-213ENST00000481019 SAMD7Q7Z3H4 446 aa15.24■□□□□ 0.03
PTPRF-213ENST00000481019 LDHDQ86WU2 507 aa15.24■□□□□ 0.03
PTPRF-213ENST00000481019 DPF2Q92785 391 aa15.24■□□□□ 0.03
PTPRF-213ENST00000481019 FBXW7Q969H0 707 aa15.24■□□□□ 0.03
PTPRF-213ENST00000481019 CIAO1O76071 339 aa15.23■□□□□ 0.03
PTPRF-213ENST00000481019 IL1R1P14778 569 aa15.23■□□□□ 0.03
PTPRF-213ENST00000481019 GTF2IP78347 998 aa15.23■□□□□ 0.03
PTPRF-213ENST00000481019 FMR1Q06787 632 aaKnown RBP eCLIP15.23■□□□□ 0.03
PTPRF-213ENST00000481019 POLA2Q14181 598 aa15.23■□□□□ 0.03
PTPRF-213ENST00000481019 TBC1D10BQ4KMP7 808 aaPredicted RBP15.23■□□□□ 0.03
PTPRF-213ENST00000481019 MAP1SQ66K74 1059 aaPredicted RBP15.23■□□□□ 0.03
PTPRF-213ENST00000481019 CERS5Q8N5B7 392 aa15.23■□□□□ 0.03
PTPRF-213ENST00000481019 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.23■□□□□ 0.03
PTPRF-213ENST00000481019 ADARB2Q9NS39 739 aaKnown RBP15.23■□□□□ 0.03
PTPRF-213ENST00000481019 HDAC5Q9UQL6 1122 aa15.23■□□□□ 0.03
PTPRF-213ENST00000481019 ASTN2O75129 1339 aaPredicted RBP15.22■□□□□ 0.03
PTPRF-213ENST00000481019 HSPA6P17066 643 aa15.22■□□□□ 0.03
PTPRF-213ENST00000481019 RPS12P25398 132 aaKnown RBP15.22■□□□□ 0.03
PTPRF-213ENST00000481019 BCAMP50895 628 aa15.22■□□□□ 0.03
PTPRF-213ENST00000481019 ATP8B2P98198 1209 aa15.22■□□□□ 0.03
PTPRF-213ENST00000481019 FBXO33Q7Z6M2 555 aa15.22■□□□□ 0.03
PTPRF-213ENST00000481019 IQSEC3Q9UPP2 1182 aaPredicted RBP15.22■□□□□ 0.03
PTPRF-213ENST00000481019 CLEC11AQ9Y240 323 aa15.22■□□□□ 0.03
PTPRF-213ENST00000481019 ZNF609O15014 1411 aa15.22■□□□□ 0.03
PTPRF-213ENST00000481019 ITGBL1O95965 494 aaPredicted RBP15.21■□□□□ 0.03
PTPRF-213ENST00000481019 HIBADHP31937 336 aaKnown RBP15.21■□□□□ 0.03
PTPRF-213ENST00000481019 IL15P40933 162 aaPredicted RBP15.21■□□□□ 0.03
PTPRF-213ENST00000481019 ZNF280AP59817 542 aaPredicted RBP15.21■□□□□ 0.03
PTPRF-213ENST00000481019 TFCP2Q12800 502 aa15.21■□□□□ 0.03
PTPRF-213ENST00000481019 PUM3Q15397 648 aaKnown RBP15.21■□□□□ 0.03
PTPRF-213ENST00000481019 RBM26Q5T8P6 1007 aaKnown RBP15.21■□□□□ 0.03
PTPRF-213ENST00000481019 STRIP1Q5VSL9 837 aa15.21■□□□□ 0.03
PTPRF-213ENST00000481019 TTLL5Q6EMB2 1281 aa15.21■□□□□ 0.03
PTPRF-213ENST00000481019 CEP85Q6P2H3 762 aa15.21■□□□□ 0.03
PTPRF-213ENST00000481019 DLK2Q6UY11 383 aa15.21■□□□□ 0.03
PTPRF-213ENST00000481019 USP50Q70EL3 339 aaPredicted RBP15.21■□□□□ 0.03
PTPRF-213ENST00000481019 ZNF804AQ7Z570 1209 aa15.21■□□□□ 0.03
PTPRF-213ENST00000481019 PNMA8AQ86V59 439 aaPredicted RBP15.21■□□□□ 0.03
PTPRF-213ENST00000481019 TDRD7Q8NHU6 1098 aaKnown RBP15.21■□□□□ 0.03
PTPRF-213ENST00000481019 SSH3Q8TE77 659 aa15.21■□□□□ 0.03
PTPRF-213ENST00000481019 ZBTB40Q9NUA8 1239 aa15.21■□□□□ 0.03
PTPRF-213ENST00000481019 ADORA1P30542 326 aa15.2■□□□□ 0.02
PTPRF-213ENST00000481019 GRIK5Q16478 980 aa15.2■□□□□ 0.02
PTPRF-213ENST00000481019 SIRT2Q8IXJ6 389 aa15.2■□□□□ 0.02
PTPRF-213ENST00000481019 AGBL3Q8NEM8 1001 aa15.2■□□□□ 0.02
PTPRF-213ENST00000481019 FBXO3Q9UK99 471 aa15.2■□□□□ 0.02
PTPRF-213ENST00000481019 SUPT16HQ9Y5B9 1047 aaKnown RBP15.2■□□□□ 0.02
PTPRF-213ENST00000481019 COL1A1P02452 1464 aaPredicted RBP15.2■□□□□ 0.02
PTPRF-213ENST00000481019 PASKQ96RG2 1323 aa15.19■□□□□ 0.02
PTPRF-213ENST00000481019 H7C1D1 291 aa15.19■□□□□ 0.02
PTPRF-213ENST00000481019 SASH1O94885 1247 aa15.19■□□□□ 0.02
PTPRF-213ENST00000481019 MS4A1P11836 297 aa15.19■□□□□ 0.02
PTPRF-213ENST00000481019 PDE3AQ14432 1141 aa15.19■□□□□ 0.02
PTPRF-213ENST00000481019 ATP2B3Q16720 1220 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms