RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 CEP126Q9P2H0 1117 aa25.28■■□□□ 1.64
CTSA-206ENST00000480961 POTECB2RU33 542 aa25.27■■□□□ 1.64
CTSA-206ENST00000480961 CHMP4BQ9H444 224 aaKnown RBP25.27■■□□□ 1.64
CTSA-206ENST00000480961 FBXO3Q9UK99 471 aa25.27■■□□□ 1.64
CTSA-206ENST00000480961 DICER1Q9UPY3 1922 aaKnown RBP25.26■■□□□ 1.63
CTSA-206ENST00000480961 PSMD14O00487 310 aa25.26■■□□□ 1.63
CTSA-206ENST00000480961 GYG1P46976 350 aa25.26■■□□□ 1.63
CTSA-206ENST00000480961 TFCP2Q12800 502 aa25.26■■□□□ 1.63
CTSA-206ENST00000480961 G3BP1Q13283 466 aaKnown RBP eCLIP25.26■■□□□ 1.63
CTSA-206ENST00000480961 SIRT2Q8IXJ6 389 aa25.26■■□□□ 1.63
CTSA-206ENST00000480961 COA1Q9GZY4 146 aa25.26■■□□□ 1.63
CTSA-206ENST00000480961 SURF6O75683 361 aaKnown RBP25.25■■□□□ 1.63
CTSA-206ENST00000480961 TNIP1Q15025 636 aa25.25■■□□□ 1.63
CTSA-206ENST00000480961 PUM3Q15397 648 aaKnown RBP25.25■■□□□ 1.63
CTSA-206ENST00000480961 C15orf52Q6ZUT6 534 aaKnown RBP25.25■■□□□ 1.63
CTSA-206ENST00000480961 FBXW7Q969H0 707 aa25.25■■□□□ 1.63
CTSA-206ENST00000480961 ZBTB12Q9Y330 459 aaPredicted RBP25.25■■□□□ 1.63
CTSA-206ENST00000480961 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.25■■□□□ 1.63
CTSA-206ENST00000480961 KIF3CO14782 793 aa25.24■■□□□ 1.63
CTSA-206ENST00000480961 FGFR2P21802 821 aa25.24■■□□□ 1.63
CTSA-206ENST00000480961 GMPSP49915 693 aaPredicted RBP25.24■■□□□ 1.63
CTSA-206ENST00000480961 PODNQ7Z5L7 613 aa25.24■■□□□ 1.63
CTSA-206ENST00000480961 CD209Q9NNX6 404 aa25.24■■□□□ 1.63
CTSA-206ENST00000480961 VEGFAP15692 232 aaPredicted RBP25.23■■□□□ 1.63
CTSA-206ENST00000480961 OS9Q13438 667 aaPredicted RBP25.23■■□□□ 1.63
CTSA-206ENST00000480961 L3MBTL3Q96JM7 780 aaPredicted RBP25.23■■□□□ 1.63
CTSA-206ENST00000480961 FAM84BQ96KN1 310 aaPredicted RBP25.23■■□□□ 1.63
CTSA-206ENST00000480961 MXD3Q9BW11 206 aa25.23■■□□□ 1.63
CTSA-206ENST00000480961 ATP2B3Q16720 1220 aa25.22■■□□□ 1.63
CTSA-206ENST00000480961 ZNF804AQ7Z570 1209 aa25.22■■□□□ 1.63
CTSA-206ENST00000480961 RPAP2Q8IXW5 612 aaPredicted RBP25.22■■□□□ 1.63
CTSA-206ENST00000480961 JAG2Q9Y219 1238 aa25.22■■□□□ 1.63
CTSA-206ENST00000480961 USP17L3A6NCW0 530 aa25.21■■□□□ 1.63
CTSA-206ENST00000480961 USP17L4A6NCW7 530 aa25.21■■□□□ 1.63
CTSA-206ENST00000480961 SASH1O94885 1247 aa25.21■■□□□ 1.63
CTSA-206ENST00000480961 HIBADHP31937 336 aaKnown RBP25.21■■□□□ 1.63
CTSA-206ENST00000480961 BCAMP50895 628 aa25.21■■□□□ 1.63
CTSA-206ENST00000480961 SCNN1DP51172 638 aa25.21■■□□□ 1.63
CTSA-206ENST00000480961 TIMM10P62072 90 aa25.21■■□□□ 1.63
CTSA-206ENST00000480961 USP17L1Q7RTZ2 530 aa25.21■■□□□ 1.63
CTSA-206ENST00000480961 SHTN1A0MZ66 631 aa25.2■■□□□ 1.62
CTSA-206ENST00000480961 IFIT1P09914 478 aaKnown RBP25.2■■□□□ 1.62
CTSA-206ENST00000480961 SLC5A1P13866 664 aa25.2■■□□□ 1.62
CTSA-206ENST00000480961 EPS15P42566 896 aa25.2■■□□□ 1.62
CTSA-206ENST00000480961 GTF2IP78347 998 aa25.2■■□□□ 1.62
CTSA-206ENST00000480961 LPIN2Q92539 896 aa25.2■■□□□ 1.62
CTSA-206ENST00000480961 IQSEC3Q9UPP2 1182 aaPredicted RBP25.2■■□□□ 1.62
CTSA-206ENST00000480961 EXOC6BQ9Y2D4 811 aa25.2■■□□□ 1.62
CTSA-206ENST00000480961 VIL1P09327 827 aaKnown RBP25.19■■□□□ 1.62
CTSA-206ENST00000480961 ADORA1P30542 326 aa25.19■■□□□ 1.62
CTSA-206ENST00000480961 IRX6P78412 446 aaPredicted RBP25.19■■□□□ 1.62
CTSA-206ENST00000480961 FBXO33Q7Z6M2 555 aa25.19■■□□□ 1.62
CTSA-206ENST00000480961 VPS37DQ86XT2 251 aa25.19■■□□□ 1.62
CTSA-206ENST00000480961 HACL1Q9UJ83 578 aa25.19■■□□□ 1.62
CTSA-206ENST00000480961 NOP58Q9Y2X3 529 aaKnown RBP25.19■■□□□ 1.62
CTSA-206ENST00000480961 IL1R1P14778 569 aa25.18■■□□□ 1.62
CTSA-206ENST00000480961 CAVIN4Q5BKX8 364 aa25.18■■□□□ 1.62
CTSA-206ENST00000480961 TAF1DQ9H5J8 278 aaPredicted RBP25.18■■□□□ 1.62
CTSA-206ENST00000480961 IQCA1LA6NCM1 817 aa25.17■■□□□ 1.62
CTSA-206ENST00000480961 APBB1O00213 710 aa25.17■■□□□ 1.62
CTSA-206ENST00000480961 LMOD1P29536 600 aaPredicted RBP25.17■■□□□ 1.62
CTSA-206ENST00000480961 DACT2Q5SW24 774 aa25.17■■□□□ 1.62
CTSA-206ENST00000480961 TTLL5Q6EMB2 1281 aa25.17■■□□□ 1.62
CTSA-206ENST00000480961 RSBN1LQ6PCB5 846 aaPredicted RBP25.17■■□□□ 1.62
CTSA-206ENST00000480961 C16orf71Q8IYS4 520 aaPredicted RBP25.17■■□□□ 1.62
CTSA-206ENST00000480961 GPRC5DQ9NZD1 345 aa25.17■■□□□ 1.62
CTSA-206ENST00000480961 PCDHB15Q9Y5E8 787 aa25.17■■□□□ 1.62
CTSA-206ENST00000480961 A0A1B0GUL6 1792 aa25.16■■□□□ 1.62
CTSA-206ENST00000480961 HMMRO75330 724 aa25.16■■□□□ 1.62
CTSA-206ENST00000480961 POTEIP0CG38 1075 aa25.16■■□□□ 1.62
CTSA-206ENST00000480961 POTEJP0CG39 1038 aa25.16■■□□□ 1.62
CTSA-206ENST00000480961 EPHX2P34913 555 aa25.16■■□□□ 1.62
CTSA-206ENST00000480961 EXOC6Q8TAG9 804 aa25.16■■□□□ 1.62
CTSA-206ENST00000480961 NEUROD6Q96NK8 337 aa25.16■■□□□ 1.62
CTSA-206ENST00000480961 CNOT7Q9UIV1 285 aaKnown RBP25.16■■□□□ 1.62
CTSA-206ENST00000480961 A0A1B0GUL7 405 aa25.15■■□□□ 1.62
CTSA-206ENST00000480961 EAPPQ56P03 285 aaPredicted RBP25.15■■□□□ 1.62
CTSA-206ENST00000480961 STRIP1Q5VSL9 837 aa25.15■■□□□ 1.62
CTSA-206ENST00000480961 TDRD7Q8NHU6 1098 aaKnown RBP25.15■■□□□ 1.62
CTSA-206ENST00000480961 AKAP2Q9Y2D5 859 aa25.15■■□□□ 1.62
CTSA-206ENST00000480961 CHAF1AQ13111 956 aaPredicted RBP25.14■■□□□ 1.62
CTSA-206ENST00000480961 MICALL2Q8IY33 904 aa25.14■■□□□ 1.62
CTSA-206ENST00000480961 BCL11AQ9H165 835 aa25.14■■□□□ 1.62
CTSA-206ENST00000480961 WDR90Q96KV7 1748 aa25.14■■□□□ 1.61
CTSA-206ENST00000480961 FRAT2O75474 233 aaPredicted RBP25.13■■□□□ 1.61
CTSA-206ENST00000480961 XAGE2Q96GT9 111 aa25.13■■□□□ 1.61
CTSA-206ENST00000480961 SCN9AQ15858 1988 aa25.13■■□□□ 1.61
CTSA-206ENST00000480961 RPS12P25398 132 aaKnown RBP25.12■■□□□ 1.61
CTSA-206ENST00000480961 PHKA1P46020 1223 aa25.12■■□□□ 1.61
CTSA-206ENST00000480961 RBM26Q5T8P6 1007 aaKnown RBP25.12■■□□□ 1.61
CTSA-206ENST00000480961 DPF2Q92785 391 aa25.12■■□□□ 1.61
CTSA-206ENST00000480961 GMLQ99445 158 aa25.12■■□□□ 1.61
CTSA-206ENST00000480961 H7C1D1 291 aa25.11■■□□□ 1.61
CTSA-206ENST00000480961 CERS5Q8N5B7 392 aa25.11■■□□□ 1.61
CTSA-206ENST00000480961 TOMM70O94826 608 aa25.1■■□□□ 1.61
CTSA-206ENST00000480961 TBC1D10BQ4KMP7 808 aaPredicted RBP25.1■■□□□ 1.61
CTSA-206ENST00000480961 TNNI3KQ59H18 835 aa25.1■■□□□ 1.61
CTSA-206ENST00000480961 SAMD7Q7Z3H4 446 aa25.1■■□□□ 1.61
CTSA-206ENST00000480961 AGBL3Q8NEM8 1001 aa25.1■■□□□ 1.61
CTSA-206ENST00000480961 TRPM4Q8TD43 1214 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms