RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 RIMBP2O15034 1052 aa33.31■■■□□ 2.92
CCM2-211ENST00000478582 HELBQ8NG08 1087 aaPredicted RBP33.31■■■□□ 2.92
CCM2-211ENST00000478582 ZNF804BA4D1E1 1349 aa33.3■■■□□ 2.92
CCM2-211ENST00000478582 WTIPA6NIX2 430 aaPredicted RBP33.3■■■□□ 2.92
CCM2-211ENST00000478582 TAF5LO75529 589 aa33.3■■■□□ 2.92
CCM2-211ENST00000478582 TNIP1Q15025 636 aa33.3■■■□□ 2.92
CCM2-211ENST00000478582 ATG9AQ7Z3C6 839 aa33.3■■■□□ 2.92
CCM2-211ENST00000478582 ZC3H12CQ9C0D7 883 aaKnown RBP33.3■■■□□ 2.92
CCM2-211ENST00000478582 PA2G4Q9UQ80 394 aaKnown RBP33.3■■■□□ 2.92
CCM2-211ENST00000478582 YDJCA8MPS7 323 aa33.29■■■□□ 2.92
CCM2-211ENST00000478582 RAD17O75943 681 aa33.29■■■□□ 2.92
CCM2-211ENST00000478582 EPS15P42566 896 aa33.29■■■□□ 2.92
CCM2-211ENST00000478582 RPAP2Q8IXW5 612 aaPredicted RBP33.29■■■□□ 2.92
CCM2-211ENST00000478582 DNAJC5GQ8N7S2 189 aa33.29■■■□□ 2.92
CCM2-211ENST00000478582 VGLL2Q8N8G2 317 aa33.28■■■□□ 2.92
CCM2-211ENST00000478582 CLEC11AQ9Y240 323 aa33.28■■■□□ 2.92
CCM2-211ENST00000478582 MED23Q9ULK4 1368 aa33.28■■■□□ 2.92
CCM2-211ENST00000478582 A0A1B0GUL6 1792 aa33.28■■■□□ 2.92
CCM2-211ENST00000478582 IL15P40933 162 aaPredicted RBP33.27■■■□□ 2.92
CCM2-211ENST00000478582 HTRA3P83110 453 aa33.27■■■□□ 2.92
CCM2-211ENST00000478582 METTL24Q5JXM2 366 aa33.27■■■□□ 2.92
CCM2-211ENST00000478582 C15orf52Q6ZUT6 534 aaKnown RBP33.27■■■□□ 2.92
CCM2-211ENST00000478582 GPR101Q96P66 508 aaPredicted RBP33.27■■■□□ 2.92
CCM2-211ENST00000478582 DBNDD1Q9H9R9 158 aa33.27■■■□□ 2.92
CCM2-211ENST00000478582 PDE8BO95263 885 aa33.26■■■□□ 2.91
CCM2-211ENST00000478582 UBE4AQ14139 1066 aa33.26■■■□□ 2.91
CCM2-211ENST00000478582 SIL1Q9H173 461 aa33.26■■■□□ 2.91
CCM2-211ENST00000478582 GPRC5DQ9NZD1 345 aa33.26■■■□□ 2.91
CCM2-211ENST00000478582 ADAMTSL1Q8N6G6 1762 aa33.26■■■□□ 2.91
CCM2-211ENST00000478582 KCNJ4P48050 445 aa33.25■■■□□ 2.91
CCM2-211ENST00000478582 CRBNQ96SW2 442 aa33.25■■■□□ 2.91
CCM2-211ENST00000478582 GMPSP49915 693 aaPredicted RBP33.24■■■□□ 2.91
CCM2-211ENST00000478582 DOK7Q18PE1 504 aa33.24■■■□□ 2.91
CCM2-211ENST00000478582 IRS2Q9Y4H2 1338 aa33.24■■■□□ 2.91
CCM2-211ENST00000478582 SNAP23O00161 211 aa33.23■■■□□ 2.91
CCM2-211ENST00000478582 ECE2O60344 883 aa33.23■■■□□ 2.91
CCM2-211ENST00000478582 USP50Q70EL3 339 aaPredicted RBP33.23■■■□□ 2.91
CCM2-211ENST00000478582 NOP58Q9Y2X3 529 aaKnown RBP33.22■■■□□ 2.91
CCM2-211ENST00000478582 ITGBL1O95965 494 aaPredicted RBP33.21■■■□□ 2.91
CCM2-211ENST00000478582 TXNRD3Q86VQ6 643 aa33.21■■■□□ 2.91
CCM2-211ENST00000478582 SIRT2Q8IXJ6 389 aa33.21■■■□□ 2.91
CCM2-211ENST00000478582 ADARB2Q9NS39 739 aaKnown RBP33.21■■■□□ 2.91
CCM2-211ENST00000478582 CEP126Q9P2H0 1117 aa33.21■■■□□ 2.91
CCM2-211ENST00000478582 G3V3G9 751 aa33.2■■■□□ 2.91
CCM2-211ENST00000478582 DCAF8Q5TAQ9 597 aa33.2■■■□□ 2.91
CCM2-211ENST00000478582 PASKQ96RG2 1323 aa33.2■■■□□ 2.91
CCM2-211ENST00000478582 PSMD14O00487 310 aa33.19■■■□□ 2.9
CCM2-211ENST00000478582 HMMRO75330 724 aa33.19■■■□□ 2.9
CCM2-211ENST00000478582 G3BP1Q13283 466 aaKnown RBP eCLIP33.19■■■□□ 2.9
CCM2-211ENST00000478582 CNTROBQ8N137 903 aa33.19■■■□□ 2.9
CCM2-211ENST00000478582 FGFR2P21802 821 aa33.18■■■□□ 2.9
CCM2-211ENST00000478582 KLRK1P26718 216 aa33.18■■■□□ 2.9
CCM2-211ENST00000478582 AAMPQ13685 434 aa33.18■■■□□ 2.9
CCM2-211ENST00000478582 PUM3Q15397 648 aaKnown RBP33.18■■■□□ 2.9
CCM2-211ENST00000478582 MAP1SQ66K74 1059 aaPredicted RBP33.18■■■□□ 2.9
CCM2-211ENST00000478582 KLRG1Q96E93 195 aa33.18■■■□□ 2.9
CCM2-211ENST00000478582 COA1Q9GZY4 146 aa33.18■■■□□ 2.9
CCM2-211ENST00000478582 KCNQ5Q9NR82 932 aa33.18■■■□□ 2.9
CCM2-211ENST00000478582 SURF6O75683 361 aaKnown RBP33.17■■■□□ 2.9
CCM2-211ENST00000478582 PODNQ7Z5L7 613 aa33.17■■■□□ 2.9
CCM2-211ENST00000478582 DPF2Q92785 391 aa33.17■■■□□ 2.9
CCM2-211ENST00000478582 CNOT7Q9UIV1 285 aaKnown RBP33.16■■■□□ 2.9
CCM2-211ENST00000478582 LPIN2Q92539 896 aa33.15■■■□□ 2.9
CCM2-211ENST00000478582 ZBTB12Q9Y330 459 aaPredicted RBP33.15■■■□□ 2.9
CCM2-211ENST00000478582 CREBZFQ9NS37 354 aa33.14■■■□□ 2.9
CCM2-211ENST00000478582 H7C1D1 291 aa33.13■■■□□ 2.89
CCM2-211ENST00000478582 SASH1O94885 1247 aa33.13■■■□□ 2.89
CCM2-211ENST00000478582 IFIT1P09914 478 aaKnown RBP33.13■■■□□ 2.89
CCM2-211ENST00000478582 RPS12P25398 132 aaKnown RBP33.13■■■□□ 2.89
CCM2-211ENST00000478582 TFCP2Q12800 502 aa33.13■■■□□ 2.89
CCM2-211ENST00000478582 SCN9AQ15858 1988 aa33.12■■■□□ 2.89
CCM2-211ENST00000478582 VIL1P09327 827 aaKnown RBP33.12■■■□□ 2.89
CCM2-211ENST00000478582 ZNF804AQ7Z570 1209 aa33.12■■■□□ 2.89
CCM2-211ENST00000478582 SLC5A1P13866 664 aa33.11■■■□□ 2.89
CCM2-211ENST00000478582 ATP2B3Q16720 1220 aa33.11■■■□□ 2.89
CCM2-211ENST00000478582 MICALL2Q8IY33 904 aa33.11■■■□□ 2.89
CCM2-211ENST00000478582 FAM84BQ96KN1 310 aaPredicted RBP33.11■■■□□ 2.89
CCM2-211ENST00000478582 CD209Q9NNX6 404 aa33.11■■■□□ 2.89
CCM2-211ENST00000478582 AKAP2Q9Y2D5 859 aa33.11■■■□□ 2.89
CCM2-211ENST00000478582 HSP90AB4PQ58FF6 505 aa33.1■■■□□ 2.89
CCM2-211ENST00000478582 FBXO33Q7Z6M2 555 aa33.1■■■□□ 2.89
CCM2-211ENST00000478582 PCDHB15Q9Y5E8 787 aa33.1■■■□□ 2.89
CCM2-211ENST00000478582 SHTN1A0MZ66 631 aa33.09■■■□□ 2.89
CCM2-211ENST00000478582 IL1R1P14778 569 aa33.09■■■□□ 2.89
CCM2-211ENST00000478582 OS9Q13438 667 aaPredicted RBP33.09■■■□□ 2.89
CCM2-211ENST00000478582 EXOC6Q8TAG9 804 aa33.09■■■□□ 2.89
CCM2-211ENST00000478582 PGAP2Q9UHJ9 254 aa33.09■■■□□ 2.89
CCM2-211ENST00000478582 HIBADHP31937 336 aaKnown RBP33.08■■■□□ 2.89
CCM2-211ENST00000478582 HIRAP54198 1017 aaPredicted RBP33.08■■■□□ 2.89
CCM2-211ENST00000478582 GPR108Q9NPR9 543 aa33.08■■■□□ 2.89
CCM2-211ENST00000478582 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.08■■■□□ 2.89
CCM2-211ENST00000478582 TMEM88BA6NKF7 163 aa33.07■■■□□ 2.88
CCM2-211ENST00000478582 GYG1P46976 350 aa33.07■■■□□ 2.88
CCM2-211ENST00000478582 CAVIN4Q5BKX8 364 aa33.07■■■□□ 2.88
CCM2-211ENST00000478582 ERC1Q8IUD2 1116 aa33.07■■■□□ 2.88
CCM2-211ENST00000478582 JMYQ8N9B5 988 aa33.07■■■□□ 2.88
CCM2-211ENST00000478582 TRPM4Q8TD43 1214 aa33.07■■■□□ 2.88
CCM2-211ENST00000478582 ZC3H15Q8WU90 426 aaKnown RBP33.07■■■□□ 2.88
CCM2-211ENST00000478582 EXOC6BQ9Y2D4 811 aa33.07■■■□□ 2.88
CCM2-211ENST00000478582 PSME4Q14997 1843 aa33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms