RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ANP32EQ9BTT0 268 aa4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 JPH1Q9HDC5 661 aaPredicted RBP4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 KANSL3Q9P2N6 904 aa4.84□□□□□ -1.63
FNDC3B-209ENST00000478016 CLSPNQ9HAW4 1339 aa4.83□□□□□ -1.64
FNDC3B-209ENST00000478016 RNF225M0QZC1 329 aaPredicted RBP4.83□□□□□ -1.64
FNDC3B-209ENST00000478016 GNB5O14775 395 aa4.83□□□□□ -1.64
FNDC3B-209ENST00000478016 EREGO14944 169 aa4.83□□□□□ -1.64
FNDC3B-209ENST00000478016 EDN3P14138 238 aa4.83□□□□□ -1.64
FNDC3B-209ENST00000478016 LINC00114Q6XXX2 140 aa4.83□□□□□ -1.64
FNDC3B-209ENST00000478016 TTC9Q92623 222 aa4.83□□□□□ -1.64
FNDC3B-209ENST00000478016 ASB16Q96NS5 453 aa4.83□□□□□ -1.64
FNDC3B-209ENST00000478016 NIF3L1Q9GZT8 377 aa4.83□□□□□ -1.64
FNDC3B-209ENST00000478016 SMG9Q9H0W8 520 aaKnown RBP4.83□□□□□ -1.64
FNDC3B-209ENST00000478016 ZFYVE28Q9HCC9 887 aa4.83□□□□□ -1.64
FNDC3B-209ENST00000478016 IGSF5Q9NSI5 407 aa4.83□□□□□ -1.64
FNDC3B-209ENST00000478016 SALL4Q9UJQ4 1053 aa4.83□□□□□ -1.64
FNDC3B-209ENST00000478016 CNTNAP5Q8WYK1 1306 aa4.82□□□□□ -1.64
FNDC3B-209ENST00000478016 PLEKHD1A6NEE1 506 aa4.82□□□□□ -1.64
FNDC3B-209ENST00000478016 EIF1AYO14602 144 aaKnown RBP4.82□□□□□ -1.64
FNDC3B-209ENST00000478016 TREHO43280 583 aa4.82□□□□□ -1.64
FNDC3B-209ENST00000478016 CPNE3O75131 537 aaKnown RBP4.82□□□□□ -1.64
FNDC3B-209ENST00000478016 PLCB3Q01970 1234 aa4.82□□□□□ -1.64
FNDC3B-209ENST00000478016 ORC1Q13415 861 aa4.82□□□□□ -1.64
FNDC3B-209ENST00000478016 CEP120Q8N960 986 aa4.82□□□□□ -1.64
FNDC3B-209ENST00000478016 DNAJC25Q9H1X3 360 aa4.82□□□□□ -1.64
FNDC3B-209ENST00000478016 SPDYE3A6NKU9 549 aa4.81□□□□□ -1.64
FNDC3B-209ENST00000478016 SMNDC1O75940 238 aaKnown RBP eCLIP4.81□□□□□ -1.64
FNDC3B-209ENST00000478016 NID1P14543 1247 aa4.81□□□□□ -1.64
FNDC3B-209ENST00000478016 PTMSP20962 102 aa4.81□□□□□ -1.64
FNDC3B-209ENST00000478016 AFF1P51825 1210 aaKnown RBP4.81□□□□□ -1.64
FNDC3B-209ENST00000478016 RBM10P98175 930 aaKnown RBP4.81□□□□□ -1.64
FNDC3B-209ENST00000478016 ATP11AP98196 1134 aa4.81□□□□□ -1.64
FNDC3B-209ENST00000478016 DSC3Q14574 896 aa4.81□□□□□ -1.64
FNDC3B-209ENST00000478016 C8orf86Q6ZUL3 223 aa4.81□□□□□ -1.64
FNDC3B-209ENST00000478016 EXOC8Q8IYI6 725 aa4.81□□□□□ -1.64
FNDC3B-209ENST00000478016 PBX4Q9BYU1 374 aa4.81□□□□□ -1.64
FNDC3B-209ENST00000478016 NOP53Q9NZM5 478 aaKnown RBP4.81□□□□□ -1.64
FNDC3B-209ENST00000478016 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.81□□□□□ -1.64
FNDC3B-209ENST00000478016 POLR3DP05423 398 aaPredicted RBP4.8□□□□□ -1.64
FNDC3B-209ENST00000478016 ANAPC15P60006 121 aa4.8□□□□□ -1.64
FNDC3B-209ENST00000478016 COL9A3Q14050 684 aaPredicted RBP4.8□□□□□ -1.64
FNDC3B-209ENST00000478016 GRIK5Q16478 980 aa4.8□□□□□ -1.64
FNDC3B-209ENST00000478016 HSP90AB4PQ58FF6 505 aa4.8□□□□□ -1.64
FNDC3B-209ENST00000478016 CEP135Q66GS9 1140 aa4.8□□□□□ -1.64
FNDC3B-209ENST00000478016 GALNT12Q8IXK2 581 aa4.8□□□□□ -1.64
FNDC3B-209ENST00000478016 CACTIN-AS1Q8N1I8 211 aa4.8□□□□□ -1.64
FNDC3B-209ENST00000478016 TRIM11Q96F44 468 aa4.8□□□□□ -1.64
FNDC3B-209ENST00000478016 CSRNP1Q96S65 589 aa4.8□□□□□ -1.64
FNDC3B-209ENST00000478016 DNAJC2Q99543 621 aaKnown RBP4.8□□□□□ -1.64
FNDC3B-209ENST00000478016 PLVAPQ9BX97 442 aa4.8□□□□□ -1.64
FNDC3B-209ENST00000478016 RASSF4Q9H2L5 321 aa4.8□□□□□ -1.64
FNDC3B-209ENST00000478016 DZANK1Q9NVP4 752 aa4.8□□□□□ -1.64
FNDC3B-209ENST00000478016 LOC102724159A0A0B4J2E5 919 aa4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 A0A0U1RQG5 324 aaPredicted RBP4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 ANKRD33BA6NCL7 494 aa4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 FAM177BA6PVY3 158 aa4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 ACPPP15309 386 aa4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 IRS1P35568 1242 aa4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 FMR1Q06787 632 aaKnown RBP eCLIP4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 PWP2Q15269 919 aaKnown RBP4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 ENOX2Q16206 610 aaKnown RBP4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 USPL1Q5W0Q7 1092 aa4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 MSL1Q68DK7 614 aa4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 GDF6Q6KF10 455 aaPredicted RBP4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 WFDC8Q8IUA0 241 aa4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 CCDC74AQ96AQ1 378 aa4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 OSMRQ99650 979 aa4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 ZKSCAN3Q9BRR0 538 aa4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 LATS2Q9NRM7 1088 aa4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 TRIM33Q9UPN9 1127 aa4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 RIPOR2Q9Y4F9 1068 aa4.79□□□□□ -1.64
FNDC3B-209ENST00000478016 PNMA6FA0A0J9YX94 578 aa4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 NFKBIEO00221 500 aa4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 PDE2AO00408 941 aaPredicted RBP4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 NEFMP07197 916 aa4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 PTPRAP18433 802 aa4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 MAPK8P45983 427 aa4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 COL19A1Q14993 1142 aa4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 TRAPPC3LQ5T215 181 aa4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 PEAR1Q5VY43 1037 aaPredicted RBP4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 DNAJC14Q6Y2X3 702 aaPredicted RBP4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 ALYREFQ86V81 257 aaKnown RBP4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 IL22RA1Q8N6P7 574 aa4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 TMEM102Q8N9M5 508 aaPredicted RBP4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 POP1Q99575 1024 aaKnown RBP4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 SUV39H2Q9H5I1 410 aa4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 NPHS2Q9NP85 383 aa4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 RB1CC1Q8TDY2 1594 aa4.78□□□□□ -1.64
FNDC3B-209ENST00000478016 A0A1W2PP55 124 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 TRPA1O75762 1119 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 P4HBP07237 508 aaKnown RBP4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 ERCC3P19447 782 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 CDC27P30260 824 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 BAG6P46379 1132 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 RAC1P63000 192 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 ATP2B2Q01814 1243 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 KCNMA1Q12791 1236 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 PRRT3Q5FWE3 981 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 KIAA0319Q5VV43 1072 aa4.77□□□□□ -1.65
FNDC3B-209ENST00000478016 ILDR2Q71H61 639 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms