RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 EGFL7Q9UHF1 273 aa8.95□□□□□ -0.98
LTN1-204ENST00000475344 SALL4Q9UJQ4 1053 aa8.95□□□□□ -0.98
LTN1-204ENST00000475344 DLL1O00548 723 aa8.94□□□□□ -0.98
LTN1-204ENST00000475344 CACTIN-AS1Q8N1I8 211 aa8.94□□□□□ -0.98
LTN1-204ENST00000475344 SNX29Q8TEQ0 813 aa8.94□□□□□ -0.98
LTN1-204ENST00000475344 WFDC12Q8WWY7 111 aa8.94□□□□□ -0.98
LTN1-204ENST00000475344 TP53INP1Q96A56 240 aa8.94□□□□□ -0.98
LTN1-204ENST00000475344 POP1Q99575 1024 aaKnown RBP8.94□□□□□ -0.98
LTN1-204ENST00000475344 CARD10Q9BWT7 1032 aa8.94□□□□□ -0.98
LTN1-204ENST00000475344 MUC3BQ9H195 1237 aa8.94□□□□□ -0.98
LTN1-204ENST00000475344 BRPF3Q9ULD4 1205 aa8.94□□□□□ -0.98
LTN1-204ENST00000475344 PTPRAP18433 802 aa8.93□□□□□ -0.98
LTN1-204ENST00000475344 RSPO4Q2I0M5 234 aaPredicted RBP8.93□□□□□ -0.98
LTN1-204ENST00000475344 FAM117BQ6P1L5 589 aa8.93□□□□□ -0.98
LTN1-204ENST00000475344 ALX3O95076 343 aa8.92□□□□□ -0.98
LTN1-204ENST00000475344 EPHA1P21709 976 aa8.92□□□□□ -0.98
LTN1-204ENST00000475344 NOS3P29474 1203 aa8.92□□□□□ -0.98
LTN1-204ENST00000475344 MAP4K3Q8IVH8 894 aa8.92□□□□□ -0.98
LTN1-204ENST00000475344 GJD3Q8N144 294 aa8.92□□□□□ -0.98
LTN1-204ENST00000475344 HHIPQ96QV1 700 aa8.92□□□□□ -0.98
LTN1-204ENST00000475344 OSMRQ99650 979 aa8.92□□□□□ -0.98
LTN1-204ENST00000475344 SRA1Q9HD15 236 aaKnown RBP8.92□□□□□ -0.98
LTN1-204ENST00000475344 GALNT11Q8NCW6 608 aa8.91□□□□□ -0.98
LTN1-204ENST00000475344 MRPL18Q9H0U6 180 aaKnown RBP8.91□□□□□ -0.98
LTN1-204ENST00000475344 DZANK1Q9NVP4 752 aa8.91□□□□□ -0.98
LTN1-204ENST00000475344 PDE2AO00408 941 aaPredicted RBP8.9□□□□□ -0.98
LTN1-204ENST00000475344 NDUFB5O43674 189 aa8.9□□□□□ -0.98
LTN1-204ENST00000475344 POLR3DP05423 398 aaPredicted RBP8.9□□□□□ -0.98
LTN1-204ENST00000475344 CABP4P57796 275 aa8.9□□□□□ -0.98
LTN1-204ENST00000475344 NKAPLQ5M9Q1 402 aa8.9□□□□□ -0.98
LTN1-204ENST00000475344 TXNDC2Q86VQ3 553 aa8.9□□□□□ -0.98
LTN1-204ENST00000475344 AGGF1Q8N302 714 aaeCLIP8.9□□□□□ -0.98
LTN1-204ENST00000475344 CCER1Q8TC90 406 aaPredicted RBP8.9□□□□□ -0.98
LTN1-204ENST00000475344 DCAF11Q8TEB1 546 aa8.9□□□□□ -0.98
LTN1-204ENST00000475344 ZKSCAN3Q9BRR0 538 aa8.9□□□□□ -0.98
LTN1-204ENST00000475344 AKTIPQ9H8T0 292 aa8.9□□□□□ -0.98
LTN1-204ENST00000475344 AMOTL2Q9Y2J4 779 aa8.9□□□□□ -0.98
LTN1-204ENST00000475344 FSCN2O14926 492 aa8.89□□□□□ -0.99
LTN1-204ENST00000475344 DYRK3O43781 588 aa8.89□□□□□ -0.99
LTN1-204ENST00000475344 EDN3P14138 238 aa8.89□□□□□ -0.99
LTN1-204ENST00000475344 TMC1Q8TDI8 760 aa8.89□□□□□ -0.99
LTN1-204ENST00000475344 ASAP3Q8TDY4 903 aa8.89□□□□□ -0.99
LTN1-204ENST00000475344 SLC7A3Q8WY07 619 aa8.89□□□□□ -0.99
LTN1-204ENST00000475344 LATS2Q9NRM7 1088 aa8.89□□□□□ -0.99
LTN1-204ENST00000475344 NFKBIEO00221 500 aa8.88□□□□□ -0.99
LTN1-204ENST00000475344 CD68P34810 354 aaPredicted RBP8.88□□□□□ -0.99
LTN1-204ENST00000475344 MEGF10Q96KG7 1140 aa8.88□□□□□ -0.99
LTN1-204ENST00000475344 F8W735 103 aaPredicted RBP8.87□□□□□ -0.99
LTN1-204ENST00000475344 H3BRJ5 948 aa8.87□□□□□ -0.99
LTN1-204ENST00000475344 ARHGAP4P98171 946 aa8.87□□□□□ -0.99
LTN1-204ENST00000475344 ECM1Q16610 540 aa8.87□□□□□ -0.99
LTN1-204ENST00000475344 FOXD4L6Q3SYB3 417 aaPredicted RBP8.87□□□□□ -0.99
LTN1-204ENST00000475344 FOXD4L3Q6VB84 417 aaPredicted RBP8.87□□□□□ -0.99
LTN1-204ENST00000475344 ADAM19Q9H013 955 aa8.87□□□□□ -0.99
LTN1-204ENST00000475344 ZFYVE28Q9HCC9 887 aa8.87□□□□□ -0.99
LTN1-204ENST00000475344 KCNK4Q9NYG8 393 aa8.87□□□□□ -0.99
LTN1-204ENST00000475344 DDX3YO15523 660 aaKnown RBP8.86□□□□□ -0.99
LTN1-204ENST00000475344 WISP1O95388 367 aa8.86□□□□□ -0.99
LTN1-204ENST00000475344 GLB1P16278 677 aa8.86□□□□□ -0.99
LTN1-204ENST00000475344 ITGB7P26010 798 aa8.86□□□□□ -0.99
LTN1-204ENST00000475344 ACAD11Q709F0 780 aa8.86□□□□□ -0.99
LTN1-204ENST00000475344 TMEM102Q8N9M5 508 aaPredicted RBP8.86□□□□□ -0.99
LTN1-204ENST00000475344 KLHDC7BQ96G42 594 aa8.86□□□□□ -0.99
LTN1-204ENST00000475344 SEC31BQ9NQW1 1179 aa8.86□□□□□ -0.99
LTN1-204ENST00000475344 DUOXA2Q1HG44 320 aa8.85□□□□□ -0.99
LTN1-204ENST00000475344 KLHL23Q8NBE8 558 aa8.85□□□□□ -0.99
LTN1-204ENST00000475344 NXPE3Q969Y0 559 aa8.85□□□□□ -0.99
LTN1-204ENST00000475344 BIN2Q9UBW5 565 aaPredicted RBP8.85□□□□□ -0.99
LTN1-204ENST00000475344 NLRP12P59046 1061 aa8.84□□□□□ -0.99
LTN1-204ENST00000475344 PDE3BQ13370 1112 aa8.84□□□□□ -0.99
LTN1-204ENST00000475344 PEAR1Q5VY43 1037 aaPredicted RBP8.84□□□□□ -0.99
LTN1-204ENST00000475344 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.84□□□□□ -0.99
LTN1-204ENST00000475344 TMEM130Q8N3G9 435 aa8.84□□□□□ -0.99
LTN1-204ENST00000475344 SSBP4Q9BWG4 385 aaPredicted RBP8.84□□□□□ -0.99
LTN1-204ENST00000475344 ARL4DP49703 201 aa8.83□□□□□ -1
LTN1-204ENST00000475344 PIP4K2BP78356 416 aa8.83□□□□□ -1
LTN1-204ENST00000475344 ORC1Q13415 861 aa8.83□□□□□ -1
LTN1-204ENST00000475344 PRSS36Q5K4E3 855 aa8.83□□□□□ -1
LTN1-204ENST00000475344 USPL1Q5W0Q7 1092 aa8.83□□□□□ -1
LTN1-204ENST00000475344 FOXD4L4Q8WXT5 416 aaPredicted RBP8.83□□□□□ -1
LTN1-204ENST00000475344 BSNDQ8WZ55 320 aa8.83□□□□□ -1
LTN1-204ENST00000475344 SOX13Q9UN79 622 aa8.83□□□□□ -1
LTN1-204ENST00000475344 METTL12A8MUP2 240 aa8.82□□□□□ -1
LTN1-204ENST00000475344 NEFLP07196 543 aa8.82□□□□□ -1
LTN1-204ENST00000475344 H2AFB1P0C5Y9 115 aa8.82□□□□□ -1
LTN1-204ENST00000475344 H2AFB2P0C5Z0 115 aa8.82□□□□□ -1
LTN1-204ENST00000475344 HGSNATQ68CP4 663 aa8.82□□□□□ -1
LTN1-204ENST00000475344 UBASH3BQ8TF42 649 aa8.82□□□□□ -1
LTN1-204ENST00000475344 LOC100996750A0A140TA64 210 aa8.81□□□□□ -1
LTN1-204ENST00000475344 SOWAHDA6NJG2 315 aa8.81□□□□□ -1
LTN1-204ENST00000475344 ADAM11O75078 769 aa8.81□□□□□ -1
LTN1-204ENST00000475344 BRD1O95696 1058 aa8.81□□□□□ -1
LTN1-204ENST00000475344 IKBKEQ14164 716 aa8.81□□□□□ -1
LTN1-204ENST00000475344 ZMYM1Q5SVZ6 1142 aa8.81□□□□□ -1
LTN1-204ENST00000475344 KRTAP4-6Q9BYQ5 205 aa8.81□□□□□ -1
LTN1-204ENST00000475344 NIF3L1Q9GZT8 377 aa8.81□□□□□ -1
LTN1-204ENST00000475344 TM4SF5O14894 197 aa8.8□□□□□ -1
LTN1-204ENST00000475344 C19orf57Q0VDD7 668 aa8.8□□□□□ -1
LTN1-204ENST00000475344 FAM129BQ96TA1 746 aa8.8□□□□□ -1
LTN1-204ENST00000475344 OSGEPQ9NPF4 335 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 1307 ms