RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 TMEM232C9JQI7 657 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 KCNQ3O43525 872 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 NDUFA8P51970 172 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 TPM4P67936 248 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 ILDR1Q86SU0 546 aaPredicted RBP9.24□□□□□ -0.93
TPM3-215ENST00000469717 TXLNBQ8N3L3 684 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 IRX2Q9BZI1 471 aaPredicted RBP9.24□□□□□ -0.93
TPM3-215ENST00000469717 ADAM21Q9UKJ8 722 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 MAP3K5Q99683 1374 aa9.23□□□□□ -0.93
TPM3-215ENST00000469717 CWF19L2Q2TBE0 894 aaKnown RBP9.23□□□□□ -0.93
TPM3-215ENST00000469717 USHBP1Q8N6Y0 703 aa9.23□□□□□ -0.93
TPM3-215ENST00000469717 GSDMDP57764 484 aa9.23□□□□□ -0.93
TPM3-215ENST00000469717 UBXN6Q9BZV1 441 aa9.23□□□□□ -0.93
TPM3-215ENST00000469717 ARGLU1Q9NWB6 273 aaPredicted RBP9.23□□□□□ -0.93
TPM3-215ENST00000469717 KCNG1Q9UIX4 513 aa9.23□□□□□ -0.93
TPM3-215ENST00000469717 RRP15Q9Y3B9 282 aaKnown RBP9.23□□□□□ -0.93
TPM3-215ENST00000469717 CTDNEP1O95476 244 aa9.23□□□□□ -0.93
TPM3-215ENST00000469717 PSMA5P28066 241 aa9.23□□□□□ -0.93
TPM3-215ENST00000469717 FAM193AP78312 1265 aa9.23□□□□□ -0.93
TPM3-215ENST00000469717 MUM1L1Q5H9M0 696 aa9.23□□□□□ -0.93
TPM3-215ENST00000469717 RNF20Q5VTR2 975 aa9.23□□□□□ -0.93
TPM3-215ENST00000469717 PEAK1Q9H792 1746 aa9.23□□□□□ -0.93
TPM3-215ENST00000469717 A0A0U1RQJ8 604 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 FAM160A1Q05DH4 1040 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 CHRNA2Q15822 529 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 SRLQ86TD4 932 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 RAB11FIP4Q86YS3 637 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 ATRIPQ8WXE1 791 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 EVI5LQ96CN4 794 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 PARD6BQ9BYG5 372 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 PCDHA7Q9UN72 937 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 LOC102724159A0A0B4J2E5 919 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 PHACTR2O75167 634 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 SASH1O94885 1247 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 APPP05067 770 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 POLR3DP05423 398 aaPredicted RBP9.22□□□□□ -0.93
TPM3-215ENST00000469717 APOBRQ0VD83 1088 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 MCM6Q14566 821 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 PWP2Q15269 919 aaKnown RBP9.22□□□□□ -0.93
TPM3-215ENST00000469717 BEND3Q5T5X7 828 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 FUT8Q9BYC5 575 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 PRDM11Q9NQV5 511 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 CFAP45Q9UL16 551 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 TTC41PQ6P2S7 1318 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 KIF2AO00139 706 aaPredicted RBP9.22□□□□□ -0.93
TPM3-215ENST00000469717 CASQ1P31415 396 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 NCAPHQ15003 741 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 DESI2Q9BSY9 194 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 RCOR1Q9UKL0 485 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 NEDD4P46934 1319 aa9.22□□□□□ -0.93
TPM3-215ENST00000469717 CEP170BQ9Y4F5 1589 aaPredicted RBP9.22□□□□□ -0.93
TPM3-215ENST00000469717 PSDA5PKW4 1024 aaPredicted RBP9.21□□□□□ -0.93
TPM3-215ENST00000469717 VWA3AA6NCI4 1184 aa9.21□□□□□ -0.93
TPM3-215ENST00000469717 PATL2C9JE40 543 aaKnown RBP9.21□□□□□ -0.93
TPM3-215ENST00000469717 SART3Q15020 963 aaKnown RBP9.21□□□□□ -0.93
TPM3-215ENST00000469717 PACS2Q86VP3 889 aa9.21□□□□□ -0.93
TPM3-215ENST00000469717 VPS18Q9P253 973 aa9.21□□□□□ -0.93
TPM3-215ENST00000469717 FAM208AQ9UK61 1670 aaKnown RBP9.21□□□□□ -0.93
TPM3-215ENST00000469717 PTPDC1A2A3K4 754 aa9.21□□□□□ -0.93
TPM3-215ENST00000469717 KARSQ15046 597 aaKnown RBP9.21□□□□□ -0.93
TPM3-215ENST00000469717 STOX1Q6ZVD7 989 aa9.21□□□□□ -0.93
TPM3-215ENST00000469717 TICAM2Q86XR7 235 aa9.21□□□□□ -0.93
TPM3-215ENST00000469717 FMR1NBQ8N0W7 255 aaPredicted RBP9.21□□□□□ -0.93
TPM3-215ENST00000469717 HSD3B7Q9H2F3 369 aa9.21□□□□□ -0.93
TPM3-215ENST00000469717 ARHGEF10O15013 1369 aa9.21□□□□□ -0.93
TPM3-215ENST00000469717 METP08581 1390 aa9.21□□□□□ -0.93
TPM3-215ENST00000469717 CAVIN2O95810 425 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 ACEP12821 1306 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 GNG11P61952 73 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 FANCCQ00597 558 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 CREBRFQ8IUR6 639 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 NSUN7Q8NE18 718 aaKnown RBP9.21□□□□□ -0.94
TPM3-215ENST00000469717 DNAAF4Q8WXU2 420 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 DLC1Q96QB1 1528 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 TSPYL1Q9H0U9 437 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 PDE11AQ9HCR9 933 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 GPHNQ9NQX3 736 aaPredicted RBP9.21□□□□□ -0.94
TPM3-215ENST00000469717 KCND1Q9NSA2 647 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 CLIC4Q9Y696 253 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 TMEM131LA2VDJ0 1609 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 UBAP1LF5GYI3 381 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 TAF5LO75529 589 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 CYP21A2P08686 494 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 CCDC150Q8NCX0 1101 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 DHX58Q96C10 678 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 NEK1Q96PY6 1258 aa9.21□□□□□ -0.94
TPM3-215ENST00000469717 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.21□□□□□ -0.94
TPM3-215ENST00000469717 USP42Q9H9J4 1324 aaKnown RBP9.2□□□□□ -0.94
TPM3-215ENST00000469717 ANKRD1Q15327 319 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 E2F4Q16254 413 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 FBXO18Q8NFZ0 1043 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 DRC1Q96MC2 740 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 KIAA1468Q9P260 1216 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 PHF8Q9UPP1 1060 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 EFCAB8A8MWE9 144 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 GTF2A1P52655 376 aaPredicted RBP9.2□□□□□ -0.94
TPM3-215ENST00000469717 PPP2R3AQ06190 1150 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 LONRF2Q1L5Z9 754 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 PROSER3Q2NL68 480 aa9.2□□□□□ -0.94
TPM3-215ENST00000469717 LRRFIP1Q32MZ4 808 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms